##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545067_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3167247 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.05000620412617 31.0 31.0 33.0 30.0 33.0 2 31.37628830337514 31.0 31.0 33.0 30.0 34.0 3 31.54994605725414 31.0 31.0 34.0 30.0 34.0 4 35.359579470751726 37.0 35.0 37.0 33.0 37.0 5 35.21544325403102 37.0 35.0 37.0 33.0 37.0 6 35.28536454529754 37.0 35.0 37.0 32.0 37.0 7 35.682325375949524 37.0 35.0 37.0 35.0 37.0 8 35.772908143886475 37.0 35.0 37.0 35.0 37.0 9 37.688424679224575 39.0 37.0 39.0 35.0 39.0 10 37.29030100904666 39.0 37.0 39.0 34.0 39.0 11 36.73183114547113 39.0 35.0 39.0 33.0 39.0 12 34.56606384030042 35.0 34.0 38.0 30.0 39.0 13 33.82607671583555 35.0 33.0 37.0 25.0 39.0 14 34.27843676227336 35.0 33.0 38.0 25.0 41.0 15 34.95034741527895 35.0 33.0 39.0 30.0 41.0 16 35.30276230429771 35.0 34.0 38.0 32.0 41.0 17 35.2250503355122 35.0 34.0 38.0 31.0 41.0 18 35.40333734628212 36.0 35.0 38.0 31.0 41.0 19 35.24432669760205 36.0 34.0 37.0 31.0 41.0 20 34.879860964427465 35.0 34.0 37.0 31.0 41.0 21 34.68248860919278 35.0 34.0 37.0 30.0 41.0 22 34.502884681870405 35.0 34.0 37.0 29.0 41.0 23 34.57032558559531 35.0 34.0 37.0 30.0 41.0 24 34.705112357830004 35.0 34.0 37.0 31.0 41.0 25 34.660722387612964 35.0 34.0 37.0 30.0 40.0 26 34.42935962998781 35.0 34.0 36.0 30.0 40.0 27 34.37436265627531 35.0 34.0 37.0 29.0 40.0 28 34.59998478173632 35.0 34.0 37.0 30.0 40.0 29 34.65338289056711 35.0 34.0 36.0 30.0 40.0 30 34.61474744470513 35.0 34.0 36.0 30.0 40.0 31 34.245180751611734 35.0 34.0 36.0 29.0 40.0 32 34.046226265270754 35.0 34.0 36.0 29.0 40.0 33 33.80876925607633 35.0 33.0 36.0 27.0 40.0 34 33.6871825910641 35.0 34.0 36.0 27.0 40.0 35 33.43898123512312 35.0 33.0 36.0 26.0 40.0 36 33.09254914441469 35.0 33.0 36.0 23.0 40.0 37 33.107507560982775 35.0 33.0 36.0 23.0 40.0 38 33.2476358806244 35.0 33.0 36.0 24.0 40.0 39 33.27685147385095 35.0 33.0 36.0 24.0 40.0 40 32.83170242169304 35.0 32.0 36.0 23.0 40.0 41 33.10204540410015 35.0 33.0 36.0 23.0 40.0 42 33.09776092612922 35.0 33.0 36.0 23.0 40.0 43 33.07398696723053 35.0 33.0 36.0 23.0 40.0 44 33.037380096973806 35.0 33.0 35.0 23.0 40.0 45 33.121146219413895 35.0 33.0 35.0 23.0 40.0 46 33.19403223051439 35.0 33.0 35.0 23.0 40.0 47 33.17278033573005 35.0 33.0 35.0 24.0 40.0 48 33.24211184034589 35.0 33.0 36.0 23.0 40.0 49 33.35824297883935 35.0 33.0 36.0 24.0 40.0 50 33.008853745855625 35.0 33.0 36.0 24.0 40.0 51 32.696268399654336 35.0 32.0 35.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 4.0 11 3.0 12 7.0 13 10.0 14 18.0 15 73.0 16 189.0 17 551.0 18 1413.0 19 3119.0 20 5815.0 21 9637.0 22 15301.0 23 22709.0 24 32875.0 25 46257.0 26 58980.0 27 68316.0 28 75883.0 29 87324.0 30 107095.0 31 135205.0 32 179127.0 33 248934.0 34 515199.0 35 804606.0 36 115147.0 37 136397.0 38 193074.0 39 303719.0 40 260.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.818482739110653 25.30516249600994 32.18107081639038 12.695283948489019 2 28.571974336071676 26.447637332989814 32.93601667315495 12.044371657783557 3 27.257804648642814 25.40136591809859 35.87317313742818 11.467656295830416 4 25.834612835689796 28.616460920161895 32.976335599970575 12.572590644177737 5 22.074280913361036 33.97688907748591 31.68691927089993 12.261910738253126 6 20.35720611622649 41.708619504572894 28.92995083743074 9.004223541769871 7 87.9954736716145 4.968226349255363 6.010330106871993 1.0259698722581472 8 91.09538978172526 2.651324636190357 5.410471617780362 0.8428139643040156 9 89.18268767797396 3.8866877133359035 5.978820092023136 0.9518045166669983 10 77.19243241843785 10.543446722027047 8.45778684137991 3.806334018155199 11 76.07988893824826 9.248662955557304 10.82555291709172 3.8458951891027127 12 64.65889777462888 19.5698346229391 11.85101761877113 3.920249983660889 13 15.683873092310135 67.15617695746495 12.665289445376379 4.494660504848532 14 6.161249817270329 65.89457658338614 23.285995692789353 4.658177906554178 15 5.394779756678276 19.05860199725503 70.38206998064881 5.164548265417885 16 5.459252151789866 10.962738302380584 68.4547810764364 15.123228469393135 17 6.020970262186688 11.092914445889443 29.96179331766673 52.92432197425714 18 14.451035868058284 18.483275854393423 51.01730303951665 16.04838523803164 19 40.67680859749808 13.055975741708808 28.36561215465671 17.9016035061364 20 39.278370142903285 17.742064322738326 26.459666707396046 16.519898826962343 21 14.409769746407527 37.83392959248205 31.55709043216396 16.199210228946466 22 18.23703677041923 21.970531505752472 17.75583022100897 42.03660150281932 23 9.909899669965746 37.29724899889399 22.850949105011388 29.941902226128875 24 7.256712217266288 17.087205386886467 65.40490842678199 10.251173969065249 25 5.836772439913906 21.043764505894234 58.16420380222951 14.955259251962353 26 5.718278366038392 49.46611363117559 28.456195554056883 16.35941244872913 27 6.610725339703534 60.808803355090404 23.80837364436686 8.772097660839208 28 4.731964384211272 37.191952506388034 49.62966260604241 8.44642050335828 29 5.719509719324069 24.43585864948329 47.190414893439005 22.65421673775364 30 12.245650560249958 50.065309083882624 27.156991545023168 10.532048810844245 31 41.04173119431481 28.958145670356622 22.970611385850233 7.029511749478333 32 45.08413773854707 18.49931502026839 29.622129249786962 6.794417991397577 33 45.10289219628277 25.82084693741915 16.19387436470853 12.882386501589552 34 19.573844414407844 25.769098526259555 20.478320762479214 34.17873629685339 35 18.133508374938867 22.070934158276888 38.70828514479609 21.08727232198815 36 48.993715993732096 22.54582607545291 18.896757973091457 9.563699957723538 37 14.996872678385992 51.95666773068219 24.493069217525505 8.553390373406305 38 15.358069642184521 50.2770387026967 17.252711897745897 17.112179757372886 39 20.727780308892864 44.072628374105335 23.265631003833928 11.933960313167871 40 33.22623717064062 20.406744406104103 21.683910348640318 24.683108074614957 41 11.183024247872048 20.46667026600704 24.94885937219295 43.40144611392796 42 15.113756521041774 16.216543894429453 24.97222351145964 43.69747607306913 43 16.289130591962042 16.290298798925377 29.16782303369456 38.25274757541802 44 8.445473308523145 30.908861860158048 39.6288322319036 21.016832599415203 45 8.567093125354607 62.49891467258474 17.664899516835913 11.26909268522474 46 18.960851490268993 47.766467219007545 19.651167086116114 13.621514204607346 47 17.639198963642556 28.33116583581893 21.690161834552217 32.3394733659863 48 18.513838674407143 25.729411062667356 43.76677916183992 11.98997110108558 49 25.271063481945045 23.74519574886329 41.69318022876018 9.290560540431485 50 19.808338282426348 51.409094396490076 18.667757835116745 10.114809485966834 51 15.85023207852119 45.53351854149676 20.615979745185644 18.0002696347964 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5870.0 1 5760.0 2 5650.0 3 11654.5 4 17659.0 5 14508.5 6 11358.0 7 12698.0 8 14038.0 9 15792.0 10 17546.0 11 17776.0 12 18006.0 13 17177.0 14 16348.0 15 15230.5 16 14113.0 17 13014.0 18 11915.0 19 10639.0 20 9363.0 21 10232.5 22 11102.0 23 10959.5 24 10817.0 25 12214.0 26 15652.5 27 17694.0 28 30005.5 29 42317.0 30 43971.0 31 45625.0 32 57303.5 33 68982.0 34 73428.0 35 77874.0 36 81328.0 37 84782.0 38 130191.5 39 175601.0 40 289764.0 41 403927.0 42 522001.0 43 640075.0 44 605525.0 45 570975.0 46 475757.0 47 380539.0 48 298588.5 49 216638.0 50 173881.5 51 131125.0 52 98268.5 53 65412.0 54 45345.0 55 25278.0 56 18371.0 57 11464.0 58 9970.0 59 8476.0 60 7732.5 61 6989.0 62 6175.5 63 5362.0 64 4631.0 65 3900.0 66 3008.0 67 2116.0 68 1894.0 69 1672.0 70 1295.0 71 918.0 72 881.5 73 845.0 74 688.5 75 453.5 76 375.0 77 282.0 78 189.0 79 137.5 80 86.0 81 73.0 82 60.0 83 36.5 84 13.0 85 9.0 86 5.0 87 3.0 88 1.0 89 1.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3167247.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.780290369165455 #Duplication Level Percentage of deduplicated Percentage of total 1 80.13302908619771 8.638573217099925 2 8.862191086433414 1.9107398643756415 3 2.9714735724745167 0.9610004380673011 4 1.4426299411690429 0.6220787864421744 5 0.8349367556930132 0.450043033312982 6 0.5662855388477755 0.3662833524383007 7 0.3858845632110099 0.2911963348275288 8 0.3014276799602864 0.259958233222061 9 0.2567941839728532 0.24914842815062263 >10 2.3984844500851343 5.7133308528478315 >50 0.5233908094072607 3.937377389632651 >100 0.713046080077668 20.250094486629227 >500 0.5095706625872222 40.00363471359037 >1k 0.10056155026245239 16.028606670551067 >5k 0.0 0.0 >10k+ 2.940396206504456E-4 0.3179341988123015 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10030 0.316678806547137 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 4792 0.15129858833239088 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 4442 0.14024798192247084 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4201 0.13263885008021162 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3985 0.1258190472672324 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3529 0.11142168577316515 No Hit TTTGTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 3478 0.10981145455343394 No Hit TTGTTAGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 3301 0.10422300502613152 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.018217713995782456 0.0 2 0.0 0.0 0.0 0.06270429808600339 0.0 3 0.0 0.0 0.0 0.08543697412926747 0.0 4 0.0 0.0 0.0 0.13737482425589162 0.0 5 0.0 0.0 0.0 0.23430442905147594 0.0 6 0.0 0.0 0.0 0.32798199824642665 0.0 7 0.0 0.0 0.0 0.3969693554054988 0.0 8 0.0 0.0 0.0 0.5390485806758993 0.0 9 0.0 0.0 0.0 0.5886184437146834 0.0 10 0.0 0.0 0.0 0.6666672981298901 0.0 11 0.0 0.0 0.0 0.7670383774931352 0.0 12 0.0 0.0 0.0 0.8608738124939419 0.0 13 0.0 0.0 0.0 0.8961726066833436 0.0 14 0.0 0.0 0.0 0.9098122123093021 0.0 15 0.0 0.0 0.0 0.9290718406237342 0.0 16 0.0 0.0 0.0 0.9799993495928798 0.0 17 0.0 0.0 0.0 1.0370836249904096 0.0 18 0.0 0.0 0.0 1.1311084989582436 0.0 19 0.0 0.0 0.0 1.1667545979205285 0.0 20 0.0 0.0 0.0 1.2033794648791205 0.0 21 0.0 0.0 0.0 1.2696199570162985 0.0 22 0.0 0.0 0.0 1.3280303051830185 0.0 23 0.0 0.0 0.0 1.413151547700574 0.0 24 0.0 0.0 0.0 1.4662260316293614 0.0 25 0.0 0.0 0.0 1.5099864330126447 0.0 26 0.0 0.0 0.0 1.5645764286776498 0.0 27 0.0 0.0 0.0 1.6044217580757043 0.0 28 0.0 0.0 0.0 1.6523182435724149 0.0 29 0.0 0.0 0.0 1.704729691116607 0.0 30 0.0 0.0 0.0 1.8009015400440824 0.0 31 0.0 0.0 0.0 1.8930951706639867 0.0 32 0.0 0.0 0.0 1.9629350031746813 0.0 33 0.0 0.0 0.0 2.0253235696489726 0.0 34 0.0 0.0 0.0 2.1000888153023745 0.0 35 0.0 0.0 0.0 2.244346588693588 0.0 36 0.0 0.0 0.0 2.3316779524931275 0.0 37 0.0 0.0 0.0 2.4199249379666314 0.0 38 0.0 0.0 0.0 2.495763671099854 0.0 39 0.0 0.0 0.0 2.5709393678484815 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAG 60 0.0 45.000004 1 GTACCTA 30 2.1667147E-6 45.000004 17 CGTATAA 35 1.2128294E-7 45.000004 28 GATCGGT 95 0.0 45.000004 9 TAGACGC 65 0.0 45.000004 44 ATGTGCG 120 0.0 45.000004 1 ATTACGA 35 1.2128294E-7 45.000004 12 TCGATTG 70 0.0 45.000004 1 TGCGGGT 95 0.0 45.000004 4 TAGCCGT 30 2.1667147E-6 45.000004 44 ACGGGCC 70 0.0 45.000004 5 TACGCGT 35 1.2128294E-7 45.000004 24 TGTCTGC 35 1.2128294E-7 45.000004 39 GTATGCG 155 0.0 45.000004 1 CTACGCT 35 1.2128294E-7 45.000004 41 CTACGAT 35 1.2128294E-7 45.000004 14 TGACACG 130 0.0 45.000004 1 ACTACGA 35 1.2128294E-7 45.000004 13 ATCCATG 30 2.1667147E-6 45.000004 1 TATTACG 95 0.0 45.000004 1 >>END_MODULE