SRR1545061_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545061_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2894496
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14014	0.48416028213547363	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	8475	0.29279708799044807	No Hit
AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	4259	0.14714133306800217	No Hit
TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC	3190	0.11020916940289432	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACCTA	30	2.1666492E-6	45.000004	26
TACGATG	30	2.1666492E-6	45.000004	1
TCCGTCG	30	2.1666492E-6	45.000004	33
CGAACTA	20	7.0350646E-4	45.0	16
ACGTTCC	20	7.0350646E-4	45.0	33
TAGACGT	25	3.8922797E-5	45.0	21
TACGCAT	20	7.0350646E-4	45.0	45
ATCGGGT	35	1.212793E-7	45.0	12
CGTCCTA	25	3.8922797E-5	45.0	41
TCGAATC	20	7.0350646E-4	45.0	43
AATCGTC	20	7.0350646E-4	45.0	21
CCCGATA	25	3.8922797E-5	45.0	40
TCGTAAG	120	0.0	43.125004	1
CGTTTTT	13675	0.0	42.992687	1
TCGTACA	175	0.0	42.42857	34
TATAGCG	85	0.0	42.35294	1
ATGACGG	405	0.0	42.222225	2
GTACGTA	160	0.0	42.1875	11
ACGGGAT	615	0.0	42.07317	5
CGTAAGG	510	0.0	41.911766	2