##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545084_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1435900 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.845404276063793 31.0 31.0 33.0 28.0 33.0 2 31.154913991225015 31.0 31.0 33.0 30.0 34.0 3 31.266703809457482 31.0 31.0 34.0 28.0 34.0 4 35.139279894143044 35.0 35.0 37.0 32.0 37.0 5 35.015859043108854 35.0 35.0 37.0 32.0 37.0 6 35.10212340692249 37.0 35.0 37.0 32.0 37.0 7 35.51584441813497 36.0 35.0 37.0 35.0 37.0 8 35.567135594400725 37.0 35.0 37.0 35.0 37.0 9 37.34007451772408 39.0 37.0 39.0 35.0 39.0 10 36.89413399261787 39.0 37.0 39.0 32.0 39.0 11 36.530624695313044 38.0 35.0 39.0 32.0 39.0 12 35.38306079810572 37.0 35.0 39.0 31.0 39.0 13 34.97732432620656 37.0 34.0 39.0 30.0 39.0 14 35.67673793439655 37.0 34.0 40.0 30.0 41.0 15 36.03705271954872 37.0 34.0 40.0 31.0 41.0 16 36.17014416045686 37.0 34.0 40.0 31.0 41.0 17 35.98716066578452 36.0 34.0 40.0 31.0 41.0 18 36.0508113378369 36.0 35.0 40.0 31.0 41.0 19 35.91846159203287 36.0 35.0 40.0 31.0 41.0 20 35.66806532488335 36.0 34.0 40.0 30.0 41.0 21 35.538102235531724 35.0 34.0 40.0 30.0 41.0 22 35.36141862246674 35.0 34.0 40.0 30.0 41.0 23 35.26613343547601 35.0 34.0 40.0 29.0 41.0 24 35.33537850825267 35.0 34.0 40.0 30.0 41.0 25 35.22175987185737 35.0 34.0 40.0 29.0 41.0 26 34.95882930566196 35.0 34.0 39.0 29.0 41.0 27 34.938323699421964 35.0 34.0 39.0 29.0 41.0 28 34.99209763911136 36.0 34.0 39.0 29.0 41.0 29 34.97318128003343 36.0 34.0 39.0 29.0 41.0 30 34.93483808064629 36.0 34.0 39.0 29.0 41.0 31 34.71694198760359 35.0 34.0 40.0 27.0 41.0 32 34.546295703043384 35.0 34.0 40.0 27.0 41.0 33 34.29987394665367 35.0 33.0 40.0 25.0 41.0 34 34.05108155164009 35.0 33.0 40.0 24.0 41.0 35 33.82928059057038 35.0 33.0 40.0 23.0 41.0 36 33.59225712096943 35.0 33.0 40.0 22.0 41.0 37 33.672257817396755 35.0 33.0 40.0 23.0 41.0 38 33.66801100355178 35.0 33.0 40.0 23.0 41.0 39 33.63023191030016 35.0 33.0 40.0 23.0 41.0 40 33.38966641130998 35.0 32.0 39.0 23.0 41.0 41 33.3834535831186 35.0 32.0 39.0 23.0 41.0 42 33.33922069782018 35.0 32.0 39.0 23.0 41.0 43 33.285391043944564 35.0 32.0 39.0 22.0 41.0 44 33.2668869698447 35.0 32.0 39.0 22.0 41.0 45 33.31094087331987 35.0 32.0 39.0 23.0 41.0 46 33.31192422870674 35.0 32.0 39.0 23.0 41.0 47 33.22594191796086 35.0 32.0 39.0 23.0 41.0 48 33.22916498363396 35.0 32.0 39.0 22.0 41.0 49 33.281952085799844 35.0 32.0 39.0 22.0 41.0 50 33.11014903544815 35.0 32.0 39.0 22.0 41.0 51 32.802282192353225 35.0 32.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 4.0 12 7.0 13 5.0 14 17.0 15 51.0 16 162.0 17 439.0 18 1029.0 19 2028.0 20 3690.0 21 5768.0 22 8716.0 23 12531.0 24 17130.0 25 23329.0 26 30167.0 27 34172.0 28 37191.0 29 41152.0 30 48309.0 31 58211.0 32 72735.0 33 94781.0 34 162756.0 35 234151.0 36 89631.0 37 107692.0 38 152311.0 39 197667.0 40 66.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.08280520927641 23.849362768995057 28.095828400306427 14.972003621422106 2 33.33470297374469 26.245142419388536 28.577338254753116 11.842816352113656 3 29.124939062608817 25.068110592659654 33.36966362560067 12.43728671913086 4 27.135037258862038 26.826032453513477 32.595654293474475 13.443275994150012 5 23.1169997910718 32.16561041855282 31.440768855769903 13.276620934605473 6 20.33400654641688 40.82582352531514 30.042621352461868 8.797548575806115 7 83.10376767184344 5.426004596420364 9.5592311442301 1.9109965875060937 8 84.0520231213873 4.76718434431367 9.231840657427398 1.9489518768716483 9 78.59837036005293 7.495438401002856 10.976321470854517 2.9298697680897 10 53.86531095480187 22.54676509506233 15.492652691691621 8.095271258444182 11 51.15453722404067 18.81544675813079 21.242426352810085 8.787589665018455 12 45.60805069990946 22.80980569677554 22.157253290619124 9.42489031269587 13 18.16428720662999 48.08127306915523 22.727975485758062 11.026464238456716 14 11.774357545790098 47.69426840309214 28.875827007451772 11.655547043665994 15 11.607145344383314 24.399958214360332 53.7078487359844 10.285047705271955 16 11.936764398635002 19.43408315342294 51.8215753186155 16.807577129326553 17 12.233442440281356 19.61278640573856 32.01761961139355 36.13615154258653 18 17.206629988160735 23.496900898391253 42.86572881119855 16.43074030224946 19 32.8967894700188 20.428511734800473 28.595166794345012 18.079532000835712 20 31.751236158506863 22.971933978689325 29.944703670172018 15.332126192631797 21 17.508879448429557 35.01420711748729 30.54279545929382 16.93411797478933 22 19.011212479977715 26.17821575318616 24.191447872414514 30.61912389442162 23 15.151264015599972 34.289713768368266 28.07542307960164 22.48359913643011 24 12.660282749495092 22.359356501149104 51.0970123267637 13.883348422592103 25 11.986558952573299 27.19116930148339 45.30858694895188 15.513684796991434 26 11.57768646841702 41.622188174663975 29.80625391740372 16.99387143951529 27 12.603175708614806 45.151821157462216 28.812103906957308 13.432899226965667 28 11.028901734104046 32.97088933769761 42.923392993941086 13.07681593425726 29 11.786196810362839 26.63604707848736 41.25809596768577 20.31966014346403 30 15.34716902291246 41.0766766487917 29.912389442161714 13.663764886134134 31 32.0247231701372 28.62434709938018 26.832857441326 12.518072289156626 32 33.926526916916224 24.401977853610976 29.40232606727488 12.269169162197926 33 32.672400584998954 28.137056898112682 23.49759732571906 15.692945191169303 34 18.70694338045825 26.497666968451846 27.44418134967616 27.35120830141375 35 20.261856675255938 24.367574343617243 35.62197924646563 19.748589734661188 36 33.89038233860296 28.105508740162964 24.533811546765094 13.470297374468974 37 16.300229821018178 42.61940246535274 28.531931192980014 12.54843652064907 38 15.94735009401769 42.87526986558953 23.950205446061705 17.227174594331082 39 20.32383870743088 38.204331777978965 27.159830071732017 14.311999442858136 40 27.08447663486315 25.576432899226965 26.14360331499408 21.195487150915802 41 14.293613761403998 25.276690577338258 28.26457274183439 32.165122919423354 42 16.080576641827427 23.579566822202104 26.596420363535067 33.7434361724354 43 17.389302876244862 23.59857928825127 29.48269378090396 29.5294240545999 44 14.214499616964972 31.017689254126328 35.074865937739396 19.6929451911693 45 13.046730273695939 47.86189846089561 23.700745177240755 15.3906260881677 46 17.2554495438401 42.1115676579149 24.308865519883 16.324117278362003 47 18.050351695800543 29.477052719548713 26.819277108433738 25.653318476217006 48 18.017271397729647 26.8546556166864 39.547391879657354 15.580681105926597 49 19.923532279406643 28.24695313044084 37.2583745386169 14.571140051535622 50 17.567240058499895 42.671773800403926 25.549063305244097 14.211922835852079 51 16.755066508809804 38.45657775611115 25.969635768507555 18.818719966571486 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1603.0 1 2593.0 2 3583.0 3 10953.0 4 18323.0 5 13832.5 6 9342.0 7 9525.0 8 9708.0 9 10171.0 10 10634.0 11 10439.0 12 10244.0 13 9864.0 14 9484.0 15 9107.5 16 8731.0 17 8187.5 18 7644.0 19 7578.0 20 7512.0 21 7948.5 22 8385.0 23 8952.5 24 9520.0 25 11749.0 26 16611.0 27 19244.0 28 25699.0 29 32154.0 30 36198.0 31 40242.0 32 45228.0 33 50214.0 34 53520.0 35 56826.0 36 60831.5 37 64837.0 38 72143.0 39 79449.0 40 113795.0 41 148141.0 42 173881.0 43 199621.0 44 190454.5 45 181288.0 46 155772.0 47 130256.0 48 108733.5 49 87211.0 50 74514.5 51 61818.0 52 50147.5 53 38477.0 54 31419.0 55 24361.0 56 22450.0 57 20539.0 58 19817.0 59 19095.0 60 17211.0 61 15327.0 62 14108.5 63 12890.0 64 10595.5 65 8301.0 66 6860.5 67 5420.0 68 4547.5 69 3675.0 70 3239.5 71 2804.0 72 2432.0 73 2060.0 74 1654.5 75 1009.0 76 769.0 77 611.5 78 454.0 79 337.5 80 221.0 81 187.5 82 154.0 83 104.0 84 54.0 85 42.0 86 30.0 87 24.5 88 19.0 89 11.0 90 3.0 91 1.5 92 0.0 93 1.5 94 3.0 95 2.5 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1435900.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.537618698323293 #Duplication Level Percentage of deduplicated Percentage of total 1 79.54345110328126 16.33633068707914 2 6.604909922539578 2.7129824305177985 3 2.6213997386484067 1.6151192486473591 4 1.545454053329765 1.2695978425225962 5 1.0852057280532603 1.1143770725997089 6 0.8057069032285656 0.9928380696669089 7 0.6470774117309886 0.9302600405300296 8 0.5454261101966423 0.8961402783462642 9 0.4368439560535936 0.8074561140086223 >10 4.062147795275751 17.42859656530887 >50 0.9516346219582108 14.191502812203339 >100 1.1347459373313118 38.334314448157755 >500 0.012593161272122911 1.584095509052808 >1k 0.0030632013905163838 1.0963965254387649 >5k 3.40355710057376E-4 0.6899923559200541 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9871 0.6874434152796155 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3733 0.25997632147085453 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2402 0.16728184413956404 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1848 0.12869977017898182 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1717 0.11957657218469252 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03029458875966293 0.0 2 0.0 0.0 0.0 0.10404624277456648 0.0 3 0.0 0.0 0.0 0.14659795250365623 0.0 4 0.0 0.0 0.0 0.21415140330106552 0.0 5 0.0 0.0 0.0 0.38442788495020547 0.0 6 0.0 0.0 0.0 0.5678668430949231 0.0 7 0.0 0.0 0.0 0.7005362490424124 0.0 8 0.0 0.0 0.0 0.9926178703252315 0.0 9 0.0 0.0 0.0 1.1117069433804583 0.0 10 0.0 0.0 0.0 1.299254822759245 0.0 11 0.0 0.0 0.0 1.4582491816978898 0.0 12 0.0 0.0 0.0 1.5983703600529284 0.0 13 0.0 0.0 0.0 1.6575666829166376 0.0 14 0.0 0.0 0.0 1.6804791420015321 0.0 15 0.0 0.0 0.0 1.7198272860227035 0.0 16 0.0 0.0 0.0 1.801657497040184 0.0 17 0.0 0.0 0.0 1.8947698307681593 0.0 18 0.0 0.0 0.0 2.0275785221812104 0.0 19 0.0 0.0 0.0 2.0854516331220836 0.0 20 0.0 0.0 0.0 2.153422940316178 0.0 21 0.0 0.0 0.0 2.2492513406226062 0.0 22 0.0 0.0 0.0 2.3554565081133783 0.0 23 6.964273278083432E-5 0.0 0.0 2.4764955776864683 0.0 24 6.964273278083432E-5 0.0 0.0 2.567518629431019 0.0 25 6.964273278083432E-5 0.0 0.0 2.6431506372310047 0.0 26 6.964273278083432E-5 0.0 0.0 2.7248415627829234 0.0 27 6.964273278083432E-5 0.0 0.0 2.8022842816352114 0.0 28 6.964273278083432E-5 0.0 0.0 2.8862037746361167 0.0 29 6.964273278083432E-5 0.0 0.0 2.9747196880005573 0.0 30 6.964273278083432E-5 0.0 0.0 3.102444459920607 0.0 31 6.964273278083432E-5 0.0 0.0 3.223274601295355 0.0 32 6.964273278083432E-5 0.0 0.0 3.336235113865868 0.0 33 6.964273278083432E-5 0.0 0.0 3.4429277804861065 0.0 34 6.964273278083432E-5 0.0 0.0 3.5574900759105788 0.0 35 6.964273278083432E-5 0.0 0.0 3.715509436590292 0.0 36 6.964273278083432E-5 0.0 0.0 3.843652064907027 0.0 37 6.964273278083432E-5 0.0 0.0 3.9719339786893237 0.0 38 6.964273278083432E-5 0.0 0.0 4.090326624416742 0.0 39 6.964273278083432E-5 0.0 0.0 4.215892471620586 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 25 3.891292E-5 45.000004 1 GTTAGCG 100 0.0 45.000004 1 CGAATTA 25 3.891292E-5 45.000004 41 GTATCGT 25 3.891292E-5 45.000004 16 TCGAGAG 50 2.1827873E-11 45.000004 1 ATACGTT 25 3.891292E-5 45.000004 36 TCGACCA 25 3.891292E-5 45.000004 37 CGTTTAC 25 3.891292E-5 45.000004 33 TCGGTAT 25 3.891292E-5 45.000004 35 GCGTAAG 100 0.0 45.000004 1 TGCGTGA 25 3.891292E-5 45.000004 40 TAATCCG 25 3.891292E-5 45.000004 1 CTATGCG 70 0.0 45.0 1 TAGCGAT 20 7.0338754E-4 45.0 37 CCTACGC 20 7.0338754E-4 45.0 13 CTAAGCG 35 1.2122109E-7 45.0 1 AAACGCC 35 1.2122109E-7 45.0 11 AATGCGT 20 7.0338754E-4 45.0 38 ACGGCAC 20 7.0338754E-4 45.0 35 GTTCGAA 40 6.8175723E-9 45.0 15 >>END_MODULE