##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545073_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1580028 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.03400192907974 31.0 31.0 33.0 30.0 33.0 2 31.36337330730848 31.0 31.0 33.0 30.0 34.0 3 31.507935302412363 31.0 31.0 34.0 30.0 34.0 4 35.35539053738288 37.0 35.0 37.0 33.0 37.0 5 35.25110061340685 37.0 35.0 37.0 33.0 37.0 6 35.30803378167982 37.0 35.0 37.0 32.0 37.0 7 35.64698726858005 36.0 35.0 37.0 35.0 37.0 8 35.710488041984064 37.0 35.0 37.0 35.0 37.0 9 37.58004731561719 39.0 37.0 39.0 35.0 39.0 10 37.18191449771776 39.0 37.0 39.0 33.0 39.0 11 36.687758697947125 39.0 35.0 39.0 32.0 39.0 12 35.121421898852425 35.0 35.0 39.0 31.0 39.0 13 34.58339535755063 35.0 33.0 39.0 30.0 39.0 14 35.18801059221735 35.0 33.0 40.0 27.0 41.0 15 35.66031804499667 35.0 34.0 40.0 31.0 41.0 16 35.891482935745444 35.0 34.0 40.0 32.0 41.0 17 35.79021511011197 35.0 34.0 40.0 31.0 41.0 18 35.93640619027005 36.0 35.0 39.0 31.0 41.0 19 35.80716924003878 36.0 35.0 39.0 31.0 41.0 20 35.51102828557469 35.0 34.0 39.0 31.0 41.0 21 35.34939697271188 35.0 34.0 39.0 31.0 41.0 22 35.181401848574836 35.0 34.0 39.0 30.0 41.0 23 35.15465548711795 35.0 34.0 39.0 30.0 41.0 24 35.206745070340524 35.0 34.0 39.0 31.0 41.0 25 35.14700562268517 35.0 34.0 39.0 31.0 41.0 26 34.933102451348965 35.0 34.0 39.0 30.0 41.0 27 34.891979762383954 35.0 34.0 39.0 30.0 41.0 28 35.02970263818109 35.0 34.0 39.0 30.0 41.0 29 35.05220477105469 36.0 34.0 39.0 30.0 41.0 30 35.02771976192827 36.0 34.0 39.0 30.0 41.0 31 34.74656018754098 35.0 34.0 39.0 29.0 41.0 32 34.56853929170875 35.0 34.0 39.0 29.0 41.0 33 34.332050444675666 35.0 33.0 39.0 27.0 41.0 34 34.15973767553486 35.0 34.0 39.0 27.0 41.0 35 33.949628740756495 35.0 33.0 39.0 25.0 41.0 36 33.66521226206118 35.0 33.0 39.0 23.0 41.0 37 33.6698640783581 35.0 33.0 39.0 23.0 41.0 38 33.772837569967116 35.0 33.0 39.0 25.0 41.0 39 33.784715840478775 35.0 33.0 39.0 24.0 41.0 40 33.41560592597093 35.0 33.0 39.0 23.0 41.0 41 33.55857807583157 35.0 33.0 39.0 23.0 41.0 42 33.5504655613698 35.0 33.0 39.0 23.0 41.0 43 33.52472551119347 35.0 33.0 39.0 23.0 41.0 44 33.4837578827717 35.0 33.0 38.0 23.0 41.0 45 33.53934107496829 35.0 33.0 38.0 23.0 41.0 46 33.59096927396223 35.0 33.0 38.0 23.0 41.0 47 33.55917869809902 35.0 33.0 38.0 23.0 41.0 48 33.59759067560828 35.0 33.0 38.0 23.0 41.0 49 33.65923262119406 35.0 33.0 38.0 24.0 41.0 50 33.45829757447336 35.0 33.0 38.0 24.0 41.0 51 33.182437906163685 35.0 33.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 3.0 13 7.0 14 4.0 15 23.0 16 97.0 17 289.0 18 666.0 19 1502.0 20 2706.0 21 4554.0 22 7329.0 23 10811.0 24 15980.0 25 22576.0 26 28404.0 27 33029.0 28 36067.0 29 41174.0 30 49816.0 31 62206.0 32 81039.0 33 110955.0 34 217729.0 35 332226.0 36 79918.0 37 95824.0 38 140093.0 39 204885.0 40 112.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.470852415273654 25.417967276529275 30.734898368889663 13.376281939307406 2 30.562622940859274 27.01926801297192 30.859896153739047 11.558212892429754 3 28.076274597665357 25.710177287997425 33.681301850346955 12.532246263990258 4 26.58497191189017 27.192113051161122 33.05631292610005 13.166602110848668 5 23.008516304774346 33.57750622140874 31.663236347710296 11.750741126106625 6 20.966527175467778 41.10629685043556 28.56405076365735 9.363125210439309 7 85.75468282840558 5.7040128402787795 7.138101350102656 1.4032029812129911 8 88.63893551253523 3.732528790629027 6.542099253937272 1.0864364428984803 9 84.71704298911159 6.079322644915154 7.675939920052049 1.5276944459212116 10 64.61132334363695 19.12466108195551 11.182080317563994 5.08193525684355 11 62.73547051064918 14.238671719741674 16.851789968279043 6.174067801330103 12 55.23161614857458 21.182536005691038 16.943560493864666 6.642287351869713 13 17.130645786024047 57.404425744353894 17.41956471657464 8.045363753047415 14 8.963385458991866 57.307085697215484 24.944811104613336 8.784717739179305 15 9.160723734009776 21.986255939768157 60.78734047751052 8.065679848711541 16 9.072370869376998 16.34477363692289 58.91300660494624 15.66984888875387 17 8.65389727270656 17.380957805811036 30.348829261253595 43.61631566022881 18 15.08751743639986 23.32401704273595 45.80602369071941 15.782441830144784 19 35.70037999326594 17.866961851308965 28.138678555063578 18.293979600361514 20 35.31912092697092 20.546091588250334 28.639112724584624 15.495674760194122 21 16.504707511512454 37.16016425025379 30.13756718235373 16.197561055880023 22 18.989536894282885 26.626933193588975 18.96744867812469 35.41608123400345 23 12.991225471953664 36.04644980975021 24.66855017759179 26.29377454070434 24 9.901027070406347 21.127220530269085 57.29050371259243 11.681248686732133 25 8.424344378707213 26.04960165262894 50.414866065664654 15.111187902999188 26 8.547696623097819 45.62963441154208 29.11904092838861 16.703628036971494 27 9.80064910242097 53.900057467336026 25.482839544615665 10.816453885627343 28 7.884100788087299 35.88626277509006 44.98667112228391 11.242965314538731 29 8.15884275468536 25.9973873880716 43.963081666907165 21.880688190335867 30 12.770786340495233 46.04469034725967 28.783793704921685 12.400729607323415 31 35.402347300174426 30.309209710207668 25.125883845096414 9.16255914452149 32 38.87772874911077 22.267769938254258 28.910943350371003 9.94355796226396 33 38.06983167386907 28.225765619343456 19.503261967509435 14.201140739278037 34 18.754604348783694 27.28337725660558 23.97698015478207 29.98503823982866 35 19.49921140638014 23.383383079287203 36.96016779449478 20.157237719837877 36 40.24827408121882 26.564908976296625 22.225428916449584 10.961388026034982 37 15.279476059917926 47.830101745032366 26.71167852721597 10.178743667833734 38 15.16492112798001 47.413400268855995 21.140574723992234 16.281103879171763 39 20.243058983764843 42.40000810112226 24.76051057323035 12.59642234188255 40 29.345745771593922 24.943545304260432 23.65293526443835 22.057773659707298 41 12.558258461242458 24.38709946912333 27.198505342943292 35.85613672669092 42 15.274539438541595 21.559238190715607 25.10252982858532 38.063692542157476 43 17.39703347029293 20.768239550185186 28.17120962413324 33.66351735538864 44 10.98809641348128 32.17999934178381 35.63430521484429 21.19759902989061 45 10.635760885250136 55.84578247980415 20.20951527441286 13.30894136053285 46 17.377793304928772 46.67993225436511 22.220808745161477 13.721465695544635 47 18.13372927568372 29.538084135217858 24.648487241998243 27.67969934710018 48 18.13391914573666 27.244137445665515 40.94193267461083 13.680010733986991 49 22.02714129116699 27.736217332857393 39.156837726926355 11.079803649049257 50 17.258744781738045 47.700736948965464 23.35926958256436 11.681248686732133 51 16.140283589911064 42.96512466867676 22.76225484611665 18.132336895295527 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1852.0 1 2943.0 2 4034.0 3 8390.0 4 12746.0 5 10308.5 6 7871.0 7 8299.5 8 8728.0 9 9017.5 10 9307.0 11 9505.0 12 9703.0 13 9490.0 14 9277.0 15 8340.0 16 7403.0 17 7196.0 18 6989.0 19 6992.0 20 6995.0 21 6443.0 22 5891.0 23 6770.5 24 7650.0 25 10580.0 26 18830.0 27 24150.0 28 28566.0 29 32982.0 30 38650.5 31 44319.0 32 48540.0 33 52761.0 34 55469.0 35 58177.0 36 56811.0 37 55445.0 38 74719.0 39 93993.0 40 136818.0 41 179643.0 42 220276.5 43 260910.0 44 246966.0 45 233022.0 46 202657.0 47 172292.0 48 137139.5 49 101987.0 50 82576.5 51 63166.0 52 49537.5 53 35909.0 54 26264.0 55 16619.0 56 13399.0 57 10179.0 58 9390.5 59 8602.0 60 7926.0 61 7250.0 62 6256.5 63 5263.0 64 4383.5 65 3504.0 66 2987.0 67 2470.0 68 2014.0 69 1558.0 70 1452.0 71 1346.0 72 1296.0 73 1246.0 74 947.0 75 483.0 76 318.0 77 231.0 78 144.0 79 122.5 80 101.0 81 72.0 82 43.0 83 24.5 84 6.0 85 6.0 86 6.0 87 7.0 88 8.0 89 6.5 90 5.0 91 2.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1580028.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.319338315082343 #Duplication Level Percentage of deduplicated Percentage of total 1 79.94053852957606 12.246361548244508 2 7.123249757017409 2.182469458611556 3 2.503643658127223 1.150624926577838 4 1.4985950810222697 0.9182994017399354 5 1.0188568254634427 0.7804106201952641 6 0.7659003231467734 0.7039851699549787 7 0.5991791212113459 0.6425319368419237 8 0.45502639240341214 0.5576562598015428 9 0.4181790979150603 0.5765604369531078 >10 3.3333389018887853 10.16982798634863 >50 0.6509240493270692 7.2242645690472616 >100 1.6254456047395456 54.14418564406819 >500 0.05759289805220413 5.654876161940541 >1k 0.008286747921180452 1.9650837478675183 >5k 0.0012430121881770676 1.0828621318072247 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6609 0.418283726617503 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 5393 0.3413230651608706 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 5058 0.3201209092497095 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3969 0.2511980800340247 No Hit GAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 3117 0.19727498500026583 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 1962 0.12417501461999408 No Hit TAGTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 1745 0.11044108079097331 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.008987182505626483 0.0 2 0.0 0.0 0.0 0.035442409881343874 0.0 3 0.0 0.0 0.0 0.05379651499846838 0.0 4 0.0 0.0 0.0 0.09411225623849703 0.0 5 0.0 0.0 0.0 0.1796803600948844 0.0 6 0.0 0.0 0.0 0.26594465414536955 0.0 7 0.0 0.0 0.0 0.32822203150830237 0.0 8 0.0 0.0 0.0 0.46018171829866306 0.0 9 0.0 0.0 0.0 0.5144845534382935 0.0 10 0.0 0.0 0.0 0.5998627872417451 0.0 11 0.0 0.0 0.0 0.6974559944507313 0.0 12 0.0 0.0 0.0 0.7800494674777916 0.0 13 0.0 0.0 0.0 0.8135931768297777 0.0 14 0.0 0.0 0.0 0.824732219935343 0.0 15 0.0 0.0 0.0 0.842959745017177 0.0 16 0.0 0.0 0.0 0.8909335783922817 0.0 17 0.0 0.0 0.0 0.946945244008334 0.0 18 0.0 0.0 0.0 1.0264375061707767 0.0 19 0.0 0.0 0.0 1.0663102172872885 0.0 20 0.0 0.0 0.0 1.1093474292860632 0.0 21 0.0 0.0 0.0 1.1746627274959685 0.0 22 0.0 0.0 0.0 1.2357375945236413 0.0 23 0.0 0.0 0.0 1.3153564367213746 0.0 24 0.0 0.0 0.0 1.3733933829020752 0.0 25 0.0 0.0 0.0 1.4216203763477608 0.0 26 0.0 0.0 0.0 1.4783915221755564 0.0 27 0.0 0.0 0.0 1.5267450956565327 0.0 28 0.0 0.0 0.0 1.5847820418372334 0.0 29 0.0 0.0 0.0 1.6430088580708697 0.0 30 0.0 0.0 0.0 1.7336401633388776 0.0 31 0.0 0.0 0.0 1.8188285270893934 0.0 32 0.0 0.0 0.0 1.8922449475578913 0.0 33 0.0 0.0 0.0 1.9651550478852273 0.0 34 0.0 0.0 0.0 2.0439511198535723 0.0 35 0.0 0.0 0.0 2.1703412850911503 0.0 36 0.0 0.0 0.0 2.2671750120883933 0.0 37 0.0 0.0 0.0 2.364388479191508 0.0 38 0.0 0.0 0.0 2.447235112289149 0.0 39 6.329001764525692E-5 0.0 0.0 2.5318538658808576 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTC 30 2.1660198E-6 45.000004 41 AGTTTCG 30 2.1660198E-6 45.000004 1 AGTCACG 30 2.1660198E-6 45.000004 1 CATGCGT 30 2.1660198E-6 45.000004 35 CCATGCG 30 2.1660198E-6 45.000004 34 CTACGTG 30 2.1660198E-6 45.000004 1 CGGATAT 30 2.1660198E-6 45.000004 22 GTACTCG 30 2.1660198E-6 45.000004 1 ACGCTCT 30 2.1660198E-6 45.000004 18 CACGTAG 30 2.1660198E-6 45.000004 1 TATACGT 30 2.1660198E-6 45.000004 25 TGATCGC 25 3.8914724E-5 45.0 28 TTTAGCG 45 3.8562575E-10 45.0 1 AACGTAG 25 3.8914724E-5 45.0 1 GATCGAC 20 7.034091E-4 45.0 9 GTACAAC 20 7.034091E-4 45.0 30 GGTCGAA 20 7.034091E-4 45.0 9 CACGGAT 25 3.8914724E-5 45.0 4 CGCGGCT 20 7.034091E-4 45.0 19 ACGTTGT 20 7.034091E-4 45.0 32 >>END_MODULE