##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545063_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3885047 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.971501245673476 31.0 31.0 33.0 30.0 34.0 2 31.242091022322253 31.0 31.0 34.0 28.0 34.0 3 31.30948402940814 31.0 31.0 34.0 28.0 34.0 4 35.12486721524862 35.0 35.0 37.0 32.0 37.0 5 34.99275658698595 35.0 35.0 37.0 32.0 37.0 6 35.045324805594376 37.0 35.0 37.0 32.0 37.0 7 35.67039188972489 37.0 35.0 37.0 35.0 37.0 8 35.64386351053153 37.0 35.0 37.0 35.0 37.0 9 37.387838036451036 39.0 37.0 39.0 35.0 39.0 10 36.65840541954834 39.0 35.0 39.0 32.0 39.0 11 36.228308692275796 38.0 35.0 39.0 31.0 39.0 12 35.44080779460326 37.0 35.0 39.0 30.0 39.0 13 34.958283644959764 37.0 34.0 39.0 28.0 39.0 14 35.95095400390266 38.0 34.0 40.0 29.0 41.0 15 36.365374472947174 38.0 35.0 40.0 31.0 41.0 16 36.47296802329547 38.0 35.0 40.0 31.0 41.0 17 36.3702403085471 38.0 35.0 40.0 31.0 41.0 18 36.30718650250563 38.0 35.0 40.0 31.0 41.0 19 36.22554990969221 37.0 35.0 40.0 31.0 41.0 20 36.09486140064715 37.0 34.0 40.0 31.0 41.0 21 35.92146632975096 37.0 34.0 40.0 30.0 41.0 22 35.82482940360824 37.0 34.0 40.0 30.0 41.0 23 35.79898081027076 36.0 34.0 40.0 30.0 41.0 24 35.733884557895955 36.0 34.0 40.0 30.0 41.0 25 35.62307817640301 36.0 34.0 40.0 30.0 41.0 26 35.49135029769267 36.0 34.0 40.0 29.0 41.0 27 35.3696681146972 36.0 34.0 40.0 29.0 41.0 28 35.44820667549196 36.0 34.0 40.0 29.0 41.0 29 35.536982435476325 36.0 34.0 40.0 30.0 41.0 30 35.431928365345385 36.0 34.0 40.0 29.0 41.0 31 35.219804290655944 36.0 34.0 40.0 29.0 41.0 32 34.98983718858485 36.0 34.0 40.0 27.0 41.0 33 34.75802429159802 36.0 33.0 40.0 26.0 41.0 34 34.61686795552281 36.0 34.0 40.0 25.0 41.0 35 34.42198459889932 36.0 33.0 40.0 24.0 41.0 36 34.23095061655625 36.0 33.0 40.0 23.0 41.0 37 34.20176564144526 36.0 33.0 40.0 23.0 41.0 38 34.18937248378205 36.0 33.0 40.0 23.0 41.0 39 34.14723013646939 36.0 33.0 40.0 23.0 41.0 40 34.02573096284292 36.0 33.0 40.0 23.0 41.0 41 34.012409373683255 36.0 33.0 40.0 23.0 41.0 42 33.98546117974892 36.0 33.0 40.0 23.0 41.0 43 33.878364148490355 35.0 33.0 40.0 23.0 41.0 44 33.821457243631805 35.0 33.0 40.0 23.0 41.0 45 33.76597657634515 35.0 33.0 40.0 23.0 41.0 46 33.72665324254765 35.0 33.0 40.0 23.0 41.0 47 33.648389067107814 35.0 33.0 40.0 23.0 41.0 48 33.62023599714495 35.0 33.0 40.0 23.0 41.0 49 33.66139843353246 36.0 33.0 40.0 23.0 41.0 50 33.53232715073975 35.0 33.0 39.0 23.0 41.0 51 33.3376134188338 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 2.0 12 5.0 13 6.0 14 24.0 15 120.0 16 410.0 17 1147.0 18 2696.0 19 5160.0 20 8772.0 21 14091.0 22 21019.0 23 30348.0 24 43051.0 25 59936.0 26 76103.0 27 86333.0 28 92808.0 29 104554.0 30 123314.0 31 151763.0 32 189112.0 33 240823.0 34 383941.0 35 519091.0 36 277420.0 37 333026.0 38 461087.0 39 658673.0 40 210.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.58005553085973 22.855759531351875 29.700747507044316 15.863437430744082 2 31.333932382285205 25.738427360080845 30.766500379532086 12.16113987810186 3 27.379205451053746 25.506255136681744 34.31520905667293 12.799330355591579 4 24.348920360551624 28.45082697841236 33.3781290161998 13.822123644836214 5 22.925050842370762 31.870476727823373 32.2026477414559 13.001824688349975 6 20.08655236345918 40.904781846912016 28.702844521572068 10.30582126805673 7 87.66277473605854 3.824586935499107 7.5243877358497855 0.9882505925925735 8 89.59925066543597 2.610212952378697 6.854048355142164 0.9364880270431735 9 85.55196372141701 4.949206534695719 7.927265744790217 1.5715639990970507 10 47.63363223147622 32.521099487342106 12.605098471138188 7.240169810043483 11 40.479973601348966 20.7314866461075 27.351921353847196 11.436618398696336 12 36.48650840002708 23.742209553706815 27.178950473443436 12.59233157282267 13 20.242535032394716 40.01174245768455 26.726832390959494 13.018890118961238 14 14.868726169850714 41.62291987715979 30.132428256337697 13.375925696651802 15 13.726629304613303 24.7199583428463 48.328655998241466 13.22475635429893 16 16.365490559058873 21.588670613251267 45.08583808638609 16.960000741303773 17 16.701574009271962 21.2402321001522 30.974837627446977 31.083356263128863 18 20.744227804708668 23.945038502751704 36.390988320089825 18.919745372449807 19 27.150971403949555 24.482071902862437 29.298847607249023 19.068109085938985 20 28.78603527833769 23.803907648993693 28.93370401953953 18.47635305312909 21 20.97511304239048 28.336542646717017 31.40034084529737 19.28800346559514 22 21.616778381316877 24.379061566050552 29.575884152752852 24.42827589987972 23 17.04625452407654 30.352374115422542 29.81796616617508 22.783405194325834 24 17.3604592170957 25.02147335669298 41.63795187033774 15.980115555873583 25 15.523184146806976 26.671466265401676 39.139964072506714 18.66538551528463 26 16.485000052766413 35.59030302593508 29.725946687388856 18.198750233909657 27 16.083975303258878 35.31429606900509 31.39287632813709 17.208852299598952 28 13.944001192263569 29.397353494050392 40.65876165719488 15.999883656491157 29 14.67853542054961 25.263349452400448 40.05151031634881 20.00660481070113 30 17.548565049534794 30.634378425795106 33.798947606039256 18.018108918630844 31 26.614684455554848 26.901527832224424 28.824670589570733 17.659117122649995 32 26.871541065011566 27.439693779766372 29.97474676625534 15.714018388966721 33 26.01178312643322 28.05747266377987 28.0903680187138 17.84037619107311 34 18.908111021565503 28.49028596050447 30.4043940781154 22.19720893981463 35 19.60331496633117 26.703100374332667 33.28201692283259 20.411567736503574 36 27.94751260409462 25.997754982114756 28.623720639673085 17.431011774117533 37 19.406637809014924 32.63456014817839 30.840502058276257 17.118299984530434 38 19.519454976992556 33.20667677894244 26.407659933071592 20.866208310993407 39 20.045960833935858 31.967644149478758 29.372566149135395 18.613828867449993 40 23.211533863039495 27.433413289465996 26.86832360071834 22.486729246776164 41 17.003552337976863 26.23818965381886 29.17403573238625 27.58422227581803 42 21.189705040891397 26.465780208064405 26.64420790790948 25.70030684313472 43 21.24126168872603 27.83714070897984 27.540490501144514 23.381107101149613 44 18.922756919028263 31.114089482057743 30.25731735034351 19.70583624857048 45 17.194412319850958 37.89650421217555 24.899647288694318 20.00943617927917 46 21.17982099058261 33.059136736312325 27.725507567862113 18.03553470524295 47 20.826852287758683 28.03410100315389 28.812289786970403 22.32675692211703 48 22.162177188589997 25.53065638588156 32.79968041570668 19.507486009821758 49 21.4629063689577 25.41961525819379 32.65852382223432 20.458954550614187 50 19.234542078898915 33.98610106904756 27.72218714471151 19.057169707342023 51 18.19597034476031 33.569426573217775 26.816483816025904 21.418119265996012 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3440.0 1 4223.5 2 5007.0 3 20049.0 4 35091.0 5 27045.0 6 18999.0 7 20167.5 8 21336.0 9 22951.5 10 24567.0 11 25152.0 12 25737.0 13 25468.0 14 25199.0 15 23656.0 16 22113.0 17 21188.0 18 20263.0 19 20302.5 20 20342.0 21 21049.5 22 21757.0 23 23958.0 24 26159.0 25 29780.0 26 36046.0 27 38691.0 28 50168.5 29 61646.0 30 72868.5 31 84091.0 32 99047.0 33 114003.0 34 129389.5 35 144776.0 36 148637.5 37 152499.0 38 180583.0 39 208667.0 40 263802.5 41 318938.0 42 361103.0 43 403268.0 44 418687.0 45 434106.0 46 399766.5 47 365427.0 48 332731.0 49 300035.0 50 277895.0 51 255755.0 52 229028.0 53 202301.0 54 181962.5 55 161624.0 56 139181.0 57 116738.0 58 103387.0 59 90036.0 60 74009.5 61 57983.0 62 46316.0 63 34649.0 64 26773.5 65 18898.0 66 14048.5 67 9199.0 68 6542.5 69 3886.0 70 2941.0 71 1996.0 72 1568.5 73 1141.0 74 901.0 75 488.0 76 315.0 77 221.0 78 127.0 79 110.5 80 94.0 81 74.5 82 55.0 83 34.0 84 13.0 85 8.0 86 3.0 87 3.0 88 3.0 89 2.0 90 1.0 91 2.0 92 3.0 93 5.0 94 7.0 95 4.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3885047.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.670995927927258 #Duplication Level Percentage of deduplicated Percentage of total 1 81.16774125980756 12.719793427614976 2 7.756623608469574 2.4310803396558223 3 2.6104904322154088 1.2272695479942222 4 1.2946565484767798 0.8115422999697589 5 0.7525550845956273 0.5896643833119515 6 0.5077791070760028 0.4774442591564748 7 0.3592079021060986 0.39404018998287754 8 0.2761655449035548 0.3462231303693936 9 0.21779661354019453 0.3071780859514261 >10 2.4148508023682314 8.899491452418818 >50 0.941439364918921 10.696968952443774 >100 1.6622562911656882 55.999321525929936 >500 0.034295474800801744 3.4707214717786234 >1k 0.0038106083112001933 0.7978320885888023 >5k 0.0 0.0 >10k+ 3.3135724445219075E-4 0.8314288448331939 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19574 0.5038291686046527 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 12449 0.32043370389084097 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.019124607758928013 0.0 2 0.0 0.0 0.0 0.07034663930706629 0.0 3 0.0 0.0 0.0 0.10110559795029507 0.0 4 0.0 0.0 0.0 0.1450175506242267 0.0 5 0.0 0.0 0.0 0.2439867522838205 0.0 6 0.0 0.0 0.0 0.345169569377153 0.0 7 0.0 0.0 0.0 0.4095960743846857 0.0 8 0.0 0.0 0.0 0.5834678447905521 0.0 9 0.0 0.0 0.0 0.6673278341291624 0.0 10 0.0 0.0 0.0 0.8123453847533891 0.0 11 0.0 0.0 0.0 0.95427416965612 0.0 12 0.0 0.0 0.0 1.085083397961466 0.0 13 0.0 0.0 0.0 1.1395228938028292 0.0 14 0.0 0.0 0.0 1.1608868567098416 0.0 15 0.0 0.0 0.0 1.1956097313623233 0.0 16 0.0 0.0 0.0 1.2772303655528492 0.0 17 0.0 0.0 0.0 1.3798803463638922 0.0 18 2.5739714345798133E-5 0.0 0.0 1.5368153847302233 0.0 19 2.5739714345798133E-5 0.0 0.0 1.6078055168959346 0.0 20 2.5739714345798133E-5 0.0 0.0 1.6849989202189832 0.0 21 2.5739714345798133E-5 0.0 0.0 1.7769411798621741 0.0 22 5.1479428691596266E-5 0.0 0.0 1.8735423278019545 0.0 23 7.72191430373944E-5 0.0 0.0 1.987466303496457 0.0 24 7.72191430373944E-5 0.0 0.0 2.0722014431228244 0.0 25 7.72191430373944E-5 0.0 0.0 2.1418016307138625 0.0 26 7.72191430373944E-5 0.0 0.0 2.210217791444994 0.0 27 7.72191430373944E-5 0.0 0.0 2.2811564441820136 0.0 28 7.72191430373944E-5 0.0 0.0 2.3597140523653897 0.0 29 7.72191430373944E-5 0.0 0.0 2.447048903140683 0.0 30 7.72191430373944E-5 0.0 0.0 2.5679483414228965 0.0 31 7.72191430373944E-5 0.0 0.0 2.6712675548069305 0.0 32 7.72191430373944E-5 0.0 0.0 2.766144141885542 0.0 33 7.72191430373944E-5 0.0 0.0 2.862951207540089 0.0 34 7.72191430373944E-5 0.0 0.0 2.970568953219871 0.0 35 7.72191430373944E-5 0.0 0.0 3.098340895232413 0.0 36 7.72191430373944E-5 0.0 0.0 3.212084692926495 0.0 37 7.72191430373944E-5 0.0 0.0 3.3289172563420726 0.0 38 7.72191430373944E-5 0.0 0.0 3.4410137123180236 0.0 39 7.72191430373944E-5 0.0 0.0 3.5635862320327143 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGCGAT 20 7.035361E-4 45.000004 38 CGTCCCG 20 7.035361E-4 45.000004 43 CGTTATC 25 3.8925275E-5 45.0 20 GTATCGC 25 3.8925275E-5 45.0 9 TCGACGA 25 3.8925275E-5 45.0 39 CGACGAT 30 2.166842E-6 44.999996 34 CGGTCCG 225 0.0 44.0 29 CGACGGT 385 0.0 43.831165 28 CGTTTTT 20505 0.0 43.32114 1 TCACGAC 395 0.0 43.29114 25 GGTCGAA 95 0.0 42.63158 9 CTACGCG 80 0.0 42.187504 1 CTCGTAG 140 0.0 41.785713 1 CGTTAGG 690 0.0 41.739132 2 CGTAGGT 60 3.6379788E-12 41.249996 24 CGCGAGG 575 0.0 41.08696 2 GCGTAAG 230 0.0 41.08696 1 GCGATAT 630 0.0 41.07143 9 ACGGTCC 55 6.184564E-11 40.909092 26 GGCGTAT 50 1.0822987E-9 40.5 45 >>END_MODULE