##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545072_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2374616 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.94501468869072 31.0 31.0 33.0 30.0 33.0 2 31.262584771600967 31.0 31.0 33.0 30.0 34.0 3 31.42178609088796 31.0 31.0 34.0 30.0 34.0 4 35.25922633385777 37.0 35.0 37.0 33.0 37.0 5 35.12574917376115 37.0 35.0 37.0 32.0 37.0 6 35.17734698999754 37.0 35.0 37.0 32.0 37.0 7 35.589703766840614 36.0 35.0 37.0 35.0 37.0 8 35.67668077701826 37.0 35.0 37.0 35.0 37.0 9 37.5575520420986 39.0 37.0 39.0 35.0 39.0 10 37.111996634403205 39.0 37.0 39.0 33.0 39.0 11 36.60550800634713 39.0 35.0 39.0 32.0 39.0 12 34.721857765634525 35.0 34.0 39.0 30.0 39.0 13 34.09033376343796 35.0 33.0 39.0 25.0 39.0 14 34.617157468828644 35.0 33.0 39.0 25.0 41.0 15 35.219592136160124 35.0 33.0 40.0 30.0 41.0 16 35.543167821660425 35.0 34.0 40.0 31.0 41.0 17 35.429606723781866 35.0 34.0 39.0 31.0 41.0 18 35.564839957281514 36.0 35.0 39.0 31.0 41.0 19 35.42391485612832 36.0 34.0 39.0 31.0 41.0 20 35.08250260252605 35.0 34.0 39.0 30.0 41.0 21 34.89325768882211 35.0 34.0 39.0 30.0 41.0 22 34.716340241959124 35.0 34.0 38.0 29.0 41.0 23 34.74907058657063 35.0 34.0 38.0 29.0 41.0 24 34.877561256219956 35.0 34.0 38.0 30.0 41.0 25 34.80122301879546 35.0 34.0 38.0 30.0 41.0 26 34.558147506796885 35.0 34.0 38.0 29.0 41.0 27 34.5198478406614 35.0 34.0 38.0 29.0 41.0 28 34.683798559430244 35.0 34.0 38.0 29.0 41.0 29 34.736582672735295 35.0 34.0 38.0 29.0 41.0 30 34.69650798276437 35.0 34.0 38.0 29.0 41.0 31 34.358581345362786 35.0 34.0 38.0 29.0 41.0 32 34.17183325640862 35.0 34.0 38.0 29.0 41.0 33 33.941254922901216 35.0 33.0 38.0 27.0 41.0 34 33.779962739238684 35.0 33.0 38.0 26.0 41.0 35 33.54838171729661 35.0 33.0 38.0 24.0 41.0 36 33.23556524507541 35.0 33.0 38.0 23.0 41.0 37 33.253482668355645 35.0 33.0 38.0 23.0 40.0 38 33.37110758118365 35.0 33.0 38.0 23.0 41.0 39 33.39418415440644 35.0 33.0 38.0 23.0 41.0 40 32.9800245597604 35.0 32.0 38.0 23.0 41.0 41 33.179388162128106 35.0 32.0 38.0 23.0 41.0 42 33.16876412860016 35.0 33.0 38.0 23.0 41.0 43 33.13817518285062 35.0 33.0 38.0 23.0 41.0 44 33.1250669581945 35.0 33.0 38.0 23.0 40.0 45 33.21018766823773 35.0 33.0 38.0 23.0 40.0 46 33.23789614826145 35.0 33.0 38.0 23.0 40.0 47 33.214362659057294 35.0 33.0 38.0 23.0 40.0 48 33.29044022275602 35.0 33.0 38.0 23.0 40.0 49 33.366396503687334 35.0 33.0 37.0 24.0 40.0 50 33.09130444669791 35.0 32.0 37.0 24.0 40.0 51 32.780121080629456 35.0 32.0 37.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 1.0 11 2.0 12 5.0 13 4.0 14 14.0 15 56.0 16 160.0 17 507.0 18 1332.0 19 2836.0 20 5098.0 21 8378.0 22 12776.0 23 18745.0 24 26342.0 25 36460.0 26 45980.0 27 53855.0 28 59405.0 29 67974.0 30 81210.0 31 100315.0 32 130548.0 33 178113.0 34 348120.0 35 527470.0 36 104920.0 37 122414.0 38 177258.0 39 264139.0 40 176.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.520724192880028 24.956456117536476 31.577316079736683 12.945503609846812 2 29.354725142928373 25.780926263446386 32.71897435206366 12.145374241561584 3 26.86139569513555 26.902539189494217 33.08846567192338 13.147599443446856 4 25.30181722013159 28.594728579273447 33.31317568819548 12.790278512399478 5 23.610680632152736 31.688281389496236 32.56278067695998 12.138257301391047 6 20.253969483908136 41.765826558904685 28.91166403325843 9.068539923928753 7 87.03920970801174 5.351433663379678 6.375978263432909 1.2333783651756747 8 90.23555808602318 2.8006633493583806 6.017941427161276 0.9458371374571721 9 87.68588268587426 3.610267933846988 7.023240810303645 1.6806085699751034 10 70.77476947851778 14.32930629626011 10.160042718485853 4.735881506736247 11 68.23722235510921 11.761017360280569 14.591875065273713 5.409885219336516 12 59.34142615058603 19.80686561532475 15.17740131457044 5.674306919518777 13 16.617213056763706 61.103353131622114 15.070099755076189 7.209334056537983 14 7.650289562607175 59.6403797498206 25.047839313809057 7.661491373763169 15 6.077403672846473 20.33545634325718 66.42808774134429 7.159052242552059 16 6.749722902566141 12.859342310504099 63.57625822448767 16.814676562442095 17 7.642498829284398 13.290612040009838 30.61695027743433 48.44993885327143 18 14.799992925171901 20.47417350847463 48.47870139845769 16.247132167895778 19 37.75755743244382 15.85561623437221 27.86079938819582 18.526026944988157 20 36.816015726332175 18.856606710306004 28.00153793286999 16.325839630491835 21 15.632759149268766 35.9274088947434 31.157206049314922 17.282625906672912 22 18.399522280655063 23.437431567882978 18.996039780747708 39.167006370714255 23 10.499634467214909 36.32439939762892 24.476589056925416 28.699377078230754 24 8.652388428276403 17.564566228813415 62.1995724782449 11.583472864665277 25 7.429159072456347 22.41688761467117 54.58701533216318 15.566937980709303 26 6.860646100253683 46.102906743658764 29.623358050312138 17.413089105775416 27 6.966010504435244 57.221293884990246 25.764376219144484 10.048319391430024 28 6.0804778541035684 35.76355082253299 47.47049628234628 10.685475041017158 29 6.776295620007613 25.418172875109068 45.330992463623595 22.47453904125972 30 13.509047357551704 46.718837908950334 28.69310237950052 11.079012353997445 31 37.636611561616704 28.920423344237552 24.808642744763784 8.634322349381964 32 42.3600278950365 18.970309304746536 29.929681262149334 8.739981538067628 33 41.76755315385729 25.076349186563217 18.373075899429633 14.78302176014985 34 19.726894790568245 24.84885977353812 23.18656995488955 32.23767548100408 35 18.87589403928888 22.277328208013422 37.8551311033026 20.9916466493951 36 44.55554076953916 23.58233920768663 21.768530153928044 10.093589868846163 37 15.241074767457139 48.556903516189564 26.74331344520546 9.45870827114784 38 15.415924090463468 48.10853628544573 19.324092821744653 17.15144680234615 39 20.418501349270787 42.26990806092438 24.989556206140275 12.322034383664558 40 31.102797252271525 21.5033083243775 22.938277178289038 24.45561724506194 41 11.75288973038167 21.6539432059752 27.072082391426655 39.521084672216475 42 15.686494153159922 16.557456026574403 26.109231976875417 41.64681784339026 43 16.449859682576047 17.77672684762505 29.910183372806383 35.863230096992524 44 9.76983225919475 31.539962671859367 37.19611928833967 21.494085780606213 45 9.971506972074643 58.98065202963342 19.33104131362713 11.716799684664805 46 18.255119985715584 45.92131948913003 21.645941912292347 14.177618612862036 47 17.07905615055234 29.441223338847205 23.963706131854583 29.51601437874587 48 18.716878855360193 25.453673351817724 42.87143689758681 12.958010895235272 49 23.3710208303153 25.34144467989772 40.846604250961 10.440930238825983 50 18.753221573509148 49.03626523193645 21.52187974813612 10.688633446418285 51 15.454540860501234 43.41464051450845 22.71390405859305 18.41691456639726 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3128.0 1 4164.5 2 5201.0 3 9969.5 4 14738.0 5 12197.0 6 9656.0 7 10222.0 8 10788.0 9 11890.0 10 12992.0 11 13136.5 12 13281.0 13 12611.5 14 11942.0 15 11685.5 16 11429.0 17 10340.0 18 9251.0 19 8826.0 20 8401.0 21 8091.0 22 7781.0 23 7536.0 24 7291.0 25 12217.0 26 16908.5 27 16674.0 28 24648.5 29 32623.0 30 39609.5 31 46596.0 32 56177.0 33 65758.0 34 71151.5 35 76545.0 36 76795.5 37 77046.0 38 104948.0 39 132850.0 40 216871.0 41 300892.0 42 371652.5 43 442413.0 44 416075.0 45 389737.0 46 320321.5 47 250906.0 48 208799.5 49 166693.0 50 134516.5 51 102340.0 52 77469.0 53 52598.0 54 38608.5 55 24619.0 56 19063.0 57 13507.0 58 11734.0 59 9961.0 60 9338.0 61 8715.0 62 7998.5 63 7282.0 64 6047.0 65 4812.0 66 3906.5 67 3001.0 68 2545.0 69 2089.0 70 1749.0 71 1409.0 72 1267.0 73 1125.0 74 886.0 75 533.0 76 419.0 77 297.5 78 176.0 79 129.5 80 83.0 81 59.5 82 36.0 83 29.5 84 23.0 85 16.5 86 10.0 87 7.0 88 4.0 89 3.5 90 3.0 91 2.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2374616.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.42223695635968 #Duplication Level Percentage of deduplicated Percentage of total 1 80.97248567716373 10.86831889704332 2 7.703150888183361 2.0678703306357917 3 2.6013523826171956 1.047479042594365 4 1.318714037390204 0.708003691501163 5 0.8275398462752812 0.5553717953768144 6 0.6210054826974021 0.5001169643977832 7 0.4744801984769147 0.44580099585404037 8 0.36079176465729124 0.3874106045706655 9 0.3181540204932746 0.3843304786511321 >10 2.8808438284018814 8.158650865679872 >50 0.4082558335207283 3.9105215565124745 >100 1.2610217001023616 46.79423292791129 >500 0.22193981921800926 18.548063484400014 >1k 0.02994926537743023 5.309263634426789 >5k 3.152554250255813E-4 0.3145647304444717 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7434 0.31306114335960006 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02097181186347603 0.0 2 0.0 0.0 0.0 0.07340134152216611 0.0 3 0.0 0.0 0.0 0.10367992130095982 0.0 4 0.0 0.0 0.0 0.15219302826225378 0.0 5 0.0 0.0 0.0 0.25882079460426444 0.0 6 0.0 0.0 0.0 0.347719378627955 0.0 7 0.0 0.0 0.0 0.4145512369157792 0.0 8 0.0 0.0 0.0 0.5600905577996611 0.0 9 0.0 0.0 0.0 0.611888406378126 0.0 10 0.0 0.0 0.0 0.6976706970727057 0.0 11 0.0 0.0 0.0 0.7945284627072335 0.0 12 0.0 0.0 0.0 0.8777419170088975 0.0 13 0.0 0.0 0.0 0.914463643805988 0.0 14 0.0 0.0 0.0 0.9271393774825066 0.0 15 0.0 0.0 0.0 0.9503431291627783 0.0 16 0.0 0.0 0.0 1.0010039517968379 0.0 17 0.0 0.0 0.0 1.0648458529715963 0.0 18 0.0 0.0 0.0 1.164651463647175 0.0 19 0.0 0.0 0.0 1.2052053889976315 0.0 20 0.0 0.0 0.0 1.2499705215495895 0.0 21 0.0 0.0 0.0 1.3223190612713802 0.0 22 0.0 0.0 0.0 1.3894035919912946 0.0 23 0.0 0.0 0.0 1.47800739151088 0.0 24 0.0 0.0 0.0 1.540164809805038 0.0 25 0.0 0.0 0.0 1.5873724425338664 0.0 26 0.0 0.0 0.0 1.6445185242582379 0.0 27 0.0 0.0 0.0 1.693115855363562 0.0 28 0.0 0.0 0.0 1.7465139626785973 0.0 29 0.0 0.0 0.0 1.8058498721477494 0.0 30 0.0 0.0 0.0 1.9076347502080335 0.0 31 0.0 0.0 0.0 2.006429671155252 0.0 32 0.0 0.0 0.0 2.0811785989818987 0.0 33 0.0 0.0 0.0 2.15630653545668 0.0 34 0.0 0.0 0.0 2.2445734384001454 0.0 35 0.0 0.0 0.0 2.3925552594608983 0.0 36 0.0 0.0 0.0 2.492739878784612 0.0 37 0.0 0.0 0.0 2.590818894507575 0.0 38 0.0 0.0 0.0 2.677274978354395 0.0 39 0.0 0.0 0.0 2.765162872649725 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGATCGA 30 2.1664837E-6 45.000004 11 CTCGTAG 65 0.0 45.000004 1 CATTGCG 30 2.1664837E-6 45.000004 1 ATGTGCG 125 0.0 45.000004 1 TAGCGAT 30 2.1664837E-6 45.000004 12 GAATCGG 60 0.0 45.000004 2 TGTATCG 65 0.0 45.000004 1 ATTCGCA 60 0.0 45.000004 18 CAATTCG 60 0.0 45.000004 16 ATAGACG 65 0.0 45.000004 1 TTATCCG 30 2.1664837E-6 45.000004 1 TCGTGCA 30 2.1664837E-6 45.000004 1 TGCGATG 30 2.1664837E-6 45.000004 1 TCCGTTG 30 2.1664837E-6 45.000004 33 GCTAGGT 30 2.1664837E-6 45.000004 16 TATAGCG 60 0.0 45.000004 1 ACGTAAC 30 2.1664837E-6 45.000004 26 GTAAGCG 120 0.0 45.000004 1 GCGTATT 65 0.0 45.000004 12 CCGTTGA 30 2.1664837E-6 45.000004 34 >>END_MODULE