SRR1545089_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545089_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1582883
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10931	0.6905753615396716	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGTACG	20	7.0340926E-4	45.000004	1
GGTCGTA	20	7.0340926E-4	45.000004	25
GGTCGAA	20	7.0340926E-4	45.000004	26
ATTACGC	20	7.0340926E-4	45.000004	12
TCGTGAT	20	7.0340926E-4	45.000004	44
CGTCCCA	40	6.8175723E-9	45.000004	19
TCGACTT	20	7.0340926E-4	45.000004	23
TACCGTA	40	6.8175723E-9	45.000004	20
AATCGCC	20	7.0340926E-4	45.000004	42
TACGTAG	20	7.0340926E-4	45.000004	1
AACGTAC	25	3.8914746E-5	45.0	7
CACGGTC	25	3.8914746E-5	45.0	20
CGTGCTA	25	3.8914746E-5	45.0	10
CGTTAAA	45	3.8562575E-10	45.0	32
AAACGCG	55	1.8189894E-12	45.0	1
TATAGCG	75	0.0	45.0	1
ACCGTAA	45	3.8562575E-10	45.0	21
ATCGGGT	45	3.8562575E-10	45.0	2
GACTACG	35	1.21232E-7	45.0	1
CGTTTTT	7735	0.0	42.702003	1