##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545066_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3299742 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.918416045860557 31.0 31.0 33.0 30.0 33.0 2 31.23323187085536 31.0 31.0 33.0 30.0 34.0 3 31.368333342424954 31.0 31.0 34.0 30.0 34.0 4 35.23608967004087 37.0 35.0 37.0 33.0 37.0 5 35.11423196116545 37.0 35.0 37.0 32.0 37.0 6 35.18413318374588 37.0 35.0 37.0 32.0 37.0 7 35.55793604469683 36.0 35.0 37.0 35.0 37.0 8 35.627112968226 37.0 35.0 37.0 35.0 37.0 9 37.4858716226905 39.0 37.0 39.0 35.0 39.0 10 37.03826450674023 39.0 37.0 39.0 33.0 39.0 11 36.559005219195924 39.0 35.0 39.0 32.0 39.0 12 35.044077385444076 35.0 35.0 39.0 31.0 39.0 13 34.49873111291731 35.0 33.0 39.0 27.0 39.0 14 35.11032832263856 35.0 33.0 40.0 27.0 41.0 15 35.6113853749778 35.0 34.0 40.0 30.0 41.0 16 35.83478738640778 35.0 34.0 40.0 31.0 41.0 17 35.68480111475382 35.0 34.0 40.0 31.0 41.0 18 35.79043058517908 36.0 35.0 39.0 31.0 41.0 19 35.64402368427592 36.0 34.0 39.0 31.0 41.0 20 35.33744668522569 35.0 34.0 39.0 30.0 41.0 21 35.18182057869979 35.0 34.0 39.0 30.0 41.0 22 35.014192624756724 35.0 34.0 39.0 30.0 41.0 23 34.99084443571649 35.0 34.0 39.0 29.0 41.0 24 35.091038026609354 35.0 34.0 39.0 30.0 41.0 25 34.98985647968841 35.0 34.0 39.0 30.0 41.0 26 34.73503019326966 35.0 34.0 39.0 29.0 41.0 27 34.723914778791794 35.0 34.0 39.0 29.0 41.0 28 34.83089496087876 35.0 34.0 39.0 29.0 41.0 29 34.82900147950961 36.0 34.0 39.0 29.0 41.0 30 34.784618918691216 35.0 34.0 39.0 29.0 41.0 31 34.493784059481015 35.0 34.0 39.0 29.0 41.0 32 34.324120188790516 35.0 34.0 39.0 27.0 41.0 33 34.07769880190633 35.0 33.0 39.0 27.0 41.0 34 33.881940163806746 35.0 33.0 39.0 25.0 41.0 35 33.66406373589208 35.0 33.0 39.0 24.0 41.0 36 33.36210982555606 35.0 33.0 38.0 23.0 41.0 37 33.4449705461821 35.0 33.0 39.0 23.0 41.0 38 33.48497124926737 35.0 33.0 38.0 23.0 41.0 39 33.47941414813643 35.0 33.0 38.0 23.0 41.0 40 33.157390183838615 35.0 32.0 38.0 23.0 41.0 41 33.25320100783637 35.0 32.0 38.0 23.0 41.0 42 33.20807263113298 35.0 32.0 38.0 23.0 41.0 43 33.171913743559344 35.0 33.0 38.0 23.0 41.0 44 33.16324639926394 35.0 33.0 38.0 23.0 41.0 45 33.23679911944631 35.0 33.0 38.0 23.0 41.0 46 33.24300233169745 35.0 33.0 38.0 23.0 41.0 47 33.17058970064932 35.0 33.0 38.0 23.0 41.0 48 33.222918943359815 35.0 33.0 38.0 23.0 41.0 49 33.27442418225425 35.0 33.0 38.0 24.0 40.0 50 33.04530475412926 35.0 32.0 38.0 23.0 40.0 51 32.746353805843 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 4.0 10 1.0 11 5.0 12 8.0 13 9.0 14 29.0 15 91.0 16 256.0 17 768.0 18 1887.0 19 3994.0 20 7161.0 21 11778.0 22 18137.0 23 26834.0 24 37641.0 25 51460.0 26 66345.0 27 76428.0 28 84082.0 29 95074.0 30 112321.0 31 137911.0 32 175753.0 33 235220.0 34 439745.0 35 649917.0 36 174309.0 37 206533.0 38 288574.0 39 397286.0 40 179.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.50694327011021 24.71444737194605 30.906961817014782 14.871647540928956 2 30.743403575188605 26.2489309770279 31.309326607959047 11.698338839824448 3 27.113968304188628 26.375728769097705 34.69968258124423 11.810620345469433 4 25.46611219907496 28.401099237455536 33.07370697466651 13.059081588803004 5 22.783417612649718 32.44962787999789 31.96189277828388 12.805061729068514 6 20.920241643134524 40.55277655040909 29.72120244552453 8.805779360931854 7 85.17571979869942 5.269411972208736 8.132241854060105 1.4226263750317447 8 87.72207039217005 3.6252834312500792 7.381516494319859 1.271129682260007 9 84.21282633611962 5.333416976236324 8.612218773467744 1.8415379141763204 10 62.84754989935577 18.697492106958666 12.507614231658112 5.947343762027455 11 60.1694314282753 14.729121246448965 18.11135537263216 6.990091952643571 12 53.437299037318674 21.019097856741528 18.06771559715881 7.47588750878099 13 17.01730014043522 55.005209498197125 18.24163828565991 9.735852075707738 14 9.265330440985991 54.117958313104474 26.379819998048333 10.236891247861196 15 8.65076724180254 22.343110461363345 59.864710634952665 9.141411661881444 16 8.997339792020103 15.686408210096426 58.336015361200964 16.980236636682505 17 9.5596867876337 16.827224673929052 31.15961793376573 42.453470604671516 18 16.070377623462683 21.493953163610975 46.42378101075781 16.011888202168535 19 36.09827677436599 18.55451123148416 27.503241162490887 17.843970831658957 20 35.16053679348264 20.08338833763367 29.341021207112554 15.415053661771132 21 15.883666056315917 36.41808965670649 30.58457297570537 17.113671311272213 22 18.777831721389127 24.724690597022434 21.307999231455067 35.18947845013338 23 12.404272818905236 35.47941020843447 26.405306839140756 25.71101013351953 24 10.70259432404109 19.76257537710524 57.275053625404645 12.259776673449014 25 9.624510037451413 25.043473095775365 50.55464942410649 14.77736744266673 26 8.67501156150996 45.00891281803244 28.856316645361975 17.459758975095628 27 9.165140789795082 51.59012431881038 27.222825299674945 12.021909591719595 28 8.132726740454252 34.33710878001977 45.82464325998821 11.70552121953777 29 9.30054531536102 25.686462759815765 43.269958681618135 21.743033243205076 30 14.095889921090802 44.59775946119424 28.62290445737879 12.683446160336173 31 34.83375366922626 29.350749240395157 25.177180518961784 10.638316571416796 32 39.09017735325974 21.4400398576616 28.544625610123457 10.925157178955203 33 37.3124626107132 26.470311921356277 20.575972303289166 15.641253164641356 34 18.07850431942861 26.050006333828524 24.993257048581373 30.878232298161496 35 19.30329704564781 23.162568467474124 36.94043352480285 20.593700962075218 36 38.98298715475331 26.450704327792902 22.604979419603108 11.96132909785068 37 15.40632570667646 46.330258547486444 27.624977952821766 10.638437793015333 38 15.350230411953419 45.33560502608992 22.44854294669098 16.865621615265677 39 19.387061170236947 41.149489869207954 26.116890350821365 13.34655860973373 40 29.37438745210989 23.840863922088452 24.22337867627227 22.561369949529386 41 13.253339200458703 22.61037378073801 27.461540932594126 36.67474608620916 42 14.73000010303836 20.10117760721899 26.143316659302457 39.0255056304402 43 15.418660004327611 21.65566277605946 29.304109230358012 33.62156798925492 44 10.783994627458753 31.618229546431202 36.51385471955081 21.083921106559238 45 10.723414133589838 54.26209079376508 20.90490711091958 14.109587961725492 46 17.45397064376548 44.827716833619114 22.052451373471015 15.665861149144389 47 16.581750936891428 29.068060472606643 25.515934276073704 28.83425431442822 48 17.22343746874756 26.197502713848536 42.09450314600354 14.48455667140037 49 21.199445289965094 27.199278004159112 39.39198882821748 12.209287877658314 50 17.60567947433466 46.518424773815646 23.402284178581233 12.473611573268457 51 15.067450727966007 41.375446928881104 24.323507716663908 19.23359462648898 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 5777.0 1 7570.5 2 9364.0 3 21218.5 4 33073.0 5 26095.0 6 19117.0 7 19310.5 8 19504.0 9 20682.5 10 21861.0 11 21675.0 12 21489.0 13 20656.5 14 19824.0 15 19646.0 16 19468.0 17 17315.0 18 15162.0 19 14501.0 20 13840.0 21 14890.5 22 15941.0 23 18200.0 24 20459.0 25 22052.5 26 31810.5 27 39975.0 28 52119.0 29 64263.0 30 69225.0 31 74187.0 32 89171.0 33 104155.0 34 109812.5 35 115470.0 36 120010.5 37 124551.0 38 162791.0 39 201031.0 40 288901.5 41 376772.0 42 455559.5 43 534347.0 44 496291.5 45 458236.0 46 393536.0 47 328836.0 48 266700.5 49 204565.0 50 173138.0 51 141711.0 52 108811.5 53 75912.0 54 60120.5 55 44329.0 56 38158.5 57 31988.0 58 31663.5 59 31339.0 60 28886.0 61 26433.0 62 23468.0 63 20503.0 64 16745.5 65 12988.0 66 10817.5 67 8647.0 68 7564.5 69 6482.0 70 5928.0 71 5374.0 72 4746.0 73 4118.0 74 3181.5 75 1821.5 76 1398.0 77 1023.5 78 649.0 79 511.5 80 374.0 81 270.5 82 167.0 83 125.5 84 84.0 85 71.0 86 58.0 87 35.5 88 13.0 89 9.0 90 5.0 91 5.5 92 6.0 93 4.5 94 3.0 95 2.5 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3299742.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.660260949921305 #Duplication Level Percentage of deduplicated Percentage of total 1 80.60708049398009 11.817208344530597 2 7.75465263774657 2.273704624907206 3 2.6216880077140514 1.153038909671019 4 1.3037802349470826 0.7645503386269576 5 0.8654469615281025 0.6343839147159245 6 0.606209895922964 0.5332317158793174 7 0.4740066716958734 0.4864343049345627 8 0.39659817667150904 0.46513862098138514 9 0.31966256379958086 0.42177029411004513 >10 3.325338023795795 10.497536719588929 >50 0.4880496016380515 4.984696321347594 >100 0.9909026615302484 39.23830843285795 >500 0.2162799662704595 19.840587264428496 >1k 0.02968141571657938 6.007907225798854 >5k 4.151246953367745E-4 0.3785085924346859 >10k+ 2.0756234766838725E-4 0.5029943751865389 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16530 0.5009482559545564 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 6763 0.204955417726598 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 5676 0.1720134483241417 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4208 0.12752512166102684 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3928 0.11903960976343 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3316 0.10049270518725405 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.023365463118025592 0.0 2 0.0 0.0 0.0 0.08661283215475635 0.0 3 0.0 0.0 0.0 0.12464610869577077 0.0 4 0.0 0.0 0.0 0.18483263236943978 0.0 5 0.0 0.0 0.0 0.32050990653208644 0.0 6 0.0 0.0 0.0 0.4685214783458828 0.0 7 0.0 0.0 0.0 0.5772269468340252 0.0 8 0.0 0.0 0.0 0.787243366299547 0.0 9 0.0 0.0 0.0 0.8688255021150139 0.0 10 0.0 0.0 0.0 0.9875014470828325 0.0 11 0.0 0.0 0.0 1.131330873747099 0.0 12 0.0 0.0 0.0 1.2418243608136637 0.0 13 0.0 0.0 0.0 1.2907069704237484 0.0 14 0.0 0.0 0.0 1.3111328097772492 0.0 15 0.0 0.0 0.0 1.3421049282034778 0.0 16 0.0 0.0 0.0 1.411595209564869 0.0 17 0.0 0.0 0.0 1.4920560455938676 0.0 18 0.0 0.0 0.0 1.6204903292439228 0.0 19 0.0 0.0 0.0 1.6761916537717192 0.0 20 0.0 0.0 0.0 1.7383177230219817 0.0 21 0.0 0.0 0.0 1.8324462942860382 0.0 22 0.0 0.0 0.0 1.9252717333658207 0.0 23 0.0 0.0 0.0 2.0451901997186446 0.0 24 0.0 0.0 0.0 2.1276511921235053 0.0 25 0.0 0.0 0.0 2.1968081140889195 0.0 26 0.0 0.0 0.0 2.272056421380823 0.0 27 0.0 0.0 0.0 2.338849522174764 0.0 28 0.0 0.0 0.0 2.412521948685685 0.0 29 0.0 0.0 0.0 2.4947708032931057 0.0 30 0.0 0.0 0.0 2.611476897284697 0.0 31 0.0 0.0 0.0 2.7254858107088373 0.0 32 0.0 0.0 0.0 2.8243117189162064 0.0 33 0.0 0.0 0.0 2.9236528189173576 0.0 34 0.0 0.0 0.0 3.0259941534823027 0.0 35 0.0 0.0 0.0 3.1882795685238423 0.0 36 0.0 0.0 0.0 3.303470392533719 0.0 37 0.0 0.0 0.0 3.424267715475937 0.0 38 0.0 0.0 0.0 3.539973731279597 0.0 39 0.0 0.0 0.0 3.657679903459119 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACTA 65 0.0 45.000004 14 TCTAGCG 90 0.0 45.000004 1 CGTAGAT 30 2.166742E-6 45.000004 17 ATCGATA 45 3.8562575E-10 45.000004 15 ATAGCCG 55 1.8189894E-12 45.0 1 ACCGAAC 40 6.8212103E-9 45.0 11 CCGTACT 20 7.035208E-4 45.0 43 TACGCGA 35 1.2128476E-7 45.0 21 CGGATTA 20 7.035208E-4 45.0 38 GTTCACG 25 3.8923987E-5 45.0 44 CGTCGGT 20 7.035208E-4 45.0 39 TTACGAG 140 0.0 45.0 1 ACCAACG 20 7.035208E-4 45.0 38 TGGTCGA 80 0.0 45.0 10 TATTGCG 300 0.0 44.25 1 GTTTACG 85 0.0 42.35294 1 CTACGGG 425 0.0 42.35294 3 GTATGCG 85 0.0 42.35294 1 CGAGTAC 80 0.0 42.1875 40 ATGCTCG 160 0.0 42.1875 1 >>END_MODULE