##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545087_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2423760 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.965815097204345 31.0 31.0 33.0 30.0 33.0 2 31.29590842327623 31.0 31.0 33.0 30.0 34.0 3 31.457066293692446 31.0 31.0 34.0 30.0 34.0 4 35.293263771990624 37.0 35.0 37.0 33.0 37.0 5 35.16019407862164 37.0 35.0 37.0 32.0 37.0 6 35.23369310492788 37.0 35.0 37.0 32.0 37.0 7 35.59246872627653 36.0 35.0 37.0 35.0 37.0 8 35.65522081394197 37.0 35.0 37.0 35.0 37.0 9 37.5063409743539 39.0 37.0 39.0 35.0 39.0 10 37.107583259068555 39.0 37.0 39.0 33.0 39.0 11 36.6280419678516 39.0 35.0 39.0 32.0 39.0 12 34.94281818331848 35.0 34.0 39.0 31.0 39.0 13 34.40652333564379 35.0 33.0 39.0 27.0 39.0 14 34.98998580717563 35.0 33.0 40.0 27.0 41.0 15 35.501342542165894 35.0 33.0 40.0 30.0 41.0 16 35.74785911146318 35.0 34.0 40.0 32.0 41.0 17 35.632199557711985 35.0 34.0 40.0 31.0 41.0 18 35.77578019275836 36.0 35.0 39.0 31.0 41.0 19 35.64038766214477 36.0 35.0 39.0 31.0 41.0 20 35.326982457008945 35.0 34.0 39.0 31.0 41.0 21 35.157072482424 35.0 34.0 39.0 30.0 41.0 22 34.988863171271085 35.0 34.0 39.0 30.0 41.0 23 34.99012567250883 35.0 34.0 39.0 30.0 41.0 24 35.09520744628181 35.0 34.0 39.0 30.0 41.0 25 35.01258829257022 35.0 34.0 39.0 30.0 41.0 26 34.79771800838367 35.0 34.0 39.0 29.0 41.0 27 34.760968082648446 35.0 34.0 39.0 29.0 41.0 28 34.91523665709476 35.0 34.0 39.0 29.0 41.0 29 34.95196884179952 36.0 34.0 39.0 29.0 41.0 30 34.923138016965375 36.0 34.0 39.0 29.0 41.0 31 34.613546308215334 35.0 34.0 39.0 29.0 41.0 32 34.43815806845562 35.0 34.0 39.0 29.0 41.0 33 34.20732704558207 35.0 33.0 39.0 27.0 41.0 34 34.05997210944978 35.0 34.0 39.0 27.0 41.0 35 33.85622957718586 35.0 33.0 39.0 25.0 41.0 36 33.55874385252665 35.0 33.0 38.0 23.0 41.0 37 33.60788073076542 35.0 33.0 38.0 23.0 41.0 38 33.68061895567218 35.0 33.0 38.0 24.0 41.0 39 33.70587681948708 35.0 33.0 38.0 24.0 41.0 40 33.34535226260026 35.0 33.0 38.0 23.0 41.0 41 33.49428697560815 35.0 33.0 38.0 23.0 41.0 42 33.48684729511173 35.0 33.0 38.0 23.0 41.0 43 33.458540862131564 35.0 33.0 38.0 23.0 41.0 44 33.43770051490247 35.0 33.0 38.0 23.0 41.0 45 33.50425248374427 35.0 33.0 38.0 23.0 41.0 46 33.55976375548734 35.0 33.0 38.0 23.0 41.0 47 33.50652539855431 35.0 33.0 38.0 23.0 41.0 48 33.56921436115787 35.0 33.0 38.0 23.0 41.0 49 33.637346519457374 35.0 33.0 38.0 24.0 41.0 50 33.38858632867941 35.0 33.0 38.0 24.0 40.0 51 33.08812877512625 35.0 32.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 3.0 11 5.0 12 6.0 13 8.0 14 15.0 15 60.0 16 170.0 17 520.0 18 1224.0 19 2638.0 20 4629.0 21 7648.0 22 11711.0 23 17398.0 24 24823.0 25 34547.0 26 44580.0 27 51520.0 28 57758.0 29 66032.0 30 79606.0 31 99373.0 32 129513.0 33 175580.0 34 338485.0 35 509072.0 36 116488.0 37 142190.0 38 204340.0 39 303641.0 40 174.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.90690497408984 26.341882034524872 31.861075353995442 12.89013763738984 2 29.764786942601578 28.157697131729215 30.546299963692775 11.531215961976434 3 28.050755850414234 26.087525167508335 33.62593656137571 12.23578242070172 4 26.99891903488794 28.50529755421329 31.586625738521967 12.909157672376804 5 22.946908934878042 34.14401590916592 31.03582862989735 11.873246526058685 6 20.78386473908308 42.62080404000396 28.05950259101561 8.535828629897349 7 86.09713833052778 6.106421427864145 6.626192362280094 1.1702478793279862 8 88.96747202693336 3.9811697527808034 6.122677162755388 0.9286810575304486 9 84.55259596659735 6.354837112585404 7.2180001320262726 1.8745667887909694 10 67.15891837475658 16.93389609532297 10.602081064131761 5.305104465788692 11 65.71380829785127 14.186346833019773 14.666716176519126 5.43312869260983 12 56.713866059345804 21.70256130970063 15.882719411162821 5.700853219790739 13 16.133858137769415 60.63178697560815 16.13336303924481 7.100991847377629 14 8.409867313595406 58.80260421823943 24.956101264151567 7.831427204013599 15 8.494983001617323 20.63611908769845 62.84054526850843 8.028352642175793 16 8.749257352213089 15.073810938376736 60.39517113905667 15.781760570353502 17 8.309238538469154 16.774639403241245 29.829892398587322 45.08622965970228 18 15.392448097171338 22.000115522989073 46.597311615011385 16.010124764828202 19 37.595141433145194 17.413935373139257 27.3647143281513 17.626208865564248 20 36.2510314552596 20.280019473875303 28.031694557216884 15.437254513648217 21 16.009134567778986 38.22795986401294 29.65693798065815 16.105967587549923 22 17.810921873452816 25.425289632636893 19.77081064131762 36.99297785259267 23 12.087046572267882 36.88566524738423 24.319445819718126 26.707842360629762 24 9.893141235105785 19.8376076839291 59.33487639040169 10.934374690563423 25 8.365886061326204 25.11193352477143 51.88488134138694 14.63729907251543 26 7.524672409809552 47.39103706637621 28.46420437667096 16.620086147143283 27 9.486211506089711 55.662070502029906 25.50099844869129 9.350719543189093 28 7.606652473842295 36.24372875202165 45.57266396012807 10.576954814007987 29 7.760091758259893 27.43675116348153 43.396747202693334 21.406409875565238 30 13.157944680991518 47.868848400831766 27.756914876060335 11.21629204211638 31 37.50548734198105 30.372107799452092 23.97898306763046 8.143421790936396 32 40.44703270950919 21.25235171799188 29.099910882265572 9.200704690233357 33 39.44082747466746 27.27274977720566 18.927534079281777 14.358888668845099 34 18.572465920718223 27.118939168894613 22.588292570221473 31.72030234016569 35 19.557711984684953 23.613559098260552 37.19109977885599 19.637629138198502 36 42.38678747070667 25.63500511601809 21.479395649734297 10.498811763540946 37 15.161855959335908 49.311771792586725 25.977407003993797 9.548965244083572 38 15.563999735947453 48.22845496253754 19.721300788856983 16.48624451265802 39 20.126538931247318 42.843350826814536 24.235361586955804 12.79474865498234 40 30.88387464105357 23.324297785259265 22.634543024061788 23.157284549625377 41 12.067448922335544 24.09363963428722 26.036695052315412 37.80221639106182 42 15.090850579265275 19.937411294847674 25.680265372809192 39.29147275307786 43 17.102353368320294 19.266759085057927 28.97238175396904 34.65850579265274 44 10.48424761527544 31.902498597220845 37.28360068653662 20.329653100967093 45 10.464856256395022 58.014613658117966 19.57252368221276 11.94800640327425 46 17.918234478661255 46.852246096973296 21.24389378486319 13.985625639502262 47 17.53383173251477 30.076245172789385 23.920231376043834 28.46969171865201 48 18.15253985543123 27.591964550945637 41.31613691124534 12.939358682377794 49 22.688632537875037 27.60376439911542 39.033443905337165 10.674159157672376 50 17.91732679803281 49.06488266164967 21.518921015282043 11.498869525035483 51 16.46540911641417 43.37541670792488 22.17550417533089 17.983670000330065 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2493.0 1 3675.5 2 4858.0 3 10257.5 4 15657.0 5 12943.0 6 10229.0 7 10965.5 8 11702.0 9 12438.0 10 13174.0 11 13318.5 12 13463.0 13 12775.0 14 12087.0 15 11226.5 16 10366.0 17 9985.0 18 9604.0 19 10549.5 20 11495.0 21 12188.5 22 12882.0 23 12339.0 24 11796.0 25 13819.0 26 23117.0 27 30392.0 28 41280.5 29 52169.0 30 58068.5 31 63968.0 32 76133.5 33 88299.0 34 88045.5 35 87792.0 36 84792.0 37 81792.0 38 115561.0 39 149330.0 40 226252.0 41 303174.0 42 363043.0 43 422912.0 44 397932.5 45 372953.0 46 306349.0 47 239745.0 48 191792.5 49 143840.0 50 122997.0 51 102154.0 52 74994.0 53 47834.0 54 37077.5 55 26321.0 56 20007.5 57 13694.0 58 12189.0 59 10684.0 60 9964.5 61 9245.0 62 7864.0 63 6483.0 64 5705.0 65 4927.0 66 4141.5 67 3356.0 68 2946.5 69 2537.0 70 2096.5 71 1656.0 72 1409.5 73 1163.0 74 1016.0 75 662.0 76 455.0 77 333.0 78 211.0 79 143.0 80 75.0 81 56.5 82 38.0 83 34.5 84 31.0 85 18.5 86 6.0 87 5.0 88 4.0 89 2.5 90 1.0 91 0.5 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2423760.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.417043214823982 #Duplication Level Percentage of deduplicated Percentage of total 1 80.4675302862198 10.796363312403685 2 7.686813637414175 2.0626862151496863 3 2.668554255601654 1.074123233055295 4 1.3956070674822576 0.7489968134129287 5 0.9055507598778262 0.6074906839248744 6 0.636866236710629 0.5126917092005298 7 0.4765005366534252 0.44752598045160774 8 0.37966073034417497 0.40751395407995444 9 0.3236534588753343 0.39082251999218554 >10 2.995553374773709 8.439288040430965 >50 0.4840192431395172 4.680596361678995 >100 1.3947149547216644 50.03290429816665 >500 0.15722913945799907 13.623971289870395 >1k 0.02651314900664298 4.88542862153597 >5k 0.0012331697212392084 1.2895969666462923 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 8529 0.3518912763639965 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 8169 0.3370383206258045 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7553 0.31162326302934285 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 6926 0.2857543651186586 No Hit GAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 3691 0.15228405452685084 No Hit GAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 2845 0.11737960854209988 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2841 0.1172145757005644 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.011634815328250322 0.0 2 0.0 0.0 0.0 0.045260256791101426 0.0 3 0.0 0.0 0.0 0.0645690992507509 0.0 4 0.0 0.0 0.0 0.10359936627388851 0.0 5 0.0 0.0 0.0 0.18479552430933754 0.0 6 0.0 0.0 0.0 0.26322738224906755 0.0 7 0.0 0.0 0.0 0.32391820972373503 0.0 8 0.0 0.0 0.0 0.4581311681024524 0.0 9 0.0 0.0 0.0 0.5105290952899627 0.0 10 0.0 0.0 0.0 0.5956447833118791 0.0 11 0.0 0.0 0.0 0.6914463478232168 0.0 12 0.0 0.0 0.0 0.7782123642604878 0.0 13 0.0 0.0 0.0 0.8122503878271776 0.0 14 0.0 0.0 0.0 0.8247928837838729 0.0 15 0.0 0.0 0.0 0.8451331815031191 0.0 16 0.0 0.0 0.0 0.8946842921741427 0.0 17 0.0 0.0 0.0 0.951084265768888 0.0 18 0.0 0.0 0.0 1.0467207974386903 0.0 19 0.0 0.0 0.0 1.0868650361421923 0.0 20 0.0 0.0 0.0 1.132042776512526 0.0 21 0.0 0.0 0.0 1.1992524012278443 0.0 22 0.0 0.0 0.0 1.260190777964815 0.0 23 0.0 0.0 0.0 1.3406030300029705 0.0 24 0.0 0.0 0.0 1.3961365811796547 0.0 25 0.0 0.0 0.0 1.4439961052249397 0.0 26 0.0 0.0 0.0 1.4975080040928144 0.0 27 0.0 0.0 0.0 1.544253556457735 0.0 28 0.0 0.0 0.0 1.5935158596560715 0.0 29 0.0 0.0 0.0 1.6518962273492426 0.0 30 0.0 0.0 0.0 1.7432831633495065 0.0 31 0.0 0.0 0.0 1.8319883156748193 0.0 32 0.0 0.0 0.0 1.9037776017427468 0.0 33 0.0 0.0 0.0 1.9755256296002905 0.0 34 0.0 0.0 0.0 2.0568455622668913 0.0 35 0.0 0.0 0.0 2.1856949532957057 0.0 36 0.0 0.0 0.0 2.273905007096412 0.0 37 0.0 0.0 0.0 2.3602171832194605 0.0 38 0.0 0.0 0.0 2.4371637455853716 0.0 39 0.0 0.0 0.0 2.51963890814272 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAC 60 0.0 45.000004 6 TCGTTGC 50 2.1827873E-11 45.000004 12 CGTGAAT 30 2.1665019E-6 45.000004 25 GAGTACG 25 3.89209E-5 45.000004 1 TAGCGAA 30 2.1665019E-6 45.000004 1 CCGTGTC 25 3.89209E-5 45.000004 39 CCTGTCG 25 3.89209E-5 45.000004 18 ACGATAT 50 2.1827873E-11 45.000004 25 CTAACGG 25 3.89209E-5 45.000004 2 CCGTACA 25 3.89209E-5 45.000004 33 TACGCAT 25 3.89209E-5 45.000004 23 GTTAACG 100 0.0 45.000004 1 ACGGATC 25 3.89209E-5 45.000004 33 ACCACGG 30 2.1665019E-6 45.000004 2 ATGCGTA 25 3.89209E-5 45.000004 26 TTCGGAC 25 3.89209E-5 45.000004 33 CAGTACG 60 0.0 45.000004 1 AGTAGCG 30 2.1665019E-6 45.000004 1 TATGTCG 25 3.89209E-5 45.000004 1 CCGTTAG 30 2.1665019E-6 45.000004 1 >>END_MODULE