##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545088_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2329382 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.01563590686285 31.0 31.0 33.0 30.0 33.0 2 31.3408105669229 31.0 31.0 33.0 30.0 34.0 3 31.50772307848176 31.0 31.0 34.0 30.0 34.0 4 35.3580228575648 37.0 35.0 37.0 33.0 37.0 5 35.25646373158202 37.0 35.0 37.0 33.0 37.0 6 35.33098435550717 37.0 35.0 37.0 33.0 37.0 7 35.64271596500703 36.0 35.0 37.0 35.0 37.0 8 35.70882620368836 37.0 35.0 37.0 35.0 37.0 9 37.61976438385803 39.0 37.0 39.0 35.0 39.0 10 37.18203411892081 39.0 37.0 39.0 33.0 39.0 11 36.657051956269946 39.0 35.0 39.0 32.0 39.0 12 34.92785511350221 35.0 35.0 39.0 31.0 39.0 13 34.369742274989676 35.0 33.0 39.0 27.0 39.0 14 34.927712586428505 35.0 33.0 40.0 27.0 41.0 15 35.48207936697373 35.0 34.0 40.0 31.0 41.0 16 35.750131579964126 35.0 34.0 40.0 32.0 41.0 17 35.662526369655126 35.0 34.0 40.0 31.0 41.0 18 35.810298182092936 36.0 35.0 39.0 31.0 41.0 19 35.66336478945918 36.0 35.0 39.0 31.0 41.0 20 35.344187428253505 35.0 34.0 39.0 31.0 41.0 21 35.17058172510992 35.0 34.0 39.0 30.0 41.0 22 35.000938017036276 35.0 34.0 39.0 30.0 41.0 23 35.00229417072855 35.0 34.0 39.0 30.0 41.0 24 35.147609966935434 35.0 34.0 39.0 31.0 41.0 25 35.053901850362024 35.0 34.0 39.0 31.0 41.0 26 34.836009293452086 35.0 34.0 38.0 30.0 41.0 27 34.806414319334486 35.0 34.0 38.0 30.0 41.0 28 34.99248598984624 35.0 34.0 38.0 30.0 41.0 29 35.02370371197167 35.0 34.0 38.0 30.0 41.0 30 34.98751256771109 35.0 34.0 38.0 30.0 41.0 31 34.65313975981612 35.0 34.0 38.0 29.0 41.0 32 34.48810457022506 35.0 34.0 38.0 29.0 41.0 33 34.264673205167725 35.0 33.0 38.0 28.0 41.0 34 34.11783339958839 35.0 34.0 38.0 27.0 41.0 35 33.90807905272729 35.0 33.0 38.0 27.0 41.0 36 33.59543217900713 35.0 33.0 38.0 23.0 41.0 37 33.620866822187175 35.0 33.0 38.0 24.0 41.0 38 33.71169821008319 35.0 33.0 38.0 26.0 41.0 39 33.72148836043208 35.0 33.0 38.0 25.0 41.0 40 33.40552816154671 35.0 33.0 38.0 23.0 41.0 41 33.5527066835753 35.0 33.0 38.0 23.0 41.0 42 33.538218720673555 35.0 33.0 38.0 23.0 41.0 43 33.50074354485439 35.0 33.0 38.0 24.0 41.0 44 33.48613623699333 35.0 33.0 38.0 23.0 41.0 45 33.550847392140916 35.0 33.0 38.0 24.0 41.0 46 33.58324697280223 35.0 33.0 38.0 24.0 41.0 47 33.5499372795016 35.0 33.0 38.0 24.0 41.0 48 33.60584180696854 35.0 33.0 38.0 24.0 41.0 49 33.70195828764883 35.0 33.0 38.0 24.0 40.0 50 33.42833335193627 35.0 33.0 38.0 24.0 40.0 51 33.103586702395745 35.0 32.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 0.0 11 2.0 12 4.0 13 2.0 14 10.0 15 34.0 16 121.0 17 363.0 18 1006.0 19 2073.0 20 3745.0 21 6457.0 22 10245.0 23 14895.0 24 22312.0 25 31653.0 26 41083.0 27 47643.0 28 53137.0 29 60985.0 30 74390.0 31 93412.0 32 123453.0 33 169478.0 34 337998.0 35 523186.0 36 109395.0 37 130644.0 38 190698.0 39 280787.0 40 168.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.862341170318995 24.95417239422302 32.37365103705618 12.809835398401809 2 29.500528466348584 25.151349156128106 32.80217671468226 12.545945662841046 3 26.805693527296082 26.11186142934049 34.733246844012704 12.34919819935073 4 24.764079056161677 28.308881926622597 33.57371182571171 13.353327191504013 5 21.654627708121723 32.785477006347605 33.23448021835835 12.325415067172322 6 20.56322234824516 40.86096655679489 28.913377024463998 9.662434070495951 7 87.57756349108905 4.944873790559041 6.203405023306611 1.2741576950452953 8 91.27764359817326 2.2911227098002818 5.613205562677139 0.8180281293493294 9 88.73941672082981 3.2324453438723233 6.594195370274175 1.4339425650236846 10 70.65620838488492 15.249838798445253 9.720346426648785 4.373606390021044 11 66.09817539587753 12.776521841415448 15.229532983426505 5.8957697792805135 12 57.291805294279776 21.08456234314509 15.459679863586137 6.163952498989002 13 16.605434402772925 60.049875889828286 16.436076178145104 6.908613529253682 14 7.693628610506993 58.20462251361091 25.544285995169535 8.557462880712567 15 6.137421856956051 20.447741074671306 65.39039109944183 8.024445968930817 16 6.969230465419583 13.695263378870449 62.42308045653311 16.912425699176865 17 7.568015894344509 13.469581202224454 31.612333228298322 47.350069675132715 18 15.747181011959396 19.03414725450785 49.17235558615976 16.046316147372995 19 37.241508692005006 16.045028252128677 27.16098089536195 19.552482160504375 20 36.00916466255857 18.410977675623837 29.398613022681552 16.181244639136043 21 15.301225818693542 36.00354085332504 31.24073252047109 17.454500807510318 22 18.958934172239676 23.516580792673768 19.77657593301571 37.74790910207085 23 10.462345806741874 35.94090621460971 25.538919764984875 28.057828213663537 24 8.84852720592844 17.768575527758006 61.81558026978829 11.567316996525259 25 7.354783371726921 23.59647322766296 54.56623258872955 14.482510811880575 26 7.41514272884396 45.79703972985109 28.948665354158315 17.839152187146635 27 6.850829962625279 55.553704802389646 26.80805466857733 10.787410566407743 28 6.100845632017419 35.38221725762455 47.17379974602706 11.343137364330968 29 7.280471816129771 25.275888626253657 45.00640083936426 22.43723871825231 30 14.143064555319823 46.56119090814646 27.126722881863085 12.169021654670638 31 37.00668245912435 30.61949478445356 23.49155269509252 8.88227006132957 32 41.26824196288973 19.331736915628266 29.380067331163374 10.019953790318633 33 39.556371604142214 25.799203393861546 19.188050736203852 15.456374265792386 34 18.63159413097551 25.4272592473025 23.568912269434552 32.372234352287435 35 18.043369443053994 22.348846174650618 38.16201035296057 21.445774029334817 36 42.811183395424194 24.413170531926493 21.377000423288237 11.398645649361075 37 15.079235608414592 48.05987167411786 27.019527067694348 9.8413656497732 38 15.053821142260048 46.72565513084586 20.64281427434401 17.577709452550074 39 19.254119762237366 42.046903427604406 25.61378940852123 13.085187401637 40 31.02668433086544 21.115085460435427 22.632140198559103 25.22609001014003 41 12.077666952007013 20.938686741805338 26.697553256614842 40.286093049572806 42 14.517584492367503 16.747618037745635 26.89975280997277 41.83504465991409 43 14.22574743000504 18.249132173254537 31.682609378796606 35.84251101794382 44 9.861370955901608 30.052949666478064 38.366613977441226 21.7190654001791 45 9.794657982245933 57.75922540828425 19.479973658249268 12.966142951220538 46 18.212856457206247 45.54581429752613 21.12259818269395 15.118731062573678 47 15.944357773864484 29.48129589736677 24.731624096004865 29.842722232763887 48 16.34205982530989 26.58121338621145 43.62105485489284 13.455671933585819 49 22.563581241719906 26.10752551535128 40.156487858152936 11.172405384775876 50 19.356249855111784 47.9855601185207 21.373523106128577 11.28466692023893 51 14.807103343290196 42.56261961327081 23.4642063860715 19.16607065736749 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2529.0 1 3140.0 2 3751.0 3 8359.5 4 12968.0 5 10671.5 6 8375.0 7 9380.0 8 10385.0 9 11289.0 10 12193.0 11 12374.0 12 12555.0 13 12371.0 14 12187.0 15 11205.5 16 10224.0 17 9957.0 18 9690.0 19 9185.0 20 8680.0 21 8848.0 22 9016.0 23 9830.0 24 10644.0 25 11844.0 26 15404.5 27 17765.0 28 22929.5 29 28094.0 30 34659.0 31 41224.0 32 52557.5 33 63891.0 34 72398.0 35 80905.0 36 85000.5 37 89096.0 38 115185.5 39 141275.0 40 224909.0 41 308543.0 42 376514.0 43 444485.0 44 408684.5 45 372884.0 46 305420.0 47 237956.0 48 195175.0 49 152394.0 50 122598.5 51 92803.0 52 71933.5 53 51064.0 54 36970.0 55 22876.0 56 18157.5 57 13439.0 58 11365.0 59 9291.0 60 8585.5 61 7880.0 62 6577.0 63 5274.0 64 4641.5 65 4009.0 66 3291.5 67 2574.0 68 2252.5 69 1931.0 70 1616.5 71 1302.0 72 1163.0 73 1024.0 74 801.0 75 453.5 76 329.0 77 236.0 78 143.0 79 106.5 80 70.0 81 45.0 82 20.0 83 17.0 84 14.0 85 9.0 86 4.0 87 2.5 88 1.0 89 1.0 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2329382.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.532164125753908 #Duplication Level Percentage of deduplicated Percentage of total 1 80.17763447588088 10.84976908942325 2 7.791714807841907 2.108775272015675 3 2.6358914287177533 1.0700794629322978 4 1.3703306027303 0.7417415449075877 5 0.9311400430558938 0.6300169943346958 6 0.665754241927225 0.5405457401505649 7 0.4977548462975314 0.47149901921413234 8 0.3951384893132897 0.42776631118319147 9 0.3397679829399043 0.4138016498837225 >10 3.0765254464713507 8.68922845359746 >50 0.505703014404489 4.865822143865717 >100 1.439087883032301 51.93957362094793 >500 0.15126504634660767 13.15503749811927 >1k 0.021973238311401955 3.8211478148497346 >5k 3.1845272915075295E-4 0.275195384574781 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6386 0.2741499676738294 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2941 0.1262566637846433 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.017772954371588687 0.0 2 0.0 0.0 0.0 0.06709934222896889 0.0 3 0.0 0.0 0.0 0.09354412457896558 0.0 4 0.0 0.0 0.0 0.13115066571305178 0.0 5 0.0 0.0 0.0 0.2200583674124725 0.0 6 0.0 0.0 0.0 0.30218315415848496 0.0 7 0.0 0.0 0.0 0.3626713007999547 0.0 8 0.0 0.0 0.0 0.501291758930051 0.0 9 0.0 0.0 0.0 0.5575727811067485 0.0 10 0.0 0.0 0.0 0.6465234126476465 0.0 11 0.0 0.0 0.0 0.7531611388771786 0.0 12 0.0 0.0 0.0 0.8461471755169396 0.0 13 0.0 0.0 0.0 0.8850845417368212 0.0 14 0.0 0.0 0.0 0.898865020851024 0.0 15 0.0 0.0 0.0 0.9220900650902256 0.0 16 0.0 0.0 0.0 0.9795301929868093 0.0 17 0.0 0.0 0.0 1.050450291107255 0.0 18 0.0 0.0 0.0 1.1587622811544007 0.0 19 0.0 0.0 0.0 1.2050835801083721 0.0 20 0.0 0.0 0.0 1.2571574778202974 0.0 21 0.0 0.0 0.0 1.3308250857952881 0.0 22 0.0 0.0 0.0 1.4012729556594838 0.0 23 0.0 0.0 0.0 1.4951605189702677 0.0 24 0.0 0.0 0.0 1.5625174402481001 0.0 25 4.2929841477267364E-5 0.0 0.0 1.6173388478145705 0.0 26 4.2929841477267364E-5 0.0 0.0 1.6760668709554722 0.0 27 4.2929841477267364E-5 0.0 0.0 1.7333782093276242 0.0 28 4.2929841477267364E-5 0.0 0.0 1.7947249527986393 0.0 29 4.2929841477267364E-5 0.0 0.0 1.865473331553176 0.0 30 4.2929841477267364E-5 0.0 0.0 1.967474634903163 0.0 31 4.2929841477267364E-5 0.0 0.0 2.0653546734713326 0.0 32 4.2929841477267364E-5 0.0 0.0 2.1422420195571186 0.0 33 4.2929841477267364E-5 0.0 0.0 2.2212329278752905 0.0 34 4.2929841477267364E-5 0.0 0.0 2.313274508002552 0.0 35 4.2929841477267364E-5 0.0 0.0 2.4587208109275336 0.0 36 4.2929841477267364E-5 0.0 0.0 2.5555276034587715 0.0 37 4.2929841477267364E-5 0.0 0.0 2.649844465184328 0.0 38 4.2929841477267364E-5 0.0 0.0 2.7418001856286347 0.0 39 4.2929841477267364E-5 4.2929841477267364E-5 0.0 2.835473099732032 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCGG 100 0.0 45.000004 2 CTATGCG 85 0.0 45.000004 1 ATCTACG 25 3.892043E-5 45.000004 1 CAACGTA 25 3.892043E-5 45.000004 27 GCGCGTC 25 3.892043E-5 45.000004 38 CGTGACG 25 3.892043E-5 45.000004 19 TCGATAG 75 0.0 45.000004 1 ACGGGCC 25 3.892043E-5 45.000004 5 TATTGCG 270 0.0 45.000004 1 ATTCCCG 25 3.892043E-5 45.000004 45 CCCGTAA 25 3.892043E-5 45.000004 20 TCGTGAC 25 3.892043E-5 45.000004 18 TCTACGA 25 3.892043E-5 45.000004 12 GTATGCG 25 3.892043E-5 45.000004 1 AACGCTC 25 3.892043E-5 45.000004 44 CGCGTCA 25 3.892043E-5 45.000004 39 CGACTCC 25 3.892043E-5 45.000004 23 CGCTTCG 25 3.892043E-5 45.000004 32 TGATCGC 20 7.03478E-4 45.0 21 TTGATCG 20 7.03478E-4 45.0 40 >>END_MODULE