##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545089_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1582883 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.93535592965494 31.0 31.0 33.0 30.0 33.0 2 31.260550527107814 31.0 31.0 33.0 30.0 34.0 3 31.372325054978795 31.0 31.0 34.0 30.0 34.0 4 35.24457461480097 37.0 35.0 37.0 33.0 37.0 5 35.16195006200711 37.0 35.0 37.0 32.0 37.0 6 35.22576716030181 37.0 35.0 37.0 32.0 37.0 7 35.560585968767114 36.0 35.0 37.0 35.0 37.0 8 35.621497609109454 37.0 35.0 37.0 35.0 37.0 9 37.45431595386393 39.0 37.0 39.0 35.0 39.0 10 36.98472028570652 39.0 37.0 39.0 33.0 39.0 11 36.594256176862096 39.0 35.0 39.0 32.0 39.0 12 35.466377489681804 37.0 35.0 39.0 31.0 39.0 13 35.07757553780033 37.0 35.0 39.0 30.0 39.0 14 35.770213591276175 37.0 34.0 40.0 30.0 41.0 15 36.161229225407055 37.0 35.0 40.0 31.0 41.0 16 36.28679125368078 37.0 35.0 40.0 32.0 41.0 17 36.11693094183209 36.0 34.0 40.0 31.0 41.0 18 36.16382575338796 36.0 35.0 40.0 31.0 41.0 19 36.056906290610236 36.0 35.0 40.0 31.0 41.0 20 35.79411238859726 36.0 34.0 40.0 31.0 41.0 21 35.67398853863488 35.0 34.0 40.0 30.0 41.0 22 35.523274935671175 35.0 34.0 40.0 30.0 41.0 23 35.437002608531394 35.0 34.0 40.0 30.0 41.0 24 35.517817172842214 35.0 34.0 40.0 30.0 41.0 25 35.385518070508056 35.0 34.0 40.0 30.0 41.0 26 35.148292703882724 35.0 34.0 39.0 29.0 41.0 27 35.127016336646484 35.0 34.0 40.0 29.0 41.0 28 35.19687241571234 36.0 34.0 40.0 29.0 41.0 29 35.17914400495804 36.0 34.0 40.0 29.0 41.0 30 35.14245209532227 36.0 34.0 40.0 29.0 41.0 31 34.92446946489412 35.0 34.0 40.0 29.0 41.0 32 34.77362571965205 35.0 34.0 40.0 29.0 41.0 33 34.50156644553009 35.0 33.0 40.0 27.0 41.0 34 34.26918350882535 35.0 34.0 40.0 25.0 41.0 35 34.02769629846299 35.0 33.0 40.0 24.0 41.0 36 33.787134614497724 35.0 33.0 40.0 23.0 41.0 37 33.825043923018946 35.0 33.0 40.0 23.0 41.0 38 33.842306727660855 35.0 33.0 40.0 23.0 41.0 39 33.81573875011608 35.0 33.0 40.0 23.0 41.0 40 33.552538627302205 35.0 33.0 40.0 23.0 41.0 41 33.57171439708431 35.0 33.0 40.0 23.0 41.0 42 33.549110073201874 35.0 33.0 40.0 23.0 41.0 43 33.51099038905592 35.0 33.0 40.0 23.0 41.0 44 33.47187694858053 35.0 33.0 39.0 23.0 41.0 45 33.50251850578975 35.0 33.0 39.0 23.0 41.0 46 33.53577870253203 35.0 33.0 39.0 23.0 41.0 47 33.4739048937919 35.0 33.0 39.0 23.0 41.0 48 33.52430280696678 35.0 33.0 39.0 23.0 41.0 49 33.558556128279854 35.0 33.0 39.0 23.0 41.0 50 33.37379389380011 35.0 33.0 39.0 23.0 41.0 51 33.087736111892035 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 0.0 11 4.0 12 4.0 13 16.0 14 13.0 15 49.0 16 122.0 17 370.0 18 852.0 19 1705.0 20 3200.0 21 5346.0 22 8097.0 23 12384.0 24 17652.0 25 24188.0 26 31288.0 27 35351.0 28 37952.0 29 42248.0 30 50277.0 31 61238.0 32 78508.0 33 103885.0 34 183618.0 35 266149.0 36 98917.0 37 120680.0 38 173218.0 39 225481.0 40 68.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.666332887522326 24.360802409274722 28.624857301518812 15.348007401684141 2 32.57006361177674 25.236609401958326 30.04587199432933 12.1474549919356 3 28.094180049946836 25.165410204039084 34.11932530705049 12.621084438963587 4 24.6706168428115 27.84634113829007 33.67589392267148 13.807148096226948 5 22.38800972655591 31.53101018837147 32.41243983288721 13.66854025218541 6 21.085702480852973 38.686371639596864 30.874549793004284 9.353376086545879 7 84.19598921714365 4.793089571370721 9.279965733411757 1.730955478073869 8 85.95006706117887 3.503607025914107 8.967687441206962 1.5786384717000561 9 81.93644129098612 4.926516994623102 10.414225182783566 2.7228165316072004 10 55.08947913396 21.21173832810132 15.911157046983258 7.787625490955427 11 49.51755752004412 18.79936798866372 22.657265255865404 9.02580923542675 12 44.495581796001346 22.125829893934043 23.563965245694092 9.814623064370519 13 18.201850673738996 47.54577565113783 23.397117790765332 10.855255884357847 14 11.162922338543027 46.60363400200772 29.941505468186847 12.291938191262398 15 10.266709542019214 23.467116647282204 55.219431884731854 11.046741925966733 16 11.811169871683504 18.331045314151456 52.37007409897004 17.487710715194996 17 12.357514737349508 18.53920978366689 32.86294691395384 36.24032856502976 18 17.537114240281817 21.86756696483568 43.72502579154619 16.870293003336318 19 31.354244122907378 20.855173755735578 29.683179363225204 18.107402758131837 20 31.246087044967947 21.825428664026337 31.182532126505873 15.74595216449984 21 17.47507554253852 33.436141521514855 32.007798428563575 17.08098450738305 22 19.151699778189542 23.904672676375956 25.94083074996699 31.002796795467514 23 13.76519932300745 33.235937210773 28.99203541891599 24.00682804730356 24 12.272606377097992 21.395201035073345 52.46073146278025 13.871461125048409 25 11.922106687607359 26.124293456939018 46.119454185811584 15.834145669642039 26 11.631687244098268 40.58145801047835 29.752546461109254 18.03430828431413 27 10.881031636577056 45.570519109751004 30.004997210785632 13.543452042886303 28 10.705655440105174 32.24584508141158 43.82035816923929 13.228141309243954 29 11.162353755773484 25.708406748951123 42.105638888029 21.023600607246397 30 14.981081987740092 39.875657265887625 31.524818953769802 13.618441792602484 31 30.345136058697957 29.596817958118194 28.143962630213355 11.914083352970497 32 34.02847841565043 22.874337522103655 30.147964189393655 12.949219872852257 33 32.91721498051341 27.218373057263236 24.005564530037912 15.85884743218545 34 18.83973736530116 26.011650892706534 27.29740606222949 27.851205679762813 35 18.75811414994033 25.45507153718879 35.90972927247308 19.877085040397805 36 34.161400431996555 27.468107244818473 25.341354983280507 13.029137339904464 37 16.681397172122008 42.726089041325224 28.252940994375454 12.33957279217731 38 16.489532075333425 41.37406239121906 25.082460295549325 17.05394523789819 39 19.121375363814003 38.90931926112037 27.70255287345938 14.266752501606247 40 26.914939385917975 24.674975977377986 26.980263228551955 21.429821408152087 41 14.368844696670568 24.386704513220497 28.713998444610244 32.53045234549869 42 16.016092155895286 22.464768400443997 27.732182353338814 33.7869570903219 43 16.52042507247851 23.33154124467822 30.432192398301073 29.715841284542194 44 13.568596036472687 30.33913435168613 35.7465460176147 20.345723594226484 45 13.160479959668528 48.36630376344935 23.74888099752161 14.72433527936051 46 17.62120131431066 41.20058147064565 25.176845035293194 16.001372179750494 47 16.32274779626795 29.970503189433455 27.887594977013464 25.81915403728513 48 17.71950295757804 27.23239809891192 39.56306309436642 15.48503584914362 49 20.426399171638078 27.931944433037692 38.17660559877136 13.465050796552871 50 17.812118773150004 42.26225185310601 26.22171063812044 13.703918735623544 51 15.713732474225829 38.93117810981608 26.469739077367056 18.88535033859104 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1561.0 1 2461.0 2 3361.0 3 11450.0 4 19539.0 5 14682.5 6 9826.0 7 10016.5 8 10207.0 9 10606.0 10 11005.0 11 11082.5 12 11160.0 13 10825.5 14 10491.0 15 10112.5 16 9734.0 17 9241.5 18 8749.0 19 8504.0 20 8259.0 21 8900.5 22 9542.0 23 10253.0 24 10964.0 25 12931.5 26 17276.0 27 19653.0 28 25475.0 29 31297.0 30 37118.0 31 42939.0 32 47282.5 33 51626.0 34 61776.5 35 71927.0 36 76602.0 37 81277.0 38 90523.0 39 99769.0 40 137450.0 41 175131.0 42 196757.5 43 218384.0 44 205910.5 45 193437.0 46 165215.0 47 136993.0 48 117329.0 49 97665.0 50 81808.0 51 65951.0 52 53415.5 53 40880.0 54 33386.0 55 25892.0 56 22830.0 57 19768.0 58 18597.0 59 17426.0 60 15645.0 61 13864.0 62 12674.0 63 11484.0 64 10078.0 65 8672.0 66 7657.0 67 6642.0 68 5578.5 69 4515.0 70 3724.5 71 2934.0 72 2790.0 73 2646.0 74 2074.5 75 992.5 76 482.0 77 428.5 78 375.0 79 267.5 80 160.0 81 166.5 82 173.0 83 115.0 84 57.0 85 47.5 86 38.0 87 26.5 88 15.0 89 11.0 90 7.0 91 5.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1582883.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.363274259609337 #Duplication Level Percentage of deduplicated Percentage of total 1 79.5601605914163 14.609850490787405 2 6.320641190945466 2.3213533537183078 3 2.4259508727276033 1.3364520364870685 4 1.5281423082035845 1.1224678525301954 5 1.054712353728131 0.9683986108253886 6 0.8263495362892646 0.9104689901508459 7 0.6511996336211731 0.8370710228959903 8 0.5435305743780394 0.7984800804629544 9 0.431556966101773 0.713231903445461 >10 4.279112307200589 16.541373536201384 >50 0.9428267116472708 12.638200678285468 >100 1.423733858434098 45.052964298428 >500 0.01035693883438954 1.157353166810799 >1k 0.0013809251779186053 0.2993548232734768 >5k 0.0 0.0 >10k+ 3.452312944796513E-4 0.6929791556972417 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10931 0.6905753615396716 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.009413203629074291 0.0 2 0.0 0.0 0.0 0.04258053185232263 0.0 3 0.0 0.0 0.0 0.06545019436054339 0.0 4 0.0 0.0 0.0 0.10676720894721846 0.0 5 0.0 0.0 0.0 0.2204205869922161 0.0 6 0.0 0.0 0.0 0.3199857475252435 0.0 7 0.0 0.0 0.0 0.39402785929219025 0.0 8 0.0 0.0 0.0 0.5412276207401305 0.0 9 0.0 0.0 0.0 0.6060460564678501 0.0 10 6.317586328237778E-5 0.0 0.0 0.7311342657669582 0.0 11 6.317586328237778E-5 0.0 0.0 0.8250135986045716 0.0 12 6.317586328237778E-5 0.0 0.0 0.9176294141765373 0.0 13 6.317586328237778E-5 0.0 0.0 0.9561035149155055 0.0 14 6.317586328237778E-5 0.0 0.0 0.9718974807360999 0.0 15 6.317586328237778E-5 0.0 0.0 1.0003897950764522 0.0 16 6.317586328237778E-5 0.0 0.0 1.0475821649483885 0.0 17 6.317586328237778E-5 0.0 0.0 1.101344824601692 0.0 18 6.317586328237778E-5 0.0 0.0 1.1826521606461122 0.0 19 6.317586328237778E-5 0.0 0.0 1.2230215372835516 0.0 20 6.317586328237778E-5 0.0 0.0 1.2673078174444985 0.0 21 6.317586328237778E-5 0.0 0.0 1.3299150979573349 0.0 22 6.317586328237778E-5 0.0 0.0 1.3920169715639121 0.0 23 6.317586328237778E-5 0.0 0.0 1.4668171936902474 0.0 24 6.317586328237778E-5 0.0 0.0 1.524623108593623 0.0 25 6.317586328237778E-5 0.0 0.0 1.572763116414795 0.0 26 6.317586328237778E-5 0.0 0.0 1.6258940174352747 0.0 27 6.317586328237778E-5 0.0 0.0 1.6793407977721664 0.0 28 6.317586328237778E-5 0.0 0.0 1.733798391921576 0.0 29 6.317586328237778E-5 0.0 0.0 1.8003225759579198 0.0 30 6.317586328237778E-5 0.0 0.0 1.8959076571041573 0.0 31 6.317586328237778E-5 0.0 0.0 1.975130189660259 0.0 32 6.317586328237778E-5 0.0 0.0 2.0467716186224756 0.0 33 6.317586328237778E-5 0.0 0.0 2.120055620030034 0.0 34 6.317586328237778E-5 0.0 0.0 2.2016156595275835 0.0 35 6.317586328237778E-5 0.0 0.0 2.3170379617444876 0.0 36 6.317586328237778E-5 0.0 0.0 2.402199025449133 0.0 37 6.317586328237778E-5 0.0 0.0 2.490139827138203 0.0 38 6.317586328237778E-5 0.0 0.0 2.6016452258315996 0.0 39 6.317586328237778E-5 0.0 0.0 2.752382835623353 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGTACG 20 7.0340926E-4 45.000004 1 GGTCGTA 20 7.0340926E-4 45.000004 25 GGTCGAA 20 7.0340926E-4 45.000004 26 ATTACGC 20 7.0340926E-4 45.000004 12 TCGTGAT 20 7.0340926E-4 45.000004 44 CGTCCCA 40 6.8175723E-9 45.000004 19 TCGACTT 20 7.0340926E-4 45.000004 23 TACCGTA 40 6.8175723E-9 45.000004 20 AATCGCC 20 7.0340926E-4 45.000004 42 TACGTAG 20 7.0340926E-4 45.000004 1 AACGTAC 25 3.8914746E-5 45.0 7 CACGGTC 25 3.8914746E-5 45.0 20 CGTGCTA 25 3.8914746E-5 45.0 10 CGTTAAA 45 3.8562575E-10 45.0 32 AAACGCG 55 1.8189894E-12 45.0 1 TATAGCG 75 0.0 45.0 1 ACCGTAA 45 3.8562575E-10 45.0 21 ATCGGGT 45 3.8562575E-10 45.0 2 GACTACG 35 1.21232E-7 45.0 1 CGTTTTT 7735 0.0 42.702003 1 >>END_MODULE