##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545078_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1585489 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.946785502769178 31.0 31.0 33.0 30.0 33.0 2 31.25910555040117 31.0 31.0 33.0 30.0 34.0 3 31.42328392060746 31.0 31.0 34.0 30.0 34.0 4 35.28710763682372 37.0 35.0 37.0 33.0 37.0 5 35.16237892536624 37.0 35.0 37.0 32.0 37.0 6 35.25328274116061 37.0 35.0 37.0 32.0 37.0 7 35.57844614500637 36.0 35.0 37.0 35.0 37.0 8 35.630549943897435 37.0 35.0 37.0 35.0 37.0 9 37.468915899132696 39.0 37.0 39.0 35.0 39.0 10 37.07105252701217 39.0 37.0 39.0 33.0 39.0 11 36.651451381876505 39.0 35.0 39.0 32.0 39.0 12 35.08787446648952 35.0 35.0 39.0 31.0 39.0 13 34.56731456351952 35.0 33.0 39.0 29.0 39.0 14 35.1715344603463 35.0 33.0 40.0 27.0 41.0 15 35.63480541334566 35.0 34.0 40.0 30.0 41.0 16 35.86487071181194 35.0 34.0 40.0 32.0 41.0 17 35.73932963268746 35.0 34.0 40.0 31.0 41.0 18 35.873300918517884 36.0 35.0 39.0 31.0 41.0 19 35.7547343437892 36.0 35.0 39.0 31.0 41.0 20 35.465789418911136 35.0 34.0 39.0 31.0 41.0 21 35.31356698154323 35.0 34.0 39.0 30.0 41.0 22 35.14181681487541 35.0 34.0 39.0 30.0 41.0 23 35.1013100690071 35.0 34.0 39.0 30.0 41.0 24 35.20795981555217 35.0 34.0 39.0 30.0 41.0 25 35.12911221711409 35.0 34.0 39.0 30.0 41.0 26 34.92477462789083 35.0 34.0 39.0 30.0 41.0 27 34.89506770466399 35.0 34.0 39.0 29.0 41.0 28 35.0258885429038 35.0 34.0 39.0 30.0 41.0 29 35.048874511270654 36.0 34.0 39.0 30.0 41.0 30 35.006341891996726 36.0 34.0 39.0 29.0 41.0 31 34.70890494982936 35.0 34.0 39.0 29.0 41.0 32 34.53960197768638 35.0 34.0 39.0 29.0 41.0 33 34.32234660726123 35.0 33.0 39.0 27.0 41.0 34 34.15908530428152 35.0 34.0 39.0 27.0 41.0 35 33.95353736292084 35.0 33.0 39.0 25.0 41.0 36 33.681380949347485 35.0 33.0 39.0 23.0 41.0 37 33.73572632796569 35.0 33.0 39.0 24.0 41.0 38 33.80469621675079 35.0 33.0 39.0 24.0 41.0 39 33.82415772042569 35.0 33.0 39.0 24.0 41.0 40 33.4965572135789 35.0 33.0 39.0 23.0 41.0 41 33.62011089323231 35.0 33.0 39.0 23.0 41.0 42 33.59207348647641 35.0 33.0 39.0 23.0 41.0 43 33.58326926266912 35.0 33.0 39.0 23.0 41.0 44 33.57285544081353 35.0 33.0 39.0 23.0 41.0 45 33.620466619446745 35.0 33.0 39.0 23.0 41.0 46 33.66407272456637 35.0 33.0 39.0 24.0 41.0 47 33.61063242949021 35.0 33.0 38.0 24.0 41.0 48 33.64773202463088 35.0 33.0 38.0 23.0 41.0 49 33.71024523033588 35.0 33.0 38.0 24.0 41.0 50 33.46914106625779 35.0 33.0 38.0 24.0 41.0 51 33.178112872432415 35.0 32.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 0.0 12 5.0 13 10.0 14 18.0 15 40.0 16 98.0 17 272.0 18 748.0 19 1568.0 20 2710.0 21 4655.0 22 7263.0 23 10861.0 24 15821.0 25 21990.0 26 28359.0 27 33059.0 28 37120.0 29 42143.0 30 51593.0 31 64394.0 32 84251.0 33 114937.0 34 217496.0 35 313925.0 36 83766.0 37 101502.0 38 146334.0 39 200470.0 40 78.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.45030397561888 25.17135092075694 29.750884427454245 12.627460676169939 2 30.326290500911707 27.377925674665672 30.601284524837446 11.694499299585177 3 28.945202394970888 26.007181380633988 32.88928526151869 12.158330962876438 4 28.64649329008274 27.121727113843107 31.517342599034116 12.71443699704003 5 22.18243078318424 33.685128058283595 31.01655072977485 13.115890428757309 6 20.411620641959676 41.59303533483991 28.5798261608879 9.41551786231251 7 85.6083517451083 5.658632762510494 7.251705940564709 1.4813095518165058 8 88.05649235030958 4.2842302910963115 6.461476553921219 1.19780080467288 9 83.05633151664881 7.004778967246067 8.04256604744656 1.8963234686585653 10 63.42327193692293 18.50009681555659 12.009102554480037 6.067528693040444 11 61.97078629999956 15.458133105937662 16.25485891103628 6.316221683026499 12 53.9224806983839 21.730141300255003 17.436576349630933 6.91080165173016 13 17.524751038953912 56.6241077673828 17.789779683113537 8.061361510549741 14 9.472850331979597 56.3277323273766 25.096421356439556 9.102995984204243 15 9.494294820083898 22.515829501182285 59.49590315669172 8.493972522042096 16 9.54740146415396 17.013173853618664 58.03887633405215 15.400548348175233 17 9.582532581430714 17.746764562857265 30.805700954090504 41.86500190162152 18 16.031394730584697 22.71646160900517 45.35471390845348 15.897429751956652 19 36.82466418877709 17.897254411730387 27.815140943898065 17.462940455594456 20 35.44395451497929 21.532978153743105 28.108615070807808 14.9144522604698 21 16.77961814935329 37.428137312841656 29.557253314277173 16.234991223527885 22 18.48237357685862 25.879334388318053 20.45192366519099 35.18636836963233 23 13.315008808008127 35.71459656926034 25.312506110102312 25.657888512629228 24 10.04201227507728 21.38210987272696 56.4739963506527 12.101881501543058 25 8.665780714971847 26.31339605635864 50.45578998025215 14.565033248417365 26 8.571551111360597 46.24447094871046 28.667811634139373 16.51616630578957 27 9.99281609648506 52.95041466702071 26.622764333275097 10.434004903219133 28 7.941966169427856 35.765243404400785 45.400567269782385 10.892223156388974 29 9.110249266945402 27.975470028489635 42.51489603522951 20.399384669335454 30 14.557086173414008 45.78177458184825 27.859291360583395 11.801847884154352 31 36.38278158978082 30.076525286520432 24.29181154836142 9.248881575337325 32 38.850852954514345 22.650172911953348 28.653241996633216 9.84573213689909 33 37.874813385649475 27.44276371516926 20.346593385384573 14.335829513796691 34 19.10672354081296 27.210784811499796 23.81095043863439 29.871541209052854 35 19.768285998830645 23.76326798861424 36.46723502969746 20.001210982857653 36 39.40765278094014 26.94777447210293 22.47281438092601 11.171758366030922 37 15.527890764300478 48.456280680597594 26.496872573698084 9.518955981403844 38 15.363840430302576 47.82966012378515 20.5392784182041 16.26722102770817 39 20.633066517648498 42.676486560297796 24.626030202669334 12.064416719384367 40 30.055711518654498 23.59209051592285 23.929904275589422 22.422293689833232 41 12.711157251800548 24.22545977928576 26.135974453307465 36.927408515606224 42 14.672949481201067 21.422349823934443 25.896931482968345 38.00776921189614 43 16.737486037430724 20.851043432026334 28.301867751841858 34.10960277870108 44 11.127923309464776 32.79221741683481 36.27366698854423 19.806192285156186 45 10.850280260537916 56.09310439870602 19.86264174648957 13.1939735942665 46 16.81531691484457 46.73517129415593 21.841652638397367 14.607859152602131 47 17.21115693644043 30.292357752087838 24.320446247183046 28.176039064288684 48 17.870574945647682 27.703314245636516 40.936644782776796 13.489466025939 49 21.632316591285086 28.266610490517436 38.925845590855566 11.175227327341911 50 17.856699100403723 47.681125507650954 22.532165155355855 11.930010236589467 51 16.96845578871881 42.23636997796894 23.55677018257459 17.23840405073766 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1805.0 1 2696.0 2 3587.0 3 7744.5 4 11902.0 5 9707.0 6 7512.0 7 7780.0 8 8048.0 9 8382.5 10 8717.0 11 8700.0 12 8683.0 13 8236.0 14 7789.0 15 7532.5 16 7276.0 17 6361.5 18 5447.0 19 5701.5 20 5956.0 21 7243.5 22 8531.0 23 8914.0 24 9297.0 25 11313.5 26 16502.0 27 19674.0 28 28225.0 29 36776.0 30 41657.5 31 46539.0 32 54247.0 33 61955.0 34 61992.0 35 62029.0 36 61653.0 37 61277.0 38 74694.5 39 88112.0 40 137163.0 41 186214.0 42 224019.5 43 261825.0 44 248543.5 45 235262.0 46 195378.5 47 155495.0 48 126158.0 49 96821.0 50 80988.5 51 65156.0 52 49873.5 53 34591.0 54 25983.5 55 17376.0 56 14560.0 57 11744.0 58 10580.0 59 9416.0 60 8583.0 61 7750.0 62 6901.5 63 6053.0 64 5163.0 65 4273.0 66 3588.5 67 2904.0 68 2521.5 69 2139.0 70 1867.0 71 1595.0 72 1352.0 73 1109.0 74 940.0 75 580.5 76 390.0 77 279.0 78 168.0 79 143.0 80 118.0 81 78.0 82 38.0 83 32.0 84 26.0 85 15.5 86 5.0 87 4.0 88 3.0 89 3.0 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1585489.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.616519467450805 #Duplication Level Percentage of deduplicated Percentage of total 1 79.87856386584095 11.675465837770767 2 6.686308224622373 1.954611086611387 3 2.5486528235813473 1.1175730083495066 4 1.5124265411105948 0.8842564792492917 5 1.0287098163170285 0.7518078528277796 6 0.8331470356338164 0.7306625919354365 7 0.648311905087072 0.6633244507179715 8 0.5275479103391585 0.6168731441188241 9 0.4382604451914014 0.5765258096058399 >10 3.374480016825471 9.77857480763135 >50 0.6987874790091233 7.426840111874768 >100 1.7495632054130374 54.758195482409086 >500 0.06615995314587116 6.394205638689515 >1k 0.007351105905096795 1.3081427155491108 >5k 0.001729671977669834 1.3629409826593721 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 5689 0.35881674360402377 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5551 0.350112804314631 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 5241 0.33056047692541546 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 5083 0.3205950971592991 No Hit GAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 1661 0.10476263159189374 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01608336607822571 0.0 2 0.0 0.0 0.0 0.050079186925926326 0.0 3 0.0 0.0 0.0 0.06912693812445246 0.0 4 0.0 0.0 0.0 0.09832928516060345 0.0 5 0.0 0.0 0.0 0.18101670840983444 0.0 6 0.0 0.0 0.0 0.24598089296109907 0.0 7 0.0 0.0 0.0 0.2915188941708205 0.0 8 0.0 0.0 0.0 0.3841716971861678 0.0 9 0.0 0.0 0.0 0.4182305900577046 0.0 10 0.0 0.0 0.0 0.4842039269903481 0.0 11 0.0 0.0 0.0 0.5492311835654489 0.0 12 0.0 0.0 0.0 0.6128708556161537 0.0 13 6.307202383617925E-5 0.0 0.0 0.6408748341994174 0.0 14 6.307202383617925E-5 0.0 0.0 0.6503356377748443 0.0 15 6.307202383617925E-5 0.0 0.0 0.6679958044489744 0.0 16 6.307202383617925E-5 0.0 0.0 0.7070373872035693 0.0 17 6.307202383617925E-5 0.0 0.0 0.7542783330568676 0.0 18 6.307202383617925E-5 0.0 0.0 0.8307216259463169 0.0 19 6.307202383617925E-5 0.0 0.0 0.8653481670323793 0.0 20 6.307202383617925E-5 0.0 0.0 0.8976410432365031 0.0 21 6.307202383617925E-5 0.0 0.0 0.9545320087367367 0.0 22 6.307202383617925E-5 0.0 0.0 1.0090893093550317 0.0 23 6.307202383617925E-5 0.0 0.0 1.0737381337871155 0.0 24 6.307202383617925E-5 0.0 0.0 1.1217359439264478 0.0 25 6.307202383617925E-5 0.0 0.0 1.1625435433484559 0.0 26 6.307202383617925E-5 0.0 0.0 1.2112982177738225 0.0 27 6.307202383617925E-5 0.0 0.0 1.252231961243503 0.0 28 6.307202383617925E-5 0.0 0.0 1.2960039457858112 0.0 29 6.307202383617925E-5 0.0 0.0 1.3482906535460037 0.0 30 6.307202383617925E-5 0.0 0.0 1.4258692428645043 0.0 31 6.307202383617925E-5 0.0 0.0 1.5022494637301174 0.0 32 6.307202383617925E-5 0.0 0.0 1.5652584155424605 0.0 33 6.307202383617925E-5 0.0 0.0 1.6275735750926055 0.0 34 6.307202383617925E-5 0.0 0.0 1.7003586905995562 0.0 35 6.307202383617925E-5 0.0 0.0 1.805436682310631 0.0 36 6.307202383617925E-5 0.0 0.0 1.8891332579412408 0.0 37 6.307202383617925E-5 0.0 0.0 1.97333440976254 0.0 38 6.307202383617925E-5 0.0 0.0 2.048894694318283 0.0 39 6.307202383617925E-5 0.0 0.0 2.1275455080419983 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCACGG 165 0.0 45.000004 2 GCATAAC 20 7.034098E-4 45.0 13 CTTCGAC 25 3.8914783E-5 45.0 23 GATACCC 25 3.8914783E-5 45.0 8 TCGTTAA 25 3.8914783E-5 45.0 30 TCGCACG 40 6.8175723E-9 45.0 1 AAATCGG 45 3.8562575E-10 45.0 2 AGTTTCG 25 3.8914783E-5 45.0 36 CTCCGCG 35 1.21232E-7 45.0 1 GCGAATG 35 1.21232E-7 45.0 1 CCTAGCG 20 7.034098E-4 45.0 1 TAGCGTC 20 7.034098E-4 45.0 12 CTATACG 25 3.8914783E-5 45.0 1 CGGTTCG 20 7.034098E-4 45.0 30 CGTGAAT 35 1.21232E-7 45.0 23 AGCTTCG 25 3.8914783E-5 45.0 1 TAGAACG 40 6.8175723E-9 45.0 1 TCGGGTA 25 3.8914783E-5 45.0 27 GCACGCA 20 7.034098E-4 45.0 9 CCTACGG 20 7.034098E-4 45.0 2 >>END_MODULE