##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545077_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3440984 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.865980777591528 31.0 31.0 33.0 30.0 33.0 2 31.174100489859878 31.0 31.0 33.0 30.0 34.0 3 31.350706658327965 31.0 31.0 34.0 30.0 34.0 4 35.19972658983593 37.0 35.0 37.0 33.0 37.0 5 35.06536705779509 37.0 35.0 37.0 32.0 37.0 6 35.13378673077236 37.0 35.0 37.0 32.0 37.0 7 35.51888645805967 36.0 35.0 37.0 35.0 37.0 8 35.583665021400854 37.0 35.0 37.0 35.0 37.0 9 37.420180680875006 39.0 37.0 39.0 35.0 39.0 10 36.96888273819349 39.0 37.0 39.0 33.0 39.0 11 36.493769514766704 38.0 35.0 39.0 32.0 39.0 12 34.9734195218577 35.0 34.0 39.0 30.0 39.0 13 34.464055630598686 35.0 33.0 39.0 27.0 39.0 14 35.06603024018711 35.0 33.0 40.0 27.0 41.0 15 35.55480496276646 35.0 33.0 40.0 30.0 41.0 16 35.7952109047877 35.0 34.0 40.0 31.0 41.0 17 35.652196290363456 35.0 34.0 40.0 31.0 41.0 18 35.77065048834868 36.0 35.0 39.0 31.0 41.0 19 35.63406426766297 36.0 34.0 39.0 31.0 41.0 20 35.32849411679915 35.0 34.0 39.0 30.0 41.0 21 35.19890967234954 35.0 34.0 39.0 30.0 41.0 22 35.03635152037906 35.0 34.0 39.0 29.0 41.0 23 34.98575204069534 35.0 34.0 39.0 29.0 41.0 24 35.09770722560756 35.0 34.0 39.0 30.0 41.0 25 35.03583887632142 35.0 34.0 39.0 30.0 41.0 26 34.789187918339636 35.0 34.0 39.0 29.0 41.0 27 34.75307324881487 35.0 34.0 39.0 29.0 41.0 28 34.85136722518907 35.0 34.0 39.0 29.0 41.0 29 34.85742566661165 35.0 34.0 39.0 29.0 41.0 30 34.84875024121007 36.0 34.0 39.0 29.0 41.0 31 34.568295871181036 35.0 34.0 39.0 29.0 41.0 32 34.40288068761726 35.0 34.0 39.0 28.0 41.0 33 34.174810170579114 35.0 33.0 39.0 27.0 41.0 34 34.000035164359964 35.0 33.0 39.0 25.0 41.0 35 33.80076251444354 35.0 33.0 39.0 24.0 41.0 36 33.50421187660274 35.0 33.0 39.0 23.0 41.0 37 33.54080373521062 35.0 33.0 39.0 23.0 41.0 38 33.6100275386343 35.0 33.0 39.0 24.0 41.0 39 33.6402988214999 35.0 33.0 39.0 23.0 41.0 40 33.31371375164778 35.0 32.0 39.0 23.0 41.0 41 33.422275430516386 35.0 33.0 39.0 23.0 41.0 42 33.40668366955499 35.0 33.0 39.0 23.0 41.0 43 33.38337289566008 35.0 33.0 39.0 23.0 41.0 44 33.36879421700304 35.0 33.0 38.0 23.0 41.0 45 33.445485651778675 35.0 33.0 38.0 23.0 41.0 46 33.45402855694766 35.0 33.0 38.0 23.0 41.0 47 33.36937544609333 35.0 33.0 38.0 23.0 41.0 48 33.42870702101492 35.0 33.0 38.0 23.0 41.0 49 33.50294189104047 35.0 33.0 38.0 24.0 41.0 50 33.3083350576463 35.0 33.0 38.0 24.0 41.0 51 33.00382594048679 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 3.0 11 2.0 12 7.0 13 11.0 14 27.0 15 72.0 16 238.0 17 743.0 18 1908.0 19 4056.0 20 7200.0 21 11931.0 22 18279.0 23 26535.0 24 38132.0 25 52348.0 26 66719.0 27 76631.0 28 85632.0 29 97353.0 30 116979.0 31 144116.0 32 184895.0 33 246538.0 34 458891.0 35 671620.0 36 180740.0 37 214930.0 38 305296.0 39 428933.0 40 214.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.985758724829875 25.273875147341574 30.86901886204644 12.871347265782113 2 28.906963821976504 27.557872980519527 31.102527649067824 12.432635548436146 3 28.445090125382738 26.133454848961808 32.79820539706084 12.62324962859461 4 25.707995154874304 28.51402389549036 32.421045840375896 13.356935109259444 5 22.471595334357847 32.91163225402966 31.41769912327404 13.199073288338454 6 20.61860793307961 41.56395379926207 28.26118924121705 9.556249026441273 7 85.83980628796878 5.621764007039847 7.100265505448442 1.4381641995429213 8 88.61279215480224 3.7297470723490727 6.40418554692495 1.2532752259237474 9 84.24744201077367 6.005869251353682 7.726510788774374 2.020177949098281 10 63.50709564473418 18.48119607647115 12.180033385798945 5.831674892995724 11 60.58191494061001 14.798354191707952 17.495867461168086 7.12386340651395 12 54.65192514699284 20.83903906556962 17.53079932949412 6.978236457943425 13 16.648290140262205 57.29276858015033 17.977067025013778 8.081874254573691 14 8.843400608663103 56.1231903432274 25.103080979161774 9.93032806894772 15 8.340375892477269 22.643987882535928 60.34634279031812 8.669293434668687 16 8.63540777870516 16.368457394745224 58.01843309936925 16.977701727180364 17 8.912276255861695 17.52551014477254 30.00412091425011 43.55809268511565 18 14.930467563929387 22.37275732755514 46.548981337896365 16.147793770619103 19 34.42730335276188 19.50389772227944 26.80105458206141 19.267744342897263 20 33.58533489257724 21.312624528332595 29.658754588803664 15.443285990286498 21 15.259181675939207 36.588894339526135 31.218918774397093 16.933005210137566 22 19.08974293399795 25.249725078640296 20.865979033904257 34.7945529534575 23 12.91386417373635 35.544861586104446 24.979395428749452 26.561878811409763 24 9.966945501635578 20.775423541638087 57.33516924228651 11.922461714439823 25 8.573187204590313 26.979550035687467 49.62345073385985 14.82381202586237 26 8.980977534333203 44.81520402303527 27.821402250054057 18.382416192577473 27 9.639335724897297 52.6882136040156 25.642287206217755 12.030163464869352 28 7.619651820525757 36.3202211925426 44.03336371224045 12.026763274691193 29 8.203380195897452 26.7403452035813 41.79089469756326 23.265379902957992 30 12.887418250128452 46.45342727545377 28.17653322421726 12.482621250200523 31 34.044447750992155 31.56599972565987 23.587787679338234 10.801764844009737 32 36.86085143086977 23.501242667795026 28.904871397251487 10.733034504083715 33 35.584646717334344 29.208360166743002 19.280763874519614 15.926229241403039 34 17.13849875500729 27.798937745714596 24.370180157768825 30.692383341509288 35 18.960768198864045 23.78090104458492 35.51641042213507 21.74192033441597 36 39.17629375783206 26.68463439527763 21.985106585790575 12.153965261099732 37 14.73970817649835 45.77417389909398 28.215504634720766 11.270613289686903 38 14.66513648421498 44.71345987078115 22.83117271106172 17.79023093394215 39 19.36963380242396 41.111670382657984 26.114390534800506 13.404305280117548 40 28.38295673563144 23.765411289328867 23.893950102645057 23.95768187239464 41 11.657334064907015 23.764684752966012 28.191267381655944 36.38671380047103 42 14.48501358913613 20.600299216735678 27.01404598219579 37.9006412119324 43 16.28786998137742 20.91006526040226 29.832396779525855 32.96966797869447 44 10.481187939263885 32.58538836565354 35.09658865022331 21.836835044859264 45 10.09304315277258 56.27323463288408 19.952490334160228 13.681231880183113 46 17.920339065802107 45.39739214131772 21.60585460438061 15.076414188499568 47 16.354333527851335 30.398601097825505 25.615870344064373 27.631195030258787 48 16.885954715279116 28.040874354545096 40.67008158131511 14.403089348860675 49 21.407248624230743 27.46385917516617 38.37504039542177 12.75385180518131 50 18.38168965621462 46.14459119833164 23.0068492035999 12.466869941853842 51 15.33828695512679 40.88342171890366 23.924493691339453 19.853797634630094 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5219.0 1 6642.5 2 8066.0 3 15583.0 4 23100.0 5 18926.5 6 14753.0 7 15940.5 8 17128.0 9 18359.5 10 19591.0 11 19569.0 12 19547.0 13 19775.0 14 20003.0 15 18541.0 16 17079.0 17 15383.0 18 13687.0 19 13586.5 20 13486.0 21 13258.0 22 13030.0 23 15719.5 24 18409.0 25 21890.0 26 33887.5 27 42404.0 28 55448.5 29 68493.0 30 83504.5 31 98516.0 32 106251.5 33 113987.0 34 124988.5 35 135990.0 36 134961.5 37 133933.0 38 170181.0 39 206429.0 40 305511.5 41 404594.0 42 490470.0 43 576346.0 44 541839.5 45 507333.0 46 429098.5 47 350864.0 48 294981.0 49 239098.0 50 190481.0 51 141864.0 52 109243.0 53 76622.0 54 56144.0 55 35666.0 56 28609.5 57 21553.0 58 18583.5 59 15614.0 60 14442.0 61 13270.0 62 11421.5 63 9573.0 64 8191.5 65 6810.0 66 5412.0 67 4014.0 68 3579.5 69 3145.0 70 2879.0 71 2613.0 72 2166.5 73 1720.0 74 1346.0 75 753.5 76 535.0 77 418.5 78 302.0 79 221.5 80 141.0 81 101.0 82 61.0 83 44.5 84 28.0 85 19.0 86 10.0 87 10.0 88 10.0 89 6.5 90 3.0 91 1.5 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3440984.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.096718583809276 #Duplication Level Percentage of deduplicated Percentage of total 1 80.22902371341756 11.309659695418086 2 8.387954772351492 2.364852758391179 3 2.8124766855725096 1.1894007708012095 4 1.370652692707019 0.7728682114092504 5 0.8767893192655094 0.6179926145487796 6 0.5922114646555733 0.5008943015613079 7 0.4492556998128445 0.44331218207037776 8 0.3689234366419501 0.416048789225069 9 0.30808554771111124 0.3908695739240053 >10 2.8758410269301846 8.645757815989697 >50 0.4869699076111443 4.799900098965284 >100 0.9114794963297325 34.090845737280375 >500 0.2905716241389874 25.84170182655913 >1k 0.03893618341990708 7.711073599761842 >5k 6.213220758495811E-4 0.5566967719228335 >10k+ 2.0710735861652707E-4 0.3481252521715894 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11924 0.346528783627009 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 7017 0.2039242263259579 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 6359 0.18480178925563154 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 5692 0.16541779909467758 No Hit GAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 4592 0.13345019912908632 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3940 0.11450213078584498 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.035425913052777924 0.0 2 0.0 0.0 0.0 0.11583895769349697 0.0 3 0.0 0.0 0.0 0.15853023437481836 0.0 4 0.0 0.0 0.0 0.2322010215682491 0.0 5 0.0 0.0 0.0 0.42362882245311223 0.0 6 0.0 0.0 0.0 0.5501623954078252 0.0 7 0.0 0.0 0.0 0.6518774862074337 0.0 8 0.0 0.0 0.0 0.8458626950895441 0.0 9 0.0 0.0 0.0 0.9164529681044724 0.0 10 0.0 0.0 0.0 1.081551091199494 0.0 11 0.0 0.0 0.0 1.2269164866793918 0.0 12 0.0 0.0 0.0 1.380244720696173 0.0 13 0.0 0.0 0.0 1.4367692497262412 0.0 14 0.0 0.0 0.0 1.4568507147955352 0.0 15 0.0 0.0 0.0 1.4958221252990425 0.0 16 0.0 0.0 0.0 1.5747820972140527 0.0 17 0.0 0.0 0.0 1.6691446400215753 0.0 18 0.0 0.0 0.0 1.8066634427826458 0.0 19 0.0 0.0 0.0 1.8764109336166632 0.0 20 0.0 0.0 0.0 1.940898301183615 0.0 21 0.0 0.0 0.0 2.0392132018050653 0.0 22 0.0 0.0 0.0 2.133343252976474 0.0 23 0.0 0.0 0.0 2.253454244483555 0.0 24 0.0 0.0 0.0 2.3479911560181623 0.0 25 0.0 0.0 0.0 2.4200926246678276 0.0 26 0.0 0.0 0.0 2.5015228202165427 0.0 27 0.0 0.0 0.0 2.5753389146825443 0.0 28 0.0 0.0 0.0 2.6542407636885263 0.0 29 0.0 0.0 0.0 2.7447671945001777 0.0 30 0.0 0.0 0.0 2.8755728012684743 0.0 31 0.0 0.0 0.0 2.9956256698665267 0.0 32 0.0 0.0 0.0 3.0958586264859123 0.0 33 0.0 0.0 0.0 3.1917323649281717 0.0 34 0.0 0.0 0.0 3.303793333534826 0.0 35 0.0 0.0 0.0 3.48095196025323 0.0 36 2.906145451417385E-5 0.0 0.0 3.6091129746607367 0.0 37 2.906145451417385E-5 0.0 0.0 3.7330891396182024 0.0 38 2.906145451417385E-5 0.0 0.0 3.8478528234946747 0.0 39 2.906145451417385E-5 0.0 0.0 3.961570295008637 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGCTT 35 1.2128658E-7 45.000004 8 GTTACGC 35 1.2128658E-7 45.000004 35 CTACCGT 35 1.2128658E-7 45.000004 38 TTACGCG 35 1.2128658E-7 45.000004 1 TCGAACG 35 1.2128658E-7 45.000004 1 GCATAAC 20 7.035251E-4 45.0 9 TCACGAC 135 0.0 45.0 25 TATCACG 80 0.0 45.0 1 AACCGTG 20 7.035251E-4 45.0 1 ATAGCGG 595 0.0 45.0 2 CCTGTCG 20 7.035251E-4 45.0 10 CACTGCG 45 3.8562575E-10 45.0 1 TAGTTCG 80 0.0 45.0 1 ATCCGAT 25 3.892434E-5 45.0 6 CATAGCG 25 3.892434E-5 45.0 1 TCGTCAC 90 0.0 45.0 18 CGGTCAG 40 6.8212103E-9 45.0 13 TAAGCGA 80 0.0 45.0 1 CGATATC 45 3.8562575E-10 45.0 10 TAGTCCG 40 6.8212103E-9 45.0 1 >>END_MODULE