SRR1545070_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545070_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2153206
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7501	0.34836425311837327	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	3169	0.1471758856328656	No Hit
AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	3146	0.14610771101325187	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2521	0.11708122678461791	No Hit
AGTGTAGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA	2294	0.10653880771277806	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAC	40	6.8193913E-9	45.000004	25
AACGTAG	65	0.0	45.000004	1
CGGGTCA	20	7.034659E-4	45.000004	6
CTCACGA	40	6.8193913E-9	45.000004	24
CGAACAT	65	0.0	45.000004	43
GTCGACA	60	0.0	45.000004	8
CAAGTCG	30	2.166389E-6	45.000004	1
GGTCGAC	60	0.0	45.000004	7
ACGCATG	40	6.8193913E-9	45.000004	1
ACACCGA	20	7.034659E-4	45.000004	19
CTATACG	20	7.034659E-4	45.000004	1
TAAGTCG	60	0.0	45.000004	1
ATGTCGT	65	0.0	45.000004	11
TCGATGC	20	7.034659E-4	45.000004	36
TAGTTCG	60	0.0	45.000004	2
AGACGCG	60	0.0	45.000004	1
TACGCCT	20	7.034659E-4	45.000004	34
CTTGCCC	20	7.034659E-4	45.000004	41
ACGTGCA	40	6.8193913E-9	45.000004	33
CGAATCC	40	6.8193913E-9	45.000004	28