SRR1545086_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545086_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1469286
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8375	0.5700047506067573	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	1473	0.10025277583806012	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCGAG	30	2.1659162E-6	45.000004	1
TCGTTAG	30	2.1659162E-6	45.000004	1
CGTTAGG	130	0.0	45.000004	2
GGTACCG	20	7.0339296E-4	45.0	24
CCGATTA	35	1.2122291E-7	45.0	12
AGCCCGT	25	3.8913386E-5	45.0	16
CGTTGAA	35	1.2122291E-7	45.0	17
CACGACA	20	7.0339296E-4	45.0	17
TCGATTG	80	0.0	45.0	1
CGACAAG	40	6.8175723E-9	45.0	18
CGTTCGA	45	3.8562575E-10	45.0	14
GCGTTAG	95	0.0	45.0	1
TCTAGCG	90	0.0	45.0	1
ACTACCG	20	7.0339296E-4	45.0	28
CCGAATT	25	3.8913386E-5	45.0	29
ACGTACG	25	3.8913386E-5	45.0	1
TAAATCG	20	7.0339296E-4	45.0	34
CCCGGTA	20	7.0339296E-4	45.0	28
CGATCGT	35	1.2122291E-7	45.0	10
TGTCGAT	20	7.0339296E-4	45.0	21