SRR1545072_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545072_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2374616
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

$Per base sequence content$

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7434	0.31306114335960006	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGATCGA	30	2.1664837E-6	45.000004	11
CTCGTAG	65	0.0	45.000004	1
CATTGCG	30	2.1664837E-6	45.000004	1
ATGTGCG	125	0.0	45.000004	1
TAGCGAT	30	2.1664837E-6	45.000004	12
GAATCGG	60	0.0	45.000004	2
TGTATCG	65	0.0	45.000004	1
ATTCGCA	60	0.0	45.000004	18
CAATTCG	60	0.0	45.000004	16
ATAGACG	65	0.0	45.000004	1
TTATCCG	30	2.1664837E-6	45.000004	1
TCGTGCA	30	2.1664837E-6	45.000004	1
TGCGATG	30	2.1664837E-6	45.000004	1
TCCGTTG	30	2.1664837E-6	45.000004	33
GCTAGGT	30	2.1664837E-6	45.000004	16
TATAGCG	60	0.0	45.000004	1
ACGTAAC	30	2.1664837E-6	45.000004	26
GTAAGCG	120	0.0	45.000004	1
GCGTATT	65	0.0	45.000004	12
CCGTTGA	30	2.1664837E-6	45.000004	34