SRR1545062_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545062_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1932543
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8649	0.4475450222841096	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	5329	0.2757506560009273	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	2194	0.11352916856183794	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGTTAC	30	2.1662727E-6	45.000004	1
ATCCGTT	25	3.8917955E-5	45.000004	39
CGTTACA	25	3.8917955E-5	45.000004	26
CTACGTC	25	3.8917955E-5	45.000004	42
GTATCGC	30	2.1662727E-6	45.000004	37
ACGTCGT	25	3.8917955E-5	45.000004	19
TAGTCGA	25	3.8917955E-5	45.000004	10
GCGTAAG	140	0.0	45.000004	1
ACGTTAG	55	1.8189894E-12	45.0	1
TATGCGA	45	3.8562575E-10	45.0	22
AATGCGC	20	7.0344826E-4	45.0	26
TCGCTAA	20	7.0344826E-4	45.0	13
ACTACGT	20	7.0344826E-4	45.0	10
CATCGTA	20	7.0344826E-4	45.0	40
CGGTATG	55	1.8189894E-12	45.0	6
GTATGCG	145	0.0	43.448273	1
ACGTTGT	135	0.0	43.333336	28
CGTTTTT	8440	0.0	43.00059	1
TAGTACG	85	0.0	42.352943	1
AATACGG	150	0.0	42.0	2