##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545071_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2197948 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.883834831397284 31.0 31.0 33.0 30.0 33.0 2 31.19797920605947 31.0 31.0 33.0 30.0 34.0 3 31.32934810104698 31.0 31.0 34.0 28.0 34.0 4 35.19775490593954 37.0 35.0 37.0 33.0 37.0 5 35.070416133593696 37.0 35.0 37.0 32.0 37.0 6 35.137715723938875 37.0 35.0 37.0 32.0 37.0 7 35.535090912068895 36.0 35.0 37.0 35.0 37.0 8 35.60795341837022 37.0 35.0 37.0 35.0 37.0 9 37.44348046450598 39.0 37.0 39.0 35.0 39.0 10 36.997750629223255 39.0 37.0 39.0 33.0 39.0 11 36.53033374765918 39.0 35.0 39.0 32.0 39.0 12 34.96268519546413 35.0 34.0 39.0 30.0 39.0 13 34.42159323150502 35.0 33.0 39.0 27.0 39.0 14 35.00751610138183 35.0 33.0 40.0 27.0 41.0 15 35.54027301828797 35.0 33.0 40.0 30.0 41.0 16 35.76467778127599 35.0 34.0 40.0 31.0 41.0 17 35.61464556941293 35.0 34.0 40.0 31.0 41.0 18 35.717481487278135 36.0 35.0 39.0 31.0 41.0 19 35.60296922402168 36.0 34.0 39.0 31.0 41.0 20 35.28395803722381 35.0 34.0 39.0 30.0 41.0 21 35.11908198010144 35.0 34.0 39.0 30.0 41.0 22 34.93963687948941 35.0 34.0 39.0 29.0 41.0 23 34.90691317537995 35.0 34.0 39.0 29.0 41.0 24 35.02713439990391 35.0 34.0 39.0 30.0 41.0 25 34.92469658062884 35.0 34.0 39.0 30.0 41.0 26 34.67108685009836 35.0 34.0 39.0 29.0 41.0 27 34.66141646663161 35.0 34.0 39.0 29.0 41.0 28 34.76261813291306 35.0 34.0 39.0 29.0 41.0 29 34.76068223634044 35.0 34.0 39.0 29.0 41.0 30 34.71565432849185 35.0 34.0 39.0 29.0 41.0 31 34.41430779982056 35.0 34.0 39.0 29.0 41.0 32 34.2490691317538 35.0 34.0 39.0 27.0 41.0 33 33.99347573281988 35.0 33.0 39.0 26.0 41.0 34 33.797076636935905 35.0 33.0 39.0 24.0 41.0 35 33.56754345416725 35.0 33.0 38.0 23.0 41.0 36 33.283363846642416 35.0 33.0 38.0 23.0 41.0 37 33.34120688933496 35.0 33.0 38.0 23.0 41.0 38 33.41915641316355 35.0 33.0 38.0 23.0 41.0 39 33.39988389170262 35.0 33.0 38.0 23.0 41.0 40 33.081959172828476 35.0 32.0 38.0 23.0 41.0 41 33.18249385335777 35.0 32.0 38.0 23.0 41.0 42 33.14754898660023 35.0 32.0 38.0 23.0 41.0 43 33.12700027480177 35.0 32.0 38.0 23.0 41.0 44 33.12004378629522 35.0 32.0 38.0 23.0 41.0 45 33.19095447208032 35.0 33.0 38.0 23.0 41.0 46 33.22141515631853 35.0 33.0 38.0 23.0 41.0 47 33.15526800452058 35.0 33.0 38.0 23.0 41.0 48 33.1911037021804 35.0 33.0 38.0 23.0 41.0 49 33.26154258426496 35.0 33.0 38.0 24.0 40.0 50 33.025238085705396 35.0 32.0 38.0 23.0 40.0 51 32.72142653056396 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 2.0 11 4.0 12 3.0 13 13.0 14 21.0 15 61.0 16 175.0 17 575.0 18 1461.0 19 2933.0 20 5309.0 21 8373.0 22 12792.0 23 18479.0 24 25998.0 25 35452.0 26 44828.0 27 51019.0 28 56561.0 29 63556.0 30 75716.0 31 92159.0 32 118476.0 33 158395.0 34 295552.0 35 429576.0 36 114407.0 37 136630.0 38 193146.0 39 256158.0 40 115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.353107534846135 24.097112397563546 30.456089043052888 14.093691024537433 2 31.055602771312152 26.5487172580971 30.848273025567487 11.547406945023267 3 28.34143482921343 26.214769412197196 33.64701985670271 11.796775901886669 4 26.523147954364706 27.174573738778168 32.338845141013344 13.963433165843778 5 22.38829126075776 32.47820239605305 32.47042241217717 12.663083931012018 6 21.318247747444435 40.67107138112458 28.971932002030986 9.038748869400004 7 85.4642148039899 5.11609009858286 8.034721476577245 1.384973620849993 8 87.55066088915662 3.892630762875191 7.348263016231503 1.2084453317366926 9 83.88305819791914 5.32601317228615 8.724592210552752 2.0663364192419476 10 64.27517848465932 17.049447939623686 12.528503859053991 6.146869716662996 11 61.410597520960465 15.267285668268768 16.81313661651686 6.508980194253914 12 53.43165534398449 21.68226909826802 17.735587921097316 7.150487636650185 13 17.51897679107968 54.902026799542114 18.921330258950622 8.65766615042758 14 9.562237141188055 54.49965149311995 27.303830663873757 8.634280701818241 15 8.856715445497345 22.1916533057197 61.14102790420883 7.810603344574122 16 9.561873165334212 15.719707654594195 58.64397155892678 16.074447621144813 17 10.692564155293937 15.538857152216522 31.777639871370933 41.990938821118604 18 16.157206630912103 21.604696744417975 45.90731900845698 16.33077761621294 19 36.44508423311198 17.963436805602317 28.78666829242548 16.804810668860227 20 35.950441047740895 20.68975244182301 28.60609077193819 14.753715738497908 21 17.299681339139962 35.02525992425662 30.648268293881387 17.026790442722028 22 18.49597897675468 25.014650028117135 21.665480712009565 34.82389028311862 23 12.715405460001783 35.075625083031994 26.58725320162261 25.621716255343618 24 10.677004187542199 20.725831548335083 56.23886461372153 12.358299650401193 25 9.899324278827343 24.317317789137867 50.863032246440774 14.920325685594019 26 9.120825424441342 44.88331844065465 29.869905930440577 16.125950204463436 27 9.934584439668273 51.79553838398361 27.471760023440044 10.798117152908077 28 8.412209933992978 34.76997635976829 45.3964334006082 11.421380305630525 29 9.494082662556167 26.673788460873503 43.49575149184603 20.336377384724297 30 14.745025814987434 44.117194765299274 29.096775719898744 12.041003699814553 31 35.71453919746964 29.33517990416516 25.216338148127253 9.733942750237949 32 39.417675031438414 21.391588881993567 29.535002647924337 9.655733438643681 33 38.23630040383121 26.48452101687574 20.35898938464422 14.920189194648827 34 19.512427045589796 26.307810739835517 24.45890439628235 29.720857818292334 35 19.72721829633822 23.591322451668557 36.46355600769445 20.217903244298775 36 39.67186666836522 26.491345564135276 22.93334510188594 10.903442665613564 37 16.394564384598727 46.672805726068134 26.564914183593057 10.367715705740082 38 16.429415072604083 46.436448905979574 20.524234422288426 16.609901599127912 39 20.429054736508782 41.359941181502016 25.177938695546935 13.033065386442264 40 29.30951960646931 23.386586033882512 24.387747116856268 22.91614724279191 41 13.696593367995968 23.27607386525978 26.936260548475214 36.09107221826904 42 15.396770078273006 20.752037809811696 26.27646331942339 37.57472879249191 43 16.68410717632992 20.783567218150747 29.244549916558537 33.2877756889608 44 11.800597648352008 31.55602407336297 36.20445069674078 20.43892758154424 45 11.374927887283958 54.15951605770473 21.5207548131257 12.944801241885614 46 17.882406681140772 44.328346257509274 22.660636193394932 15.12861086795502 47 17.553099527377352 30.041293060618358 24.91564859587215 27.489958816132138 48 17.95461039114665 26.75108783283317 41.08891566133503 14.205386114685151 49 22.147521233441374 27.254102462842617 39.054973093085 11.543403210631006 50 18.277002003687077 46.698966490563016 22.812687106337364 12.211344399412543 51 15.868573778815515 41.83147190015414 24.480469965622483 17.819484355407862 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2755.0 1 4112.5 2 5470.0 3 13161.0 4 20852.0 5 16208.5 6 11565.0 7 12374.5 8 13184.0 9 13913.0 10 14642.0 11 14411.0 12 14180.0 13 14077.5 14 13975.0 15 12565.5 16 11156.0 17 10815.5 18 10475.0 19 10519.5 20 10564.0 21 10366.0 22 10168.0 23 11396.0 24 12624.0 25 16461.5 26 23051.5 27 25804.0 28 33381.5 29 40959.0 30 48486.0 31 56013.0 32 61950.0 33 67887.0 34 68833.5 35 69780.0 36 74972.0 37 80164.0 38 107338.0 39 134512.0 40 190869.0 41 247226.0 42 307486.0 43 367746.0 44 341299.0 45 314852.0 46 257041.0 47 199230.0 48 170736.5 49 142243.0 50 116037.5 51 89832.0 52 72612.5 53 55393.0 54 42659.0 55 29925.0 56 26223.5 57 22522.0 58 21929.5 59 21337.0 60 20161.5 61 18986.0 62 16630.0 63 14274.0 64 11247.0 65 8220.0 66 6876.0 67 5532.0 68 4937.5 69 4343.0 70 3866.0 71 3389.0 72 2968.0 73 2547.0 74 2028.5 75 1168.5 76 827.0 77 689.5 78 552.0 79 404.0 80 256.0 81 169.0 82 82.0 83 68.5 84 55.0 85 36.5 86 18.0 87 14.5 88 11.0 89 6.0 90 1.0 91 4.5 92 8.0 93 4.5 94 1.0 95 0.5 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2197948.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.390570716366533 #Duplication Level Percentage of deduplicated Percentage of total 1 80.83730873894662 12.441323166675124 2 6.723550989080236 2.0695857392507104 3 2.341498790888138 1.0811100817035189 4 1.3024727061343937 0.801831931595947 5 0.8919535938555472 0.6863837430975537 6 0.6682398491629562 0.617075559242195 7 0.5435994227165463 0.585641374968652 8 0.4534531864954736 0.5583122666656264 9 0.4018947191166072 0.5566850185588567 >10 3.7538973660553996 11.84264176841017 >50 0.5625137969846125 6.243195760843536 >100 1.4365452444374858 52.31513660318134 >500 0.07268764661024767 7.517008414187763 >1k 0.010087265243871105 2.20521744184175 >5k 0.0 0.0 >10k+ 2.966842718785619E-4 0.4788511297772943 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10487 0.4771268474049431 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3457 0.15728306584141208 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3355 0.15264237370492842 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.010646293724874292 0.0 2 0.0 0.0 0.0 0.040947283557208815 0.0 3 0.0 0.0 0.0 0.05714420905317141 0.0 4 0.0 0.0 0.0 0.08735420492204547 0.0 5 0.0 0.0 0.0 0.16306118252115154 0.0 6 0.0 0.0 0.0 0.23394548005685303 0.0 7 0.0 0.0 0.0 0.28840536718794074 0.0 8 0.0 0.0 0.0 0.40069191809815335 0.0 9 0.0 0.0 0.0 0.44627989379184585 0.0 10 0.0 0.0 0.0 0.5214864045919194 0.0 11 0.0 0.0 0.0 0.5943270723420209 0.0 12 0.0 0.0 0.0 0.6524722149932574 0.0 13 0.0 0.0 0.0 0.6788149674150616 0.0 14 0.0 0.0 0.0 0.6881418486697592 0.0 15 0.0 0.0 0.0 0.7035198284945776 0.0 16 0.0 0.0 0.0 0.7390529712258889 0.0 17 0.0 0.0 0.0 0.7815926491436558 0.0 18 0.0 0.0 0.0 0.8468808179265388 0.0 19 0.0 0.0 0.0 0.8772728017223338 0.0 20 0.0 0.0 0.0 0.9086202221344636 0.0 21 0.0 0.0 0.0 0.9589853809098304 0.0 22 0.0 0.0 0.0 1.0103969702649926 0.0 23 0.0 0.0 0.0 1.0727733322171407 0.0 24 0.0 0.0 0.0 1.1178608411118007 0.0 25 0.0 0.0 0.0 1.1546678993315584 0.0 26 0.0 0.0 0.0 1.199709911244488 0.0 27 0.0 0.0 0.0 1.2394742732767108 0.0 28 0.0 0.0 0.0 1.2836973395184963 0.0 29 0.0 0.0 0.0 1.3320151341160027 0.0 30 0.0 0.0 0.0 1.408131584550681 0.0 31 0.0 0.0 0.0 1.4805627794652103 0.0 32 0.0 0.0 0.0 1.5448500146500281 0.0 33 0.0 0.0 0.0 1.6027676723926134 0.0 34 0.0 0.0 0.0 1.6691932657187523 0.0 35 0.0 0.0 0.0 1.7700600742146766 0.0 36 0.0 0.0 0.0 1.8484513737358663 0.0 37 0.0 0.0 0.0 1.9296179891426002 0.0 38 0.0 0.0 0.0 2.0053249667417066 0.0 39 0.0 0.0 0.0 2.0832612964455937 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAT 30 2.166409E-6 45.000004 24 ACCGGGT 75 0.0 45.000004 4 GTCGATG 30 2.166409E-6 45.000004 1 CGACACT 30 2.166409E-6 45.000004 34 ACTCGTT 35 1.2126111E-7 45.000004 38 TCGGTAT 30 2.166409E-6 45.000004 1 TATCCGT 35 1.2126111E-7 45.000004 15 ACGTTAT 45 3.8562575E-10 45.0 17 CGGCCTT 20 7.0346944E-4 45.0 44 CGCATGA 135 0.0 45.0 38 TACGGGT 95 0.0 45.0 4 ATGTACG 40 6.8193913E-9 45.0 1 ACGATTT 20 7.0346944E-4 45.0 31 TACGCTA 20 7.0346944E-4 45.0 16 GGACGTC 45 3.8562575E-10 45.0 8 ACCGTAA 20 7.0346944E-4 45.0 18 GCTACCT 45 3.8562575E-10 45.0 1 CGGTAGT 85 0.0 45.0 12 CTTAACG 25 3.8919727E-5 44.999996 1 CAAGTCG 25 3.8919727E-5 44.999996 1 >>END_MODULE