##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545081_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3113929 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.90878147831887 31.0 31.0 33.0 30.0 33.0 2 31.24172741253895 31.0 31.0 33.0 30.0 34.0 3 31.399471535799307 31.0 31.0 34.0 30.0 34.0 4 35.205236214441626 37.0 35.0 37.0 33.0 37.0 5 35.06127403675549 37.0 35.0 37.0 32.0 37.0 6 35.15420839717283 37.0 35.0 37.0 32.0 37.0 7 35.569850179628375 36.0 35.0 37.0 35.0 37.0 8 35.64577837195389 37.0 35.0 37.0 35.0 37.0 9 37.51328177360499 39.0 37.0 39.0 35.0 39.0 10 37.09185598001753 39.0 37.0 39.0 33.0 39.0 11 36.60476876640411 39.0 35.0 39.0 32.0 39.0 12 34.61776842053881 35.0 33.0 39.0 30.0 39.0 13 33.921094861186624 35.0 33.0 38.0 25.0 39.0 14 34.41311635557523 35.0 33.0 39.0 25.0 41.0 15 35.04997512788506 35.0 33.0 39.0 30.0 41.0 16 35.38216285599319 35.0 34.0 39.0 31.0 41.0 17 35.28831550109203 35.0 34.0 39.0 31.0 41.0 18 35.43332169744397 36.0 34.0 39.0 31.0 41.0 19 35.26275615147295 36.0 34.0 38.0 30.0 41.0 20 34.9190694457067 35.0 34.0 38.0 30.0 41.0 21 34.724378751089056 35.0 34.0 38.0 29.0 41.0 22 34.532934116352685 35.0 33.0 38.0 29.0 41.0 23 34.57314730040409 35.0 34.0 38.0 29.0 41.0 24 34.699522371897366 35.0 34.0 38.0 30.0 41.0 25 34.651166741438225 35.0 34.0 38.0 30.0 41.0 26 34.42014895008846 35.0 34.0 38.0 29.0 40.0 27 34.37221786366998 35.0 34.0 38.0 29.0 40.0 28 34.532100121743305 35.0 34.0 38.0 29.0 40.0 29 34.58653810025855 35.0 34.0 38.0 29.0 40.0 30 34.569276306556766 35.0 34.0 38.0 29.0 40.0 31 34.20207525605112 35.0 34.0 38.0 29.0 40.0 32 34.02142373830617 35.0 34.0 38.0 28.0 41.0 33 33.7877873901428 35.0 33.0 38.0 27.0 41.0 34 33.631388191574054 35.0 33.0 38.0 25.0 41.0 35 33.39427199528313 35.0 33.0 38.0 24.0 41.0 36 33.06281003837917 35.0 33.0 38.0 23.0 40.0 37 33.111095339681796 35.0 32.0 38.0 23.0 40.0 38 33.236240774918116 35.0 32.0 38.0 23.0 40.0 39 33.276689674042025 35.0 33.0 37.0 23.0 40.0 40 32.874123976494005 35.0 32.0 37.0 23.0 40.0 41 33.03247312318296 35.0 32.0 37.0 23.0 40.0 42 33.01912246554112 35.0 32.0 37.0 23.0 40.0 43 33.00066571845408 35.0 32.0 37.0 23.0 40.0 44 33.00813152772591 35.0 33.0 37.0 23.0 40.0 45 33.11386322552634 35.0 33.0 37.0 23.0 40.0 46 33.16002998141576 35.0 33.0 37.0 23.0 40.0 47 33.10405278989983 35.0 33.0 37.0 23.0 40.0 48 33.1837948135619 35.0 33.0 37.0 23.0 40.0 49 33.29177094275431 35.0 33.0 37.0 24.0 40.0 50 33.01511177679388 35.0 32.0 37.0 24.0 40.0 51 32.69201706268833 35.0 32.0 36.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 6.0 11 9.0 12 1.0 13 6.0 14 21.0 15 74.0 16 284.0 17 821.0 18 2084.0 19 4189.0 20 7356.0 21 11863.0 22 17739.0 23 25868.0 24 35831.0 25 49151.0 26 62330.0 27 72427.0 28 80400.0 29 91594.0 30 109756.0 31 134989.0 32 174056.0 33 237138.0 34 464576.0 35 704511.0 36 130694.0 37 151522.0 38 216326.0 39 328115.0 40 190.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.46439337569996 25.712692871288972 31.879146891274658 13.943766861736412 2 29.18637515498908 26.842069938010788 32.0836152654733 11.887939641526831 3 27.56064765766978 25.31631260699907 34.638972179519826 12.484067555811324 4 25.751454191794355 27.7397461534929 33.02731051350239 13.481489141210348 5 22.517436974317654 33.01584589757827 32.133905429443 12.33281169866108 6 19.117263110366356 41.01843683654958 29.87023788917474 9.994062163909325 7 86.79228074885458 5.336634200715559 6.6827471018125335 1.1883379486173256 8 90.17826032642363 3.0315720107940805 5.873094730162441 0.917072932619851 9 87.49977921783059 4.395122689052962 6.852468376767742 1.2526297163487028 10 72.79298917862289 13.31526826719556 9.354709115076162 4.537033439105388 11 71.01366151893636 11.799883683924714 12.77383010338386 4.41262469375506 12 61.568905392512164 19.838923751954525 13.408237631622303 5.183933223911015 13 16.395524753454556 63.67229310623331 13.648673428328006 6.283508711984121 14 7.013358364946663 63.19077923741999 23.604295409432908 6.191566988200437 15 6.6184553340811565 20.35984121667514 66.77284549519274 6.248857954050976 16 6.485022619333967 12.50747849421101 65.24660645762957 15.760892428825448 17 7.032080692912395 13.695174167426424 29.743966545158866 49.52877859450231 18 14.61215075873599 19.80456201795224 49.386386137898455 16.196901085413316 19 38.96238481994933 15.423537273971244 26.976755089791705 18.637322816287718 20 38.28613304927633 18.580160305517563 27.20890553381275 15.924801111393355 21 14.78142244090986 37.285018380316316 31.23651823789174 16.697040940882083 22 18.44470442325435 24.15356933314793 17.949156836909257 39.45256940668847 23 10.602457538370336 36.981864390613914 23.395138424800308 29.020539646215443 24 8.27324579333697 18.21502673953067 62.2215535421649 11.29017392496746 25 6.884100440311903 22.371319320382707 55.96537364853212 14.779206590773263 26 6.57776718737004 47.28845776509355 28.686395868370795 17.447379179165615 27 7.465070655111276 58.140953117428175 24.883483213650663 9.510493013809885 28 6.2111563879587495 37.11455848864891 46.90456975737084 9.769715366021511 29 6.195227957991335 25.894810061501083 45.65720669931781 22.252755281189778 30 12.346781188652663 48.318860192380754 28.027485533549417 11.30687308541717 31 38.76337578666694 29.84056476560641 22.978847623051134 8.417211824675515 32 42.40170536964716 19.860311522838188 29.783338027296065 7.954645080218592 33 41.94331341530266 26.552146821587776 17.7207315902193 13.78380817289026 34 18.969282857765865 26.707802265241114 22.03046376458808 32.29245111240494 35 18.16955364107531 22.394794486322585 38.152186514207614 21.28346535839449 36 45.63389210222841 23.447708666446797 20.7587263550325 10.159672876292298 37 14.83476341303864 49.15882796300109 26.831857759120393 9.174550864839885 38 14.758814346762565 49.17616939885271 18.273441687334554 17.79157456705018 39 20.41237934455153 42.71407601136699 24.87070193315262 12.002842710928862 40 31.72763412396365 21.18728461695819 22.092250658252002 24.992830600826156 41 11.6695338911067 21.48809430144361 25.667958389545813 41.17441341790388 42 14.810806540547327 17.934930436756908 25.14244865570153 42.11181436699424 43 16.55278588561268 17.4591328190206 29.20169342332468 36.78638787204204 44 9.776202347580822 30.770997026586027 37.679728728561244 21.773071897271905 45 8.684109367939987 60.3137386883259 19.224555216255734 11.777596727478372 46 18.6418187441011 47.17782582711423 20.27801533047157 13.902340098313095 47 17.363851263146977 29.46078732045593 23.03514306202871 30.140218354368386 48 18.147684163640214 25.837262185489777 42.93713825845098 13.077915392419031 49 23.254255315390942 24.88936003357816 40.77822583623455 11.078158814796355 50 18.86751432033293 50.12615894582054 20.398409854559947 10.607916879286586 51 15.235960742842886 44.32875637177341 21.790573901974 18.644708983409704 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6421.0 1 6431.0 2 6441.0 3 12549.5 4 18658.0 5 15142.5 6 11627.0 7 12823.0 8 14019.0 9 15179.0 10 16339.0 11 16704.5 12 17070.0 13 16772.0 14 16474.0 15 15492.5 16 14511.0 17 12930.0 18 11349.0 19 10882.5 20 10416.0 21 11203.5 22 11991.0 23 12931.0 24 13871.0 25 14779.0 26 24729.5 27 33772.0 28 37936.5 29 42101.0 30 53018.5 31 63936.0 32 70688.0 33 77440.0 34 79294.0 35 81148.0 36 85414.0 37 89680.0 38 140745.0 39 191810.0 40 294116.5 41 396423.0 42 489245.5 43 582068.0 44 555750.5 45 529433.0 46 436872.0 47 344311.0 48 273301.0 49 202291.0 50 172025.0 51 141759.0 52 104025.0 53 66291.0 54 47573.0 55 28855.0 56 22251.5 57 15648.0 58 13490.5 59 11333.0 60 10380.5 61 9428.0 62 8371.0 63 7314.0 64 6029.0 65 4744.0 66 3921.5 67 3099.0 68 2518.5 69 1938.0 70 1796.5 71 1655.0 72 1371.0 73 1087.0 74 891.5 75 510.0 76 324.0 77 276.5 78 229.0 79 190.0 80 151.0 81 100.0 82 49.0 83 33.0 84 17.0 85 15.0 86 13.0 87 7.0 88 1.0 89 5.0 90 9.0 91 5.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3113929.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.414823944675305 #Duplication Level Percentage of deduplicated Percentage of total 1 80.59810844719493 10.006113266457724 2 8.422985461325982 2.0913976318184355 3 2.7649682151704496 1.0297978081189272 4 1.3267272482295642 0.6588434083749428 5 0.7955328022691244 0.4938199841192685 6 0.5791823600512529 0.43142682191387083 7 0.38767699876924067 0.33690591809841597 8 0.33595343150106255 0.3336642164556181 9 0.2809959912785799 0.3139664184794778 >10 2.6736900768599083 7.169057250420302 >50 0.47770395554806444 4.1388457380411 >100 0.8953981933594898 30.104002057819834 >500 0.39951332212075674 31.62808714187948 >1k 0.06130373473374421 10.955385447871729 >5k 2.597615878548483E-4 0.30868689013086986 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9572 0.30739300735501673 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4692 0.15067780928852262 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3995 0.12829451153189428 No Hit GAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 3915 0.12572540992424683 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3622 0.11631607528623807 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3530 0.1133616084374435 No Hit TTTGTAGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 3203 0.10286040561618456 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01448331031311247 0.0 2 0.0 0.0 0.0 0.06981533618781931 0.0 3 0.0 0.0 0.0 0.09871772927385307 0.0 4 0.0 0.0 0.0 0.14720952211819857 0.0 5 0.0 0.0 0.0 0.25652479552359736 0.0 6 0.0 0.0 0.0 0.35280187827018533 0.0 7 0.0 0.0 0.0 0.42537899868622564 0.0 8 0.0 0.0 0.0 0.5822547656031978 0.0 9 0.0 0.0 0.0 0.6318063128606979 0.0 10 0.0 0.0 0.0 0.7082049719181137 0.0 11 0.0 0.0 0.0 0.804385713354415 0.0 12 0.0 0.0 0.0 0.8839636356512945 0.0 13 0.0 0.0 0.0 0.9188391899751086 0.0 14 0.0 0.0 0.0 0.9312672190021032 0.0 15 0.0 0.0 0.0 0.953457834138158 0.0 16 0.0 0.0 0.0 1.0082439259212397 0.0 17 0.0 0.0 0.0 1.0712190290786976 0.0 18 0.0 0.0 0.0 1.1811123503458172 0.0 19 0.0 0.0 0.0 1.2213509042755952 0.0 20 0.0 0.0 0.0 1.2647366076747415 0.0 21 0.0 0.0 0.0 1.334295033701796 0.0 22 0.0 0.0 0.0 1.3992290768350852 0.0 23 0.0 0.0 0.0 1.4946069740189967 0.0 24 0.0 0.0 0.0 1.5569398017745426 0.0 25 0.0 0.0 0.0 1.6021881038392334 0.0 26 0.0 0.0 0.0 1.6628510155498086 0.0 27 0.0 0.0 0.0 1.7155175985065811 0.0 28 0.0 0.0 0.0 1.7686016604745967 0.0 29 0.0 0.0 0.0 1.8271771771289582 0.0 30 0.0 0.0 0.0 1.9312257922386797 0.0 31 0.0 0.0 0.0 2.0325126231201804 0.0 32 0.0 0.0 0.0 2.1078836415345372 0.0 33 0.0 0.0 0.0 2.1787266183654155 0.0 34 0.0 0.0 0.0 2.2599102291670747 0.0 35 0.0 0.0 0.0 2.4041973982065743 0.0 36 0.0 0.0 0.0 2.5032362651813833 0.0 37 0.0 0.0 0.0 2.597425952871758 0.0 38 0.0 0.0 0.0 2.683490856727947 0.0 39 0.0 0.0 0.0 2.772060634651593 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAG 75 0.0 45.0 1 TCGCCCG 40 6.8212103E-9 45.0 1 CTAGACC 20 7.0351467E-4 45.0 9 AACGTAC 20 7.0351467E-4 45.0 21 CTATGCG 135 0.0 45.0 1 AATCCCG 75 0.0 45.0 1 CTCACGA 50 2.1827873E-11 45.0 24 CGAACTA 45 3.8562575E-10 45.0 14 ATCTAGT 50 2.1827873E-11 45.0 19 CGCGGGT 20 7.0351467E-4 45.0 4 CCCTATG 50 2.1827873E-11 45.0 37 ACGTTAC 25 3.8923477E-5 45.0 25 GCGAAGT 95 0.0 45.0 2 GGCCGTA 45 3.8562575E-10 45.0 16 GGCAACG 150 0.0 45.0 1 CGACCTT 20 7.0351467E-4 45.0 44 CCTACCG 20 7.0351467E-4 45.0 41 GTTAGCG 75 0.0 45.0 1 TCGATTG 175 0.0 45.0 1 ATCGTTC 25 3.8923477E-5 45.0 22 >>END_MODULE