##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545076_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1419324 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.899213287452337 31.0 31.0 33.0 30.0 33.0 2 31.22140751512692 31.0 31.0 33.0 30.0 34.0 3 31.392336774408097 31.0 31.0 34.0 30.0 34.0 4 35.22057895166995 37.0 35.0 37.0 33.0 37.0 5 35.08337701610062 37.0 35.0 37.0 32.0 37.0 6 35.164570598397546 37.0 35.0 37.0 32.0 37.0 7 35.54879012825824 36.0 35.0 37.0 35.0 37.0 8 35.63186488779165 37.0 35.0 37.0 35.0 37.0 9 37.542182757425365 39.0 37.0 39.0 35.0 39.0 10 37.05199587972866 39.0 37.0 39.0 33.0 39.0 11 36.54693713345226 39.0 35.0 39.0 32.0 39.0 12 34.74425853434452 35.0 34.0 39.0 30.0 39.0 13 34.154619382184755 35.0 33.0 39.0 26.0 39.0 14 34.68161744605178 35.0 33.0 40.0 25.0 41.0 15 35.27510279541528 35.0 33.0 40.0 30.0 41.0 16 35.58414287364971 35.0 34.0 40.0 31.0 41.0 17 35.49533369406844 35.0 34.0 39.0 31.0 41.0 18 35.62663352412839 36.0 35.0 39.0 31.0 41.0 19 35.49031651687705 36.0 34.0 39.0 31.0 41.0 20 35.14185133204258 35.0 34.0 39.0 30.0 41.0 21 34.95498068094388 35.0 34.0 39.0 30.0 41.0 22 34.781010537410765 35.0 34.0 39.0 29.0 41.0 23 34.783420839780064 35.0 34.0 38.0 29.0 41.0 24 34.934279276613374 35.0 34.0 39.0 30.0 41.0 25 34.85932810267423 35.0 34.0 38.0 30.0 41.0 26 34.62713446683069 35.0 34.0 38.0 29.0 41.0 27 34.622639369164474 35.0 34.0 38.0 29.0 41.0 28 34.789974663994975 35.0 34.0 38.0 29.0 41.0 29 34.81733346297251 35.0 34.0 38.0 29.0 41.0 30 34.7741157057867 35.0 34.0 38.0 29.0 41.0 31 34.43801626689889 35.0 34.0 38.0 29.0 41.0 32 34.27719040895525 35.0 34.0 38.0 29.0 41.0 33 34.01723355625636 35.0 33.0 38.0 27.0 41.0 34 33.86213366363142 35.0 33.0 38.0 26.0 41.0 35 33.647701300055516 35.0 33.0 38.0 25.0 41.0 36 33.31320473690292 35.0 33.0 38.0 23.0 41.0 37 33.37746349670688 35.0 33.0 38.0 23.0 41.0 38 33.515141010791055 35.0 33.0 38.0 24.0 41.0 39 33.517996595562394 35.0 33.0 38.0 24.0 41.0 40 33.17538278786239 35.0 32.0 38.0 23.0 41.0 41 33.31891872468866 35.0 33.0 38.0 23.0 41.0 42 33.28554368135817 35.0 33.0 38.0 23.0 41.0 43 33.235035833960396 35.0 33.0 38.0 23.0 41.0 44 33.24089918862783 35.0 33.0 38.0 23.0 41.0 45 33.32702399170309 35.0 33.0 38.0 23.0 40.0 46 33.33890006791966 35.0 33.0 38.0 23.0 40.0 47 33.29762689843898 35.0 33.0 38.0 23.0 40.0 48 33.3847373820213 35.0 33.0 38.0 23.0 40.0 49 33.468802049426344 35.0 33.0 38.0 24.0 40.0 50 33.22991367721535 35.0 33.0 38.0 24.0 40.0 51 32.89699744385355 35.0 32.0 37.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 1.0 14 7.0 15 21.0 16 95.0 17 300.0 18 774.0 19 1685.0 20 2958.0 21 4940.0 22 7627.0 23 11023.0 24 15442.0 25 21488.0 26 26830.0 27 31754.0 28 34663.0 29 40353.0 30 48278.0 31 60148.0 32 77681.0 33 104895.0 34 203003.0 35 309152.0 36 65051.0 37 76451.0 38 110441.0 39 164178.0 40 82.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.424993870321366 26.34754291479606 30.688905422581453 13.538557792301123 2 27.867773672537066 26.250383985615688 33.21750354394064 12.66433879790661 3 26.501841721833774 26.031617868788242 35.02709740693457 12.439443002443417 4 25.02233457617852 28.737060741592472 33.63002387051864 12.610580811710365 5 21.036211604961235 33.07630956708969 33.44387891700556 12.44359991094352 6 19.221474448399377 40.98789282785326 30.39186260501478 9.39877011873258 7 88.58724294100571 4.46240604682229 5.723499356031462 1.226851656140529 8 91.89135109390104 2.0748609901615134 5.2083245263238 0.8254633896136472 9 89.82135157300236 2.9568301529460506 6.095296070523714 1.1265222035278766 10 69.1272042183462 16.36638286959144 9.98573969016236 4.520673221900004 11 65.88065867976586 11.980562577677825 15.605386789767522 6.533391952788792 12 58.30698276080726 20.33108719362175 15.999799904743384 5.362130140827605 13 16.83864994884889 60.841217368268275 15.049417891897834 7.2707147909850045 14 7.659914156316669 58.42105114829314 24.542035504225957 9.376999191164243 15 5.482750943406861 21.408290143758578 65.08084130191556 8.028117610919 16 6.214014559043601 13.584072417573436 61.80244961685985 18.399463406523108 17 7.002136228232596 14.420315586856841 30.06057813437947 48.5169700505311 18 14.209722374877053 20.405982002699876 48.708540121917196 16.675755500505872 19 35.773438622893714 17.735978536260923 26.68756393888922 19.803018901956143 20 36.2367577804645 18.17541308397519 29.578376748367535 16.009452387192777 21 15.095637077932874 36.204770721836596 30.292096801012313 18.407495399218217 22 18.453785041329535 23.39388328528229 18.277785762799756 39.874545910588424 23 10.29306909486488 35.97945218991576 25.02325050517007 28.704228210049294 24 8.493057258244066 17.404412241320514 62.33854990122059 11.763980599214838 25 6.860801339229098 25.15923073237682 52.872564685723624 15.107403242670456 26 7.313833909664037 45.94447779365388 28.391825967855123 18.349862328826962 27 6.245437969061328 56.81740039624498 25.238493818183866 11.698667816509833 28 5.603794482443755 35.264604840050616 46.517285693752804 12.614314983752827 29 6.167865829084832 23.959504665601372 45.09090242960733 24.781727075706463 30 12.57584596610781 47.11137132888615 28.80427583835685 11.508506866649192 31 35.99953217165355 31.133060527406002 23.787803207724238 9.079604093216208 32 41.226034365655764 19.547333801161678 28.475668698619906 10.750963134562651 33 40.52401002167229 26.32020595720216 17.648049353072306 15.507734668053242 34 18.12778477641469 24.125781005605486 23.729676944799074 34.01675727318075 35 18.19084296467896 22.25503126840665 37.96377712206656 21.59034864484783 36 42.15408180232279 24.929332555498252 21.418365362665607 11.498220279513346 37 14.291169599048562 48.12932071887744 27.64689387342143 9.93261580865257 38 14.504933334460631 46.22242701455059 22.058599727757723 17.21403992323106 39 18.25721258852806 43.68762875847939 26.0559252151024 11.99923343789015 40 30.345079770369555 22.177952320964064 23.64956838607675 23.827399522589626 41 11.847611961750806 21.695398654570766 27.76230092635649 38.69468845732194 42 14.961700076938037 17.55765420721414 25.29471776704967 42.18592794879816 43 15.022644582914118 18.658107662521033 30.240875233561894 36.078372521002954 44 9.738861598902012 30.483244135940772 37.538222421378066 22.239671843779153 45 8.806375429429785 58.63756267067984 19.265932232527597 13.290129667362773 46 17.69250713720053 46.11512241038692 21.50263082988803 14.689739622524526 47 15.403248306940487 30.469857481448916 24.72726452874749 29.39962968286311 48 16.75889367050793 25.46627831277425 43.48281294475398 14.292015071963837 49 21.386096479732604 26.14681355349448 41.0517964890328 11.415293477740107 50 18.422502543464354 48.44968449769045 22.559331061829436 10.568481897015761 51 14.315124664981358 41.88515095918902 24.234424275218345 19.565300100611278 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1668.0 1 1864.5 2 2061.0 3 4727.0 4 7393.0 5 6205.5 6 5018.0 7 5567.0 8 6116.0 9 6793.0 10 7470.0 11 7558.0 12 7646.0 13 7289.5 14 6933.0 15 6536.5 16 6140.0 17 5648.0 18 5156.0 19 5228.0 20 5300.0 21 4907.0 22 4514.0 23 5124.5 24 5735.0 25 6137.0 26 8451.0 27 10363.0 28 15522.5 29 20682.0 30 25620.5 31 30559.0 32 37334.5 33 44110.0 34 50580.0 35 57050.0 36 57776.5 37 58503.0 38 74532.5 39 90562.0 40 133554.0 41 176546.0 42 214629.0 43 252712.0 44 240602.0 45 228492.0 46 187302.5 47 146113.0 48 122941.0 49 99769.0 50 81406.0 51 63043.0 52 46277.5 53 29512.0 54 20630.0 55 11748.0 56 9104.0 57 6460.0 58 5383.0 59 4306.0 60 3900.0 61 3494.0 62 3000.5 63 2507.0 64 2057.0 65 1607.0 66 1391.5 67 1176.0 68 985.5 69 795.0 70 685.5 71 576.0 72 506.0 73 436.0 74 353.5 75 198.5 76 126.0 77 84.0 78 42.0 79 46.5 80 51.0 81 30.5 82 10.0 83 6.0 84 2.0 85 3.5 86 5.0 87 4.0 88 3.0 89 3.5 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1419324.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.55002623444015 #Duplication Level Percentage of deduplicated Percentage of total 1 80.73242527320093 11.746589056950524 2 7.058860052904373 2.0541319791000037 3 2.3809872946315753 1.039302828022743 4 1.3083726899468973 0.7614742785260954 5 0.8758528121603039 0.63718406972203 6 0.6536837865739943 0.5706669746207875 7 0.5102285554649809 0.5196687207303182 8 0.417239255174145 0.4856673687057662 9 0.357135472505079 0.46766974447782705 >10 3.085126612316078 9.422337506788422 >50 0.6730011406238915 7.162222737071986 >100 1.8746847657230363 57.66521858650944 >500 0.06608531055944347 6.030571465333325 >1k 0.0063169782152409214 1.4372946834407379 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4058 0.2859107575155497 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2675 0.18847000403008757 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1474 0.10385225642629871 No Hit ATGTATGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 1433 0.10096355729910858 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02177092756833535 0.0 2 0.0 0.0 0.0 0.07799487643413343 0.0 3 0.0 0.0 0.0 0.10822053315522037 0.0 4 0.0 0.0 0.0 0.15387607058007896 0.0 5 0.0 0.0 0.0 0.25927836068438215 0.0 6 0.0 0.0 0.0 0.34537568588990253 0.0 7 0.0 0.0 0.0 0.4030792123574321 0.0 8 0.0 0.0 0.0 0.5352548114454487 0.0 9 0.0 0.0 0.0 0.5815444535567637 0.0 10 0.0 0.0 0.0 0.669614548897926 0.0 11 0.0 0.0 0.0 0.7680416874512092 0.0 12 0.0 0.0 0.0 0.8582959211568324 0.0 13 0.0 0.0 0.0 0.8978217799459461 0.0 14 0.0 0.0 0.0 0.9110675222852569 0.0 15 0.0 0.0 0.0 0.9331907302349569 0.0 16 0.0 0.0 0.0 0.9870191725074754 0.0 17 0.0 0.0 0.0 1.0590957385346826 0.0 18 0.0 0.0 0.0 1.1715436362662788 0.0 19 0.0 0.0 0.0 1.212760440885943 0.0 20 0.0 0.0 0.0 1.2607410288278083 0.0 21 0.0 0.0 0.0 1.3397927464060355 0.0 22 0.0 0.0 0.0 1.4092624376111444 0.0 23 0.0 0.0 0.0 1.5081123126220652 0.0 24 0.0 0.0 0.0 1.5740592000135276 0.0 25 0.0 0.0 0.0 1.622885260870668 0.0 26 0.0 0.0 0.0 1.6831252060840232 0.0 27 0.0 0.0 0.0 1.7402650839413694 0.0 28 0.0 0.0 0.0 1.8002936609259055 0.0 29 0.0 0.0 0.0 1.86941107174965 0.0 30 0.0 0.0 0.0 1.977842973133689 0.0 31 0.0 0.0 0.0 2.0787360743565246 0.0 32 0.0 0.0 0.0 2.157858248011025 0.0 33 0.0 0.0 0.0 2.228948428970411 0.0 34 0.0 0.0 0.0 2.318075365455668 0.0 35 0.0 0.0 0.0 2.4782220268240374 0.0 36 0.0 0.0 0.0 2.5753809560044076 0.0 37 0.0 0.0 0.0 2.6741603749390555 0.0 38 0.0 0.0 0.0 2.758073561780115 0.0 39 0.0 0.0 0.0 2.843748150527998 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACAGTC 35 1.2121927E-7 45.0 9 CGTATGG 145 0.0 45.0 2 CTACTCG 35 1.2121927E-7 45.0 1 CACGGTG 20 7.0338475E-4 45.0 4 CGACGGT 85 0.0 45.0 28 CAGCCTC 20 7.0338475E-4 45.0 20 CCTAGGC 20 7.0338475E-4 45.0 32 GCAACAT 35 1.2121927E-7 45.0 9 ATCAGCG 40 6.8175723E-9 45.0 1 TAGCGCC 20 7.0338475E-4 45.0 13 TAGCGAG 70 0.0 45.0 1 GCACGGT 20 7.0338475E-4 45.0 3 GCACGAT 20 7.0338475E-4 45.0 9 GCACGAG 20 7.0338475E-4 45.0 1 TTGTACC 20 7.0338475E-4 45.0 45 AGGGTGC 75 0.0 45.0 6 TGAGTCG 40 6.8175723E-9 45.0 1 CACGAAG 35 1.2121927E-7 45.0 1 TAACGCA 40 6.8175723E-9 45.0 40 ATGTCGT 20 7.0338475E-4 45.0 24 >>END_MODULE