##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545082_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1043987 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.953713983028525 31.0 31.0 33.0 30.0 33.0 2 31.272485193781147 31.0 31.0 33.0 30.0 34.0 3 31.478377604318826 31.0 31.0 34.0 30.0 34.0 4 35.32723491767618 37.0 35.0 37.0 33.0 37.0 5 35.216292923187744 37.0 35.0 37.0 33.0 37.0 6 35.29816654805089 37.0 35.0 37.0 32.0 37.0 7 35.567081774006766 36.0 35.0 37.0 35.0 37.0 8 35.61775194518706 37.0 35.0 37.0 35.0 37.0 9 37.53269437263108 39.0 37.0 39.0 35.0 39.0 10 37.0885518689409 39.0 37.0 39.0 33.0 39.0 11 36.61239555664965 39.0 35.0 39.0 32.0 39.0 12 34.89253027097081 35.0 34.0 39.0 31.0 39.0 13 34.39091674513188 35.0 33.0 39.0 27.0 39.0 14 34.91576140315924 35.0 33.0 40.0 27.0 41.0 15 35.436905823539945 35.0 33.0 40.0 30.0 41.0 16 35.72119959348153 35.0 34.0 40.0 32.0 41.0 17 35.63167549021204 35.0 34.0 40.0 31.0 41.0 18 35.78025013721435 36.0 35.0 39.0 31.0 41.0 19 35.61975005435892 36.0 35.0 39.0 31.0 41.0 20 35.30051810989983 35.0 34.0 39.0 31.0 41.0 21 35.18277047511128 35.0 34.0 39.0 30.0 41.0 22 35.00396748235371 35.0 34.0 39.0 30.0 41.0 23 35.00683437629013 35.0 34.0 39.0 30.0 41.0 24 35.104606666558105 35.0 34.0 39.0 31.0 41.0 25 35.0498291645394 35.0 34.0 39.0 30.0 41.0 26 34.852320000153256 35.0 34.0 38.0 30.0 41.0 27 34.83892807094341 35.0 34.0 39.0 30.0 41.0 28 34.97558877648859 35.0 34.0 39.0 30.0 41.0 29 34.99613979867566 35.0 34.0 38.0 30.0 41.0 30 34.9642888273513 36.0 34.0 38.0 30.0 41.0 31 34.647600018007886 35.0 34.0 38.0 29.0 41.0 32 34.49699565224471 35.0 34.0 39.0 29.0 41.0 33 34.272242853598755 35.0 33.0 39.0 27.0 41.0 34 34.120615486591305 35.0 34.0 38.0 27.0 41.0 35 33.925090063382015 35.0 33.0 38.0 27.0 41.0 36 33.61215417433359 35.0 33.0 38.0 23.0 41.0 37 33.62030849043139 35.0 33.0 38.0 24.0 41.0 38 33.75007734770644 35.0 33.0 38.0 26.0 41.0 39 33.78246280844493 35.0 33.0 38.0 25.0 41.0 40 33.40794281921135 35.0 33.0 38.0 23.0 41.0 41 33.56776760630161 35.0 33.0 38.0 23.0 41.0 42 33.56132787094092 35.0 33.0 38.0 23.0 41.0 43 33.52915218292948 35.0 33.0 38.0 24.0 41.0 44 33.52745101232104 35.0 33.0 38.0 23.0 41.0 45 33.609571766698245 35.0 33.0 38.0 24.0 41.0 46 33.64316892834872 35.0 33.0 38.0 25.0 41.0 47 33.593793792451436 35.0 33.0 38.0 24.0 41.0 48 33.66030707278922 35.0 33.0 38.0 24.0 41.0 49 33.7276843485599 35.0 33.0 38.0 24.0 40.0 50 33.519066808303165 35.0 33.0 38.0 24.0 40.0 51 33.21189823244926 35.0 33.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 4.0 14 8.0 15 17.0 16 63.0 17 181.0 18 443.0 19 871.0 20 1715.0 21 2929.0 22 4649.0 23 6939.0 24 10223.0 25 14013.0 26 18127.0 27 21266.0 28 23795.0 29 27522.0 30 33796.0 31 42489.0 32 55947.0 33 76876.0 34 152444.0 35 227165.0 36 50501.0 37 59503.0 38 86561.0 39 125893.0 40 45.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.142233571873977 25.377519068724038 31.853749136722964 12.626498222679016 2 28.734936354571467 27.163077701159118 32.53584575286857 11.56614019140085 3 28.05427653792624 26.145632081625536 33.76612927172465 12.033962108723575 4 25.293226831368585 28.394414872982132 33.80271976566758 12.509638529981695 5 22.30746168295199 32.93115718873894 32.633356545627485 12.128024582681585 6 19.257327916918506 41.98404769408049 29.39624727127828 9.36237711772273 7 88.01852896635685 4.8950801111508095 6.212625252996445 0.8737656694958845 8 90.88580604930905 3.0203441230590036 5.372384905176022 0.721464922455931 9 87.89755044842512 4.685977890529288 6.081397565295353 1.3350740957502345 10 68.41608180944782 16.541681074572768 10.193996668540892 4.8482404474385214 11 66.00264179534803 13.049300422323268 15.238791287630976 5.709266494697731 12 58.87372160764453 20.478607492238886 14.899993965442098 5.747676934674474 13 17.25366312032621 59.85495987976862 15.18994010461816 7.70143689528701 14 8.316099721548257 58.66643933305683 24.032674736371238 8.984786209023675 15 7.033037767711667 22.553154397516444 62.05642407424613 8.357383760525753 16 7.01349729450654 15.092812458392682 60.573072270057004 17.320617977043774 17 7.7122607848565154 15.801250398711861 30.43486173678408 46.051627079647545 18 14.83581692109193 21.61952208217152 47.249822076328535 16.294838920408015 19 37.613590973833965 17.155769181033865 26.137586004423426 19.093053840708745 20 36.50380703974283 19.919692486592268 28.48569953457275 15.090800939092153 21 15.34875434272649 37.67518177908345 29.854682098531875 17.121381779658176 22 18.892093483922693 24.854907197120273 18.100800105748444 38.15219921320859 23 11.658861652491842 37.576234186824166 23.855373678024726 26.909530482659267 24 8.697809455481725 19.207039934405312 60.68753729692037 11.407613313192597 25 7.614941565364319 24.97674779475223 52.3209580195922 15.08735262029125 26 7.135242105505145 47.905290008400485 27.4986182778138 17.46084960828056 27 7.589941254057761 57.33778294174161 24.271853959867315 10.80042184433331 28 6.746348374069792 35.38865905418363 46.56810860671637 11.296883965030217 29 7.139265144106201 25.74802176655456 44.52929011568152 22.58342297365772 30 12.663950796322176 48.91698842993256 26.998133118515845 11.420927655229423 31 36.805151788288555 30.72442472942671 23.42251388187784 9.047909600406902 32 41.087772165745356 20.727078019170737 27.811265849095822 10.373883965988082 33 40.28680433760191 27.37189256188056 17.316211791909286 15.025091308608248 34 18.147735556094087 25.44418656554153 23.287550515475765 33.120527362888616 35 19.510587775518278 22.46436018839315 37.37833900230558 20.646713033782987 36 42.46872805887429 25.899173073994213 20.473722373937605 11.158376493193881 37 14.832081242390949 49.02379052612724 26.030209188428593 10.113919043053219 38 14.450658868357555 47.67262427597279 21.504865482041442 16.371851373628214 39 19.36978142448134 43.32113330913124 24.783641941901575 12.525443324485842 40 31.24157676292904 23.506806119233286 21.97623150479843 23.275385613039244 41 11.673421220762327 22.06358891442135 27.566531000864952 38.69645886395137 42 14.1828394414873 18.791134372362876 24.908164565267576 42.11786162088225 43 15.693777796083669 19.199472790369995 29.020763668513112 36.08598574503322 44 10.016599823561021 31.37050557142953 36.30696550819119 22.305929096818254 45 9.888820454660834 58.872763741310955 18.401857494394086 12.836558309634125 46 17.204428790779964 48.15031221653143 20.124101162179223 14.521157830509384 47 16.366391535526784 29.757267092406327 24.406913112902746 29.46942825916415 48 16.982491161288408 25.935284634770355 43.862232000973194 13.219992202968045 49 22.094719570262846 26.98529770964581 40.142932814297495 10.777049905793847 50 17.671101268502383 48.88126001568985 22.21972112679564 11.227917589012124 51 15.016757871506062 43.46040707403445 22.394435946041476 19.12839910841802 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 836.0 1 1246.5 2 1657.0 3 3746.5 4 5836.0 5 4831.5 6 3827.0 7 4223.5 8 4620.0 9 5017.0 10 5414.0 11 5501.5 12 5589.0 13 5313.5 14 5038.0 15 4631.5 16 4225.0 17 4070.5 18 3916.0 19 3916.0 20 3916.0 21 3740.0 22 3564.0 23 4096.0 24 4628.0 25 5092.5 26 7767.5 27 9978.0 28 14130.0 29 18282.0 30 22446.0 31 26610.0 32 30049.5 33 33489.0 34 36839.5 35 40190.0 36 39066.5 37 37943.0 38 49546.0 39 61149.0 40 97206.0 41 133263.0 42 161417.5 43 189572.0 44 176877.5 45 164183.0 46 134683.0 47 105183.0 48 85970.5 49 66758.0 50 55703.5 51 44649.0 52 34522.5 53 24396.0 54 17082.5 55 9769.0 56 7692.5 57 5616.0 58 4779.5 59 3943.0 60 3612.5 61 3282.0 62 2797.0 63 2312.0 64 1976.5 65 1641.0 66 1353.5 67 1066.0 68 903.0 69 740.0 70 619.5 71 499.0 72 447.5 73 396.0 74 313.0 75 162.0 76 94.0 77 82.0 78 70.0 79 48.5 80 27.0 81 25.0 82 23.0 83 14.0 84 5.0 85 3.5 86 2.0 87 2.0 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1043987.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.607332550002548 #Duplication Level Percentage of deduplicated Percentage of total 1 78.96316905606598 12.324044386600924 2 6.912026964960852 2.1575660687345763 3 2.73253825837973 1.279428999124117 4 1.5834767325061279 0.9885539179765828 5 1.0919823373196524 0.8521465738638436 6 0.7940990588839627 0.7436260853787637 7 0.6291580919237036 0.6873635697024821 8 0.49135270091550637 0.6134964002024199 9 0.42982530474853736 0.603758382265495 >10 3.4342457142468246 11.165169623561408 >50 1.0064434204690922 11.601952694041657 >100 1.8941560462251439 52.75481897603772 >500 0.035680756960395694 3.5223711189845095 >1k 0.0018455563945032256 0.7057032035254905 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3029 0.29013771244277947 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2895 0.27730230357274566 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1426 0.1365917391691659 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.019253113305050733 0.0 2 0.0 0.0 0.0 0.05881299288209527 0.0 3 0.0 0.0 0.0 0.08036498538774908 0.0 4 0.0 0.0 0.0 0.1137945204298521 0.0 5 0.0 0.0 0.0 0.1876460147492258 0.0 6 0.0 0.0 0.0 0.25986913630150565 0.0 7 0.0 0.0 0.0 0.30632565348035945 0.0 8 0.0 0.0 0.0 0.4122656699748177 0.0 9 0.0 0.0 0.0 0.4534539223189561 0.0 10 0.0 0.0 0.0 0.5219413651702559 0.0 11 0.0 0.0 0.0 0.6109271475602666 0.0 12 0.0 0.0 0.0 0.6817134696121695 0.0 13 0.0 0.0 0.0 0.7147598581208386 0.0 14 0.0 0.0 0.0 0.7259668942237787 0.0 15 0.0 0.0 0.0 0.7445495010953201 0.0 16 0.0 0.0 0.0 0.7893776455070801 0.0 17 0.0 0.0 0.0 0.84292237355446 0.0 18 0.0 0.0 0.0 0.9283640505102075 0.0 19 0.0 0.0 0.0 0.9692649429542705 0.0 20 0.0 0.0 0.0 1.007579596297655 0.0 21 0.0 0.0 0.0 1.0683083218469196 0.0 22 0.0 0.0 0.0 1.1307612067966364 0.0 23 0.0 0.0 0.0 1.2140955778184976 0.0 24 0.0 0.0 0.0 1.2735790771341022 0.0 25 0.0 0.0 0.0 1.321280820546616 0.0 26 0.0 0.0 0.0 1.373580322360336 0.0 27 0.0 0.0 0.0 1.4204199860726234 0.0 28 0.0 0.0 0.0 1.473294207686494 0.0 29 0.0 0.0 0.0 1.538045971836814 0.0 30 0.0 0.0 0.0 1.627510687393617 0.0 31 0.0 0.0 0.0 1.71323972424944 0.0 32 0.0 0.0 0.0 1.7839302596679845 0.0 33 0.0 0.0 0.0 1.8498314634186057 0.0 34 0.0 0.0 0.0 1.930004875539638 0.0 35 0.0 0.0 0.0 2.068224987475898 0.0 36 0.0 0.0 0.0 2.1578812762994177 0.0 37 0.0 0.0 0.0 2.2445681794888253 0.0 38 0.0 0.0 0.0 2.32704047081046 0.0 39 0.0 0.0 0.0 2.409608548765454 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTTGCG 75 0.0 45.000004 1 AGTCAAG 55 1.8189894E-12 45.000004 1 CGCTAGG 55 1.8189894E-12 45.000004 2 GCTACTG 55 1.8189894E-12 45.000004 1 GATTACG 55 1.8189894E-12 45.000004 1 CGGGTTG 45 3.8562575E-10 45.0 6 CGGGTCA 25 3.8905586E-5 45.0 6 AAGTACG 40 6.8139343E-9 45.0 1 TCGTTTG 50 2.1827873E-11 45.0 1 AATCCGG 70 0.0 45.0 2 ACAGTAC 35 1.2117926E-7 45.0 16 TCGCAAG 25 3.8905586E-5 45.0 1 GTCGATG 45 3.8562575E-10 45.0 1 TGCCATT 20 7.03299E-4 45.0 37 CACGGGC 35 1.2117926E-7 45.0 4 CAACGGT 25 3.8905586E-5 45.0 41 CAACGCG 45 3.8562575E-10 45.0 1 AGATAAC 20 7.03299E-4 45.0 45 CTATACG 40 6.8139343E-9 45.0 1 CGTGAAT 45 3.8562575E-10 45.0 9 >>END_MODULE