##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545065_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3191622 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.856181590426434 31.0 31.0 33.0 28.0 34.0 2 31.136231671545065 31.0 31.0 34.0 28.0 34.0 3 31.213918502880354 31.0 31.0 34.0 28.0 34.0 4 35.05744038611088 35.0 35.0 37.0 32.0 37.0 5 34.908620444400995 35.0 35.0 37.0 32.0 37.0 6 34.96094681638365 36.0 35.0 37.0 32.0 37.0 7 35.53503391065734 37.0 35.0 37.0 35.0 37.0 8 35.46650574535455 37.0 35.0 37.0 35.0 37.0 9 37.16912309791072 39.0 37.0 39.0 34.0 39.0 10 36.490789636116055 38.0 35.0 39.0 32.0 39.0 11 36.19863097822988 38.0 35.0 39.0 31.0 39.0 12 35.37220385120794 37.0 35.0 39.0 30.0 39.0 13 34.88970091069682 37.0 34.0 39.0 27.0 39.0 14 35.861040561820914 38.0 34.0 40.0 28.0 41.0 15 36.24800931939935 38.0 35.0 40.0 30.0 41.0 16 36.343155298465796 38.0 35.0 40.0 31.0 41.0 17 36.21395892120057 38.0 34.0 40.0 31.0 41.0 18 36.141244169892296 37.0 35.0 40.0 30.0 41.0 19 36.04564544297539 37.0 34.0 40.0 30.0 41.0 20 35.89993332543766 37.0 34.0 40.0 30.0 41.0 21 35.72213501473546 37.0 34.0 40.0 30.0 41.0 22 35.60367957107702 36.0 34.0 40.0 29.0 41.0 23 35.56899093940323 36.0 34.0 40.0 29.0 41.0 24 35.48959745232988 36.0 34.0 40.0 29.0 41.0 25 35.35523379648342 36.0 34.0 40.0 29.0 41.0 26 35.17223217536412 36.0 34.0 40.0 29.0 41.0 27 35.08916594759655 36.0 34.0 40.0 27.0 41.0 28 35.11345140495961 36.0 34.0 40.0 27.0 41.0 29 35.14368305519889 36.0 34.0 40.0 29.0 41.0 30 35.01056516091191 36.0 34.0 40.0 27.0 41.0 31 34.828159788345864 36.0 33.0 40.0 27.0 41.0 32 34.60391863447489 36.0 33.0 40.0 25.0 41.0 33 34.35703382167437 36.0 33.0 40.0 24.0 41.0 34 34.177082060469566 36.0 33.0 40.0 23.0 41.0 35 33.989266899400995 35.0 33.0 40.0 23.0 41.0 36 33.81313764599943 35.0 33.0 40.0 23.0 41.0 37 33.76413184268062 35.0 33.0 40.0 23.0 41.0 38 33.72589485847635 35.0 33.0 40.0 23.0 41.0 39 33.67434896739025 35.0 33.0 40.0 23.0 41.0 40 33.516929009763686 35.0 32.0 40.0 22.0 41.0 41 33.4737412513136 35.0 32.0 40.0 22.0 41.0 42 33.43499731484493 35.0 32.0 40.0 22.0 41.0 43 33.30231148926784 35.0 32.0 39.0 22.0 41.0 44 33.23119999799475 35.0 32.0 39.0 22.0 41.0 45 33.17578710762114 35.0 32.0 39.0 22.0 41.0 46 33.137303853651844 35.0 32.0 39.0 22.0 41.0 47 33.02811642481472 35.0 32.0 39.0 21.0 41.0 48 33.00880806060367 35.0 32.0 39.0 21.0 41.0 49 33.03970833638821 35.0 32.0 39.0 21.0 41.0 50 32.92164610972101 35.0 32.0 39.0 21.0 40.0 51 32.73513530111022 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 4.0 13 11.0 14 56.0 15 144.0 16 455.0 17 1215.0 18 2925.0 19 5490.0 20 9117.0 21 13889.0 22 20614.0 23 29145.0 24 40190.0 25 54266.0 26 69529.0 27 80008.0 28 86659.0 29 95668.0 30 111685.0 31 132621.0 32 161863.0 33 202777.0 34 315036.0 35 413196.0 36 236298.0 37 280313.0 38 366338.0 39 461981.0 40 124.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.65028816069071 23.10301783857863 27.104713528105773 16.14198047262489 2 33.46395657129823 25.323926204293617 28.189209123135512 13.022908101272645 3 29.059738277277198 25.56443087558614 32.08804175431803 13.287789092818636 4 26.591432193411375 27.3204032307084 30.882322530675626 15.205842045204601 5 23.022024537993534 31.418444916095957 30.373521676439125 15.186008869471385 6 20.246351228309617 40.716820475607705 28.65329916888654 10.383529127196141 7 84.52811767809595 4.682039414441936 8.926370353381447 1.8634725540806523 8 85.79405706565501 3.5054903118226406 8.667035131353275 2.0334174911690672 9 81.69360281386706 5.127392905550845 10.217250037755097 2.961754242827001 10 47.768062759311725 23.855989211755027 16.145395664022868 12.23055236491038 11 42.23003225319289 20.933274679770975 22.58484870702107 14.251844360015065 12 37.379113190722464 21.274668491444164 26.711308544683547 14.634909773149829 13 21.180484405734763 36.455319583584775 27.45867148427978 14.905524526400683 14 15.583142364603328 38.84911809731854 31.34111746315823 14.2266220749199 15 14.812249069595335 22.082564915268787 47.856857735659176 15.248328279476706 16 17.517707297418053 17.86966000359692 45.336791136293705 19.27584156269132 17 17.38482815320862 17.634325117448117 31.216039994711153 33.76480673463211 18 21.996339165477615 21.921330282846778 35.57222628494227 20.510104266733343 19 28.822648797382648 22.803577616647587 27.539664784864875 20.834108801104893 20 30.51279255500808 22.025509286500718 26.814610251464615 20.647087907026584 21 23.22934858827267 26.200815760763653 29.743340533434097 20.826495117529582 22 22.548472218827918 23.29097869359216 27.647885620540276 26.512663467039644 23 19.757164225588117 27.54853174968715 27.96327384633895 24.731030178385787 24 20.28420032196795 23.07463101833488 38.58367312921141 18.057495530485753 25 19.407060109248526 23.249589080411152 35.80865779218216 21.534693018158166 26 17.667286414243293 31.37223017011413 28.970473320462137 21.990010095180445 27 18.175805280199224 30.50524153549512 30.566370328315823 20.752582855989836 28 16.314870620643674 27.54442725360334 37.89186188088689 18.24884024486609 29 17.69589255870526 24.27793767557687 37.25804622226567 20.7681235434522 30 19.607303120482314 27.89653661993807 33.22486184140854 19.271298418171074 31 28.693905481288194 26.08927372978379 26.01266691356307 19.20415387536494 32 29.394051049905034 25.730709965027188 27.29251772296343 17.582721262104346 33 27.52017626147457 26.14329015152797 25.92202334737635 20.41451023962111 34 20.55929555567671 28.082554889018812 28.43789145456448 22.92025810074 35 20.630419266441955 25.812956546859244 31.089051272362454 22.467572914336348 36 29.32123540945638 25.71391599631786 26.44401498673715 18.52083360748861 37 21.41854517859571 31.433076974654266 28.337096310277342 18.811281536472677 38 22.268896504661267 32.37639043721343 23.8125630165477 21.542150041577603 39 21.156170749543648 30.357886992883245 26.37207664316138 22.113865614411733 40 23.766504930721748 25.266024610683846 27.043271414973326 23.92419904362108 41 18.746267571786383 24.560677924892108 28.618645942407966 28.074408560913543 42 22.487594082256606 26.06950321811292 24.65871585043592 26.784186849194548 43 22.36458452786702 25.93533946062535 26.70125096267666 24.99882504883097 44 20.25709811500234 28.567449403469457 29.04234899997556 22.13310348155264 45 18.738967208522812 34.169271925058794 25.14035183364446 21.95140903277393 46 22.393973973108345 30.631133636752722 26.943948876151374 20.03094351398756 47 21.781589423810214 28.44002203268432 26.756238677387234 23.02214986611823 48 22.683231284907798 25.774825464920344 29.896992814311968 21.644950435859887 49 21.91616049770305 25.409149329087217 31.30367568590516 21.371014487304574 50 20.28532827509022 31.727566735659803 27.40662898049957 20.58047600875041 51 18.857088966049236 33.38863436835565 25.98246283551122 21.77181383008389 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2749.0 1 4395.5 2 6042.0 3 20941.0 4 35840.0 5 26842.0 6 17844.0 7 18449.0 8 19054.0 9 20134.5 10 21215.0 11 21310.5 12 21406.0 13 20634.5 14 19863.0 15 18598.5 16 17334.0 17 16369.5 18 15405.0 19 15297.0 20 15189.0 21 14798.0 22 14407.0 23 14561.0 24 14715.0 25 17076.5 26 21317.5 27 23197.0 28 27509.0 29 31821.0 30 36301.0 31 40781.0 32 50717.5 33 60654.0 34 67244.0 35 73834.0 36 80323.5 37 86813.0 38 100415.0 39 114017.0 40 157639.5 41 201262.0 42 244875.5 43 288489.0 44 288574.5 45 288660.0 46 282262.0 47 275864.0 48 260509.5 49 245155.0 50 230252.5 51 215350.0 52 203177.0 53 191004.0 54 176818.5 55 162633.0 56 162264.5 57 161896.0 58 154934.0 59 147972.0 60 131982.0 61 115992.0 62 103478.5 63 90965.0 64 73745.0 65 56525.0 66 43799.0 67 31073.0 68 25080.0 69 19087.0 70 15468.0 71 11849.0 72 10011.0 73 8173.0 74 6442.0 75 3226.5 76 1742.0 77 1310.5 78 879.0 79 655.5 80 432.0 81 292.5 82 153.0 83 116.5 84 80.0 85 64.0 86 48.0 87 27.5 88 7.0 89 4.5 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3191622.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.255270696037385 #Duplication Level Percentage of deduplicated Percentage of total 1 81.37892332618092 14.042153509453229 2 6.465394314849243 2.2312425811868972 3 2.302488329063701 1.1919017817738289 4 1.3119246406606788 0.9055045922960636 5 0.8290723220387711 0.715293367168564 6 0.6040314973239482 0.6253636197154504 7 0.46586784707259066 0.562707306687239 8 0.3704657573638911 0.5113989541541157 9 0.28825826742627225 0.44765769913299575 >10 3.3868616302126444 13.81636160152873 >50 1.0868576664251748 13.501706266257784 >100 1.4902625612685687 48.00562109794142 >500 0.01574671261459557 1.7169467931819595 >1k 0.0034789248799687884 0.8994990192276906 >5k 1.831013094720415E-4 0.2587283972060259 >10k+ 1.831013094720415E-4 0.5679134130880835 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17975 0.5631932603547664 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 8189 0.25657800328485014 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02146244135427065 0.0 2 0.0 0.0 0.0 0.07792276153003082 0.0 3 0.0 0.0 0.0 0.11229399972803797 0.0 4 0.0 0.0 0.0 0.1603886675803087 0.0 5 0.0 0.0 0.0 0.26629093294882666 0.0 6 0.0 0.0 0.0 0.38450668656877285 0.0 7 0.0 0.0 0.0 0.45672701842511426 0.0 8 0.0 0.0 0.0 0.6549961116949313 0.0 9 0.0 0.0 0.0 0.7255245138678703 0.0 10 0.0 0.0 0.0 0.8241264159728189 0.0 11 0.0 0.0 0.0 0.9330992203964004 0.0 12 0.0 0.0 0.0 1.0417273724770666 0.0 13 0.0 0.0 0.0 1.088976075487636 0.0 14 0.0 0.0 0.0 1.1088405832520267 0.0 15 0.0 0.0 0.0 1.1402039464573186 0.0 16 0.0 0.0 0.0 1.2085077744168953 0.0 17 0.0 0.0 0.0 1.284049301577693 0.0 18 0.0 0.0 0.0 1.4190590239069665 0.0 19 0.0 0.0 0.0 1.464177148797696 0.0 20 0.0 0.0 0.0 1.5180682424171785 0.0 21 0.0 0.0 0.0 1.5842728242880892 0.0 22 0.0 0.0 0.0 1.6491614608496872 0.0 23 0.0 0.0 0.0 1.727115554410892 0.0 24 0.0 0.0 0.0 1.7858004488000145 0.0 25 0.0 0.0 0.0 1.83355046430937 0.0 26 0.0 0.0 0.0 1.887284897772982 0.0 27 3.1332031174117735E-5 0.0 0.0 1.9388260890544056 0.0 28 3.1332031174117735E-5 0.0 0.0 1.9964456943836082 0.0 29 3.1332031174117735E-5 0.0 0.0 2.054221959868681 0.0 30 3.1332031174117735E-5 0.0 0.0 2.13114209640114 0.0 31 3.1332031174117735E-5 0.0 0.0 2.206965611842505 0.0 32 3.1332031174117735E-5 0.0 0.0 2.2741728187109875 0.0 33 3.1332031174117735E-5 0.0 0.0 2.3458918380685434 0.0 34 6.266406234823547E-5 0.0 0.0 2.4167962246155716 0.0 35 9.39960935223532E-5 0.0 0.0 2.504463247840753 0.0 36 9.39960935223532E-5 0.0 0.0 2.5817907007784755 0.0 37 9.39960935223532E-5 0.0 0.0 2.6586795052797605 0.0 38 9.39960935223532E-5 0.0 0.0 2.738638848836109 0.0 39 9.39960935223532E-5 0.0 0.0 2.8222640400398293 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATCG 20 7.0351723E-4 45.000004 9 TATATCG 25 3.8923703E-5 45.0 1 CGGTCTA 585 0.0 43.46154 31 CGTTTTT 16255 0.0 43.43587 1 CGACGGT 585 0.0 42.69231 28 TATAGCG 55 6.184564E-11 40.90909 1 CGCATCG 205 0.0 40.609756 21 ACGTAAG 135 0.0 40.0 1 CTCACGA 625 0.0 39.96 24 TGGGCGA 1205 0.0 39.771786 6 GCGCGAC 1815 0.0 39.545456 9 ACCCGCT 1835 0.0 39.48229 34 CTATCGT 40 3.460791E-7 39.375004 19 GTACGTC 40 3.460791E-7 39.375004 19 AGGGTAC 1940 0.0 39.20103 6 TAGTAGG 1905 0.0 39.094486 2 CATATGC 3025 0.0 39.049587 33 CGTAAGG 490 0.0 39.030613 2 GACGGTC 645 0.0 38.720932 29 CTACGTT 35 6.251781E-6 38.571426 30 >>END_MODULE