##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545079_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3318267 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.063855621021453 31.0 31.0 33.0 30.0 33.0 2 31.39438056069629 31.0 31.0 33.0 30.0 34.0 3 31.51865717858147 31.0 31.0 34.0 30.0 34.0 4 35.384019128056906 37.0 35.0 37.0 33.0 37.0 5 35.292537942245154 37.0 35.0 37.0 33.0 37.0 6 35.35313614003936 37.0 35.0 37.0 33.0 37.0 7 35.69772263654492 37.0 35.0 37.0 35.0 37.0 8 35.76458374205572 37.0 35.0 37.0 35.0 37.0 9 37.62362462092411 39.0 37.0 39.0 35.0 39.0 10 37.18973217043716 39.0 37.0 39.0 34.0 39.0 11 36.77229318798035 39.0 35.0 39.0 33.0 39.0 12 35.25028878025789 35.0 35.0 39.0 31.0 39.0 13 34.7294533562248 35.0 34.0 39.0 30.0 39.0 14 35.312715944798896 35.0 33.0 40.0 29.0 41.0 15 35.78424581264859 35.0 34.0 40.0 31.0 41.0 16 36.00745419220334 35.0 35.0 40.0 32.0 41.0 17 35.885624032062516 35.0 34.0 40.0 32.0 41.0 18 35.98891921596424 36.0 35.0 39.0 31.0 41.0 19 35.87959257045922 36.0 35.0 40.0 31.0 41.0 20 35.594271949785835 35.0 34.0 40.0 31.0 41.0 21 35.42092483817607 35.0 34.0 40.0 31.0 41.0 22 35.25950805043717 35.0 34.0 39.0 30.0 41.0 23 35.22913677531073 35.0 34.0 39.0 30.0 41.0 24 35.31289917297192 35.0 34.0 39.0 31.0 41.0 25 35.19202402941053 35.0 34.0 39.0 31.0 41.0 26 34.96820870653266 35.0 34.0 39.0 30.0 41.0 27 34.948802191023205 35.0 34.0 39.0 30.0 41.0 28 35.07275484462221 35.0 34.0 39.0 30.0 41.0 29 35.09446798584924 36.0 34.0 39.0 30.0 41.0 30 35.04646732767436 36.0 34.0 39.0 30.0 41.0 31 34.7694694248534 35.0 34.0 39.0 29.0 41.0 32 34.60965256864502 35.0 34.0 39.0 29.0 41.0 33 34.340922234407294 35.0 33.0 39.0 27.0 41.0 34 34.16072968209008 35.0 34.0 39.0 27.0 41.0 35 33.93082654289121 35.0 33.0 39.0 25.0 41.0 36 33.67283283714059 35.0 33.0 39.0 23.0 41.0 37 33.68690042121384 35.0 33.0 39.0 23.0 41.0 38 33.7289901626361 35.0 33.0 39.0 24.0 41.0 39 33.71633626829909 35.0 33.0 39.0 24.0 41.0 40 33.39568365053204 35.0 33.0 39.0 23.0 41.0 41 33.47912509752832 35.0 33.0 39.0 23.0 41.0 42 33.47000497548871 35.0 33.0 39.0 23.0 41.0 43 33.42552362422915 35.0 33.0 39.0 23.0 41.0 44 33.39754636983702 35.0 33.0 38.0 23.0 41.0 45 33.434906232681094 35.0 33.0 38.0 23.0 41.0 46 33.49270146133509 35.0 33.0 38.0 23.0 41.0 47 33.43988804999718 35.0 33.0 38.0 23.0 41.0 48 33.473941970311614 35.0 33.0 38.0 23.0 41.0 49 33.54262239898115 35.0 33.0 38.0 24.0 41.0 50 33.294733968062246 35.0 33.0 38.0 24.0 40.0 51 32.99125416972173 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 6.0 11 1.0 12 8.0 13 10.0 14 28.0 15 77.0 16 221.0 17 576.0 18 1482.0 19 3144.0 20 5736.0 21 9553.0 22 15112.0 23 22976.0 24 33271.0 25 47117.0 26 60913.0 27 69301.0 28 75401.0 29 85812.0 30 103045.0 31 129498.0 32 170084.0 33 233584.0 34 450423.0 35 683507.0 36 179522.0 37 214514.0 38 306679.0 39 416461.0 40 201.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.747766831300797 24.114394652389333 30.88401264877118 14.253825867538689 2 32.06697954082659 25.192728614062705 30.54003791738278 12.200253927727937 3 26.764874556507962 26.104499728322043 34.379120185325654 12.751505529844342 4 25.633741950240896 27.893385312272944 33.90896513149786 12.563907605988305 5 22.59908560703524 32.160190846607584 32.56208737874318 12.678636167613998 6 20.59231520549733 39.863699937346816 30.2433469036699 9.300637953485962 7 85.68496748453335 4.954001591794753 8.139037636211913 1.2219932874599904 8 87.65304298900601 3.065425416339312 8.05137139356176 1.2301602010929198 9 84.48702289478213 4.379394424860929 9.267096348786882 1.8664863315700635 10 63.280441266480366 16.604781953953676 13.505393025937936 6.609383753628023 11 60.19482458765374 14.282545678210944 18.57083833217761 6.951791401957709 12 51.831242030855265 20.789406036343667 19.34823207415196 8.031119858649108 13 17.75071144064055 54.17565855912137 19.721077297275958 8.352552702962118 14 10.204935287003728 52.85861565690766 27.98575280409925 8.950696251989367 15 7.809678967967315 21.603957728537214 61.816333646448584 8.770029657046887 16 9.050537524557246 15.661940404434002 59.10356219074595 16.183959880262798 17 10.071582545949436 15.613300557188436 32.041544577335095 42.273572319527034 18 16.36064849513315 20.797241451637255 47.04214579477782 15.799964258451777 19 35.03614989390546 17.651201666412017 29.23526045372479 18.07738798595773 20 34.21623395585708 19.969701051783957 30.038812428294648 15.775252564064315 21 17.08997497790262 33.49203062924111 32.311233544497775 17.106760848358498 22 18.991298771316472 23.080330787124726 23.0444084216249 34.883962019933904 23 11.914894129978087 34.13218405872704 27.387398301583328 26.565523509711547 24 10.354802672599885 20.253463630262424 56.87987133042639 12.511862366711298 25 9.786403565475593 23.662140508886115 50.96672449805878 15.584731427579518 26 8.6710321984337 43.5147623744563 30.70195978804599 17.112245639064007 27 8.98101328193301 51.700872774855064 28.515246060669618 10.802867882542303 28 8.205337304080714 33.33640722702543 46.88585939588346 11.572396073010399 29 9.021305398269638 25.35567511595661 44.99083407091714 20.63218541485661 30 14.547684077260811 41.71418393999036 31.17868453623533 12.559447446513497 31 34.31779299254701 28.702331668910308 27.241870530611312 9.73800480793137 32 38.758062566996564 20.583425022760373 30.701899515620656 9.956612894622403 33 37.640280302941264 25.67683673435561 21.401593060474035 15.281289902229087 34 19.205687788234037 25.762363305906366 25.716495990226225 29.315452915633372 35 18.765247040096533 23.6606638344654 37.08827529550817 20.4858138299299 36 39.56095154488774 25.05292672349754 23.638543854367356 11.74757787724737 37 16.415436129762913 45.16538301468809 27.715099478131204 10.70408137741779 38 16.61083933269987 44.82282468529507 21.9049280844489 16.661407897556163 39 19.434270961318063 40.82016305499226 26.48065993483948 13.264906048850197 40 29.032564287322266 23.437294226172877 24.89245139104237 22.63769009546248 41 13.468476165420082 23.05959707280939 27.948775671156056 35.52315109061447 42 16.49568886409683 19.379151828348952 26.883219463653766 37.24193984390045 43 16.31155660469757 19.676234612826516 30.752016037286932 33.26019274518898 44 11.230561012721399 30.699669435883248 36.98828334187695 21.081486209518403 45 10.988024773172262 52.69325825800033 22.546980095332895 13.771736873494508 46 18.34795090328777 42.40252517353185 24.323359151026725 14.926164772153658 47 16.92003687466982 29.534513045514423 25.872571435631915 27.672878644183847 48 18.10900087304608 26.59659394497188 41.36894348766992 13.925461694312121 49 22.546226690016205 26.056040698352483 39.56212685718178 11.835605754449537 50 18.392251135909195 44.98242606758287 24.255401991461206 12.36992080504673 51 15.490555762993152 40.886251769372386 25.3013997969422 18.32179267069226 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5037.0 1 7639.0 2 10241.0 3 20727.5 4 31214.0 5 24794.5 6 18375.0 7 19374.5 8 20374.0 9 21847.0 10 23320.0 11 23241.0 12 23162.0 13 23054.0 14 22946.0 15 21213.5 16 19481.0 17 18555.0 18 17629.0 19 16430.5 20 15232.0 21 15965.5 22 16699.0 23 17288.0 24 17877.0 25 22398.0 26 30552.0 27 34185.0 28 40350.5 29 46516.0 30 62869.5 31 79223.0 32 90395.0 33 101567.0 34 104955.5 35 108344.0 36 117546.0 37 126748.0 38 165888.5 39 205029.0 40 292971.5 41 380914.0 42 458516.0 43 536118.0 44 503066.0 45 470014.0 46 401148.0 47 332282.0 48 282984.5 49 233687.0 50 189452.0 51 145217.0 52 114171.0 53 83125.0 54 63416.5 55 43708.0 56 35984.0 57 28260.0 58 25618.5 59 22977.0 60 20686.0 61 18395.0 62 17208.0 63 16021.0 64 13796.5 65 11572.0 66 9720.5 67 7869.0 68 6894.5 69 5920.0 70 5355.0 71 4790.0 72 4018.0 73 3246.0 74 2608.5 75 1504.5 76 1038.0 77 766.0 78 494.0 79 374.5 80 255.0 81 187.5 82 120.0 83 96.5 84 73.0 85 50.5 86 28.0 87 26.5 88 25.0 89 19.0 90 13.0 91 10.5 92 8.0 93 7.0 94 6.0 95 4.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3318267.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.247473514277011 #Duplication Level Percentage of deduplicated Percentage of total 1 80.1599875522117 11.420772995549111 2 7.773462547893205 2.2150440353066547 3 2.6397646551261023 1.128299310235012 4 1.3695305889186775 0.7804940317044423 5 0.9119357577070346 0.6496390277326558 6 0.6636135370562585 0.5672889775754838 7 0.5146794559826712 0.5133017342218927 8 0.40145239037519315 0.45757458392910083 9 0.3505666907655526 0.4495220677502955 >10 3.4387554634676873 10.267882257431465 >50 0.48580686556965413 4.876512359248002 >100 1.0019296193759937 37.36124396061823 >500 0.25979104944461484 23.231877426577555 >1k 0.02851105702340572 5.6020979192907845 >5k 0.0 0.0 >10k+ 2.1276908226422182E-4 0.4784493128292945 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15783 0.47563984453330604 No Hit GGCTCTGGGCTCCTCTACAAAAACAAAAGTTAAAAAAAAACACACAAAAAG 3374 0.10167958154060538 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3360 0.10125767456325849 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01383252161444513 0.0 2 0.0 0.0 0.0 0.05909711304123508 0.0 3 0.0 0.0 0.0 0.08661147520678716 0.0 4 0.0 0.0 0.0 0.12425160482866508 0.0 5 0.0 0.0 0.0 0.21526296708492718 0.0 6 0.0 0.0 0.0 0.30075940242301175 0.0 7 0.0 0.0 0.0 0.36308109021968393 0.0 8 0.0 0.0 0.0 0.48257117344686246 0.0 9 0.0 0.0 0.0 0.5364547216965965 0.0 10 0.0 0.0 0.0 0.6286413962468963 0.0 11 0.0 0.0 0.0 0.7419234196645418 0.0 12 0.0 0.0 0.0 0.8335676423868242 0.0 13 0.0 0.0 0.0 0.8744323467641393 0.0 14 0.0 0.0 0.0 0.8908867188806687 0.0 15 0.0 0.0 0.0 0.9177682205802005 0.0 16 0.0 0.0 0.0 0.9810844033949047 0.0 17 0.0 0.0 0.0 1.0534715862225674 0.0 18 0.0 0.0 0.0 1.1688028721016122 0.0 19 0.0 0.0 0.0 1.2195221180212443 0.0 20 0.0 0.0 0.0 1.2781370516597972 0.0 21 0.0 0.0 0.0 1.3604691846677799 0.0 22 0.0 0.0 0.0 1.4355384904228623 0.0 23 0.0 0.0 0.0 1.53438526797271 0.0 24 0.0 0.0 0.0 1.6038191019589443 0.0 25 0.0 0.0 0.0 1.6659599724796106 0.0 26 0.0 0.0 0.0 1.7352732616151745 0.0 27 0.0 0.0 0.0 1.8067864942754757 0.0 28 0.0 0.0 0.0 1.8745929727776578 0.0 29 0.0 0.0 0.0 1.9562018366816172 0.0 30 0.0 0.0 0.0 2.0735522488093934 0.0 31 0.0 0.0 0.0 2.1770098668973894 0.0 32 0.0 0.0 0.0 2.2669363254976167 0.0 33 0.0 0.0 0.0 2.3581285050298844 0.0 34 0.0 0.0 0.0 2.4650819237873263 0.0 35 0.0 0.0 0.0 2.6159438044015144 0.0 36 0.0 0.0 0.0 2.72820119658846 0.0 37 0.0 0.0 0.0 2.834732708368555 0.0 38 0.0 0.0 0.0 2.9558200108671184 0.0 39 0.0 0.0 0.0 3.129103233706028 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCGT 30 2.1667456E-6 45.000004 14 ACGGGTA 250 0.0 45.000004 5 CGTTACC 60 0.0 45.000004 42 TACGAGT 45 3.8562575E-10 45.000004 29 CTCGACG 45 3.8562575E-10 45.000004 1 TTACGCG 60 0.0 45.000004 1 GCTCGAT 30 2.1667456E-6 45.000004 38 TGCAACG 45 3.8562575E-10 45.000004 1 TCGTTAG 85 0.0 45.0 1 TCCGATT 95 0.0 45.0 43 GCAACGA 20 7.0352136E-4 45.0 20 GCACGTT 25 3.8924038E-5 45.0 36 TACGCCT 20 7.0352136E-4 45.0 4 GTATCGA 40 6.8212103E-9 45.0 45 TAGTGCA 35 1.2128476E-7 45.0 17 TAGTCCG 70 0.0 45.0 1 TACCGCG 35 1.2128476E-7 45.0 1 AAGTCGC 40 6.8212103E-9 45.0 42 CGGCGTA 65 0.0 44.999996 21 TTACGTG 260 0.0 44.134613 1 >>END_MODULE