##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545061_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2894496 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.053997656241364 31.0 31.0 33.0 30.0 34.0 2 31.346935010447414 31.0 31.0 34.0 30.0 34.0 3 31.426596892861486 31.0 31.0 34.0 30.0 34.0 4 35.23751699777785 37.0 35.0 37.0 33.0 37.0 5 35.109146462803885 37.0 35.0 37.0 32.0 37.0 6 35.17165751826916 37.0 35.0 37.0 32.0 37.0 7 35.663768061866385 37.0 35.0 37.0 35.0 37.0 8 35.60750265331166 37.0 35.0 37.0 35.0 37.0 9 37.33046409461267 39.0 37.0 39.0 35.0 39.0 10 36.736368265839715 39.0 37.0 39.0 32.0 39.0 11 36.42944125678529 38.0 35.0 39.0 32.0 39.0 12 35.33024954948979 37.0 35.0 39.0 30.0 39.0 13 34.710299133251524 37.0 33.0 39.0 27.0 39.0 14 35.63354311078682 37.0 34.0 40.0 27.0 41.0 15 36.09417287154655 37.0 34.0 40.0 30.0 41.0 16 36.26122060628172 37.0 35.0 40.0 31.0 41.0 17 36.21302845123987 37.0 34.0 40.0 31.0 41.0 18 36.17418956529911 37.0 35.0 40.0 31.0 41.0 19 36.06895259140106 37.0 35.0 40.0 31.0 41.0 20 35.88962258023504 36.0 34.0 40.0 31.0 41.0 21 35.71354425779134 36.0 34.0 40.0 30.0 41.0 22 35.60934787956176 35.0 34.0 40.0 30.0 41.0 23 35.623039036847864 35.0 34.0 40.0 30.0 41.0 24 35.52225257868727 35.0 34.0 40.0 30.0 41.0 25 35.418243452400695 35.0 34.0 40.0 30.0 41.0 26 35.29933086796458 35.0 34.0 40.0 29.0 41.0 27 35.184343664665626 35.0 34.0 40.0 29.0 41.0 28 35.2604857633246 36.0 34.0 40.0 29.0 41.0 29 35.33136787889843 36.0 34.0 40.0 30.0 41.0 30 35.24197338673123 36.0 34.0 40.0 29.0 41.0 31 35.02419523122506 35.0 34.0 40.0 29.0 41.0 32 34.76514426000243 35.0 34.0 40.0 27.0 41.0 33 34.534803641117485 35.0 33.0 40.0 27.0 41.0 34 34.412801399621905 35.0 34.0 40.0 26.0 41.0 35 34.24030124760925 35.0 33.0 40.0 25.0 41.0 36 34.00835827722685 35.0 33.0 40.0 23.0 41.0 37 33.953266129923826 35.0 33.0 40.0 23.0 41.0 38 33.97165689639923 35.0 33.0 40.0 23.0 41.0 39 33.92410215802682 35.0 33.0 40.0 23.0 41.0 40 33.75584315887809 35.0 33.0 40.0 23.0 41.0 41 33.77033410997977 35.0 33.0 39.0 23.0 41.0 42 33.7419644041657 35.0 33.0 39.0 23.0 41.0 43 33.608734301239316 35.0 33.0 39.0 23.0 41.0 44 33.5181969503499 35.0 33.0 39.0 23.0 41.0 45 33.46766276408743 35.0 33.0 39.0 23.0 41.0 46 33.438455606779215 35.0 33.0 39.0 23.0 41.0 47 33.39190657026301 35.0 32.0 39.0 23.0 41.0 48 33.401914530198006 35.0 33.0 39.0 23.0 41.0 49 33.435745635855085 35.0 33.0 39.0 24.0 41.0 50 33.333607992548615 35.0 32.0 39.0 23.0 41.0 51 33.13450735464827 35.0 32.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 1.0 12 7.0 13 14.0 14 31.0 15 90.0 16 256.0 17 755.0 18 1781.0 19 3385.0 20 5801.0 21 9683.0 22 14679.0 23 21412.0 24 30897.0 25 43798.0 26 56800.0 27 65793.0 28 70821.0 29 79438.0 30 93991.0 31 115441.0 32 145477.0 33 191300.0 34 326949.0 35 450956.0 36 191972.0 37 232252.0 38 312080.0 39 428403.0 40 232.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.452866405757682 24.917256752125414 29.201940510541384 15.427936331575514 2 31.93664803820769 25.58614694924436 29.42239339767614 13.054811614871811 3 29.59064375974263 24.521954772091583 33.09733369816369 12.7900677700021 4 27.46004831238323 26.26771638309398 31.775791018540016 14.496444285982776 5 23.32478607674704 32.07525593402099 30.773060318618512 13.826897670613466 6 20.63509502172399 41.57870662111815 28.091349927586702 9.694848429571158 7 85.32013863553448 5.028682022707925 7.987608205366323 1.663571136391275 8 87.20823936187855 3.8073640454158517 7.459122417166926 1.5252741755386776 9 82.83193343504361 5.518819165754591 9.1323670856688 2.5168803135329947 10 54.0279205775375 21.29178965871779 15.04631548981239 9.633974273932317 11 50.222560335201706 18.84690806275082 19.14105253557096 11.789479066476513 12 44.68629426331907 20.51721612329055 22.9218834643406 11.874606149049782 13 21.245425801244846 42.267012979116224 22.89172277315291 13.59583844648602 14 14.61573966590384 44.1967789901938 27.44097763479376 13.746503709108598 15 14.22344339049009 22.307061402054103 49.734116060274395 13.735379147181408 16 14.103491592318662 16.709472046256067 49.1818610217461 20.00517533967917 17 14.565264557283895 18.063213768476448 30.171677556299958 37.1998441179397 18 20.58202878843156 22.730589366853504 36.23439106497297 20.452990779741963 19 30.602564315169207 22.831850519054093 26.11508186572032 20.450503300056383 20 31.386362254430477 22.322919085049694 25.653550739057852 20.637167921461973 21 21.269644179850307 28.2725559130156 29.31878295910583 21.139016948028257 22 21.74050335533371 24.935878301438315 25.557920964478793 27.76569737874918 23 18.653610162183675 30.547425182138788 25.425359026234617 25.373605629442913 24 18.782440880899472 22.88163466109471 41.32059605540999 17.015328402595824 25 16.67834400185732 23.90481797176434 38.36861408687385 21.048223939504492 26 15.287428277669065 34.52079394823831 28.732670558190442 21.459107215902183 27 16.624759543630393 34.913297513625864 30.000939714547886 18.461003228195857 28 14.767786861685073 29.222324024631575 40.262311642510475 15.747577471172875 29 15.465801300122717 24.512453981625818 39.414702939648215 20.607041778603254 30 17.666460758626027 30.441396360540836 34.02146694968658 17.87067593114656 31 30.485272738328195 26.712284280233934 25.297979337335413 17.50446364410246 32 31.134574032923172 26.454415552828543 26.460461510397664 15.95054890385062 33 28.59181702099433 27.1882220600754 24.445810255049583 19.77415066388069 34 18.90950963483798 28.363728953157995 28.699193227421976 24.027568184582048 35 20.6666721943993 24.633718616297966 32.389887565918215 22.309721623384522 36 31.21306783633489 25.09721899771152 26.018484737930198 17.671228428023394 37 19.396952008225266 34.09678230683338 29.13070185621262 17.375563828728733 38 20.957603672625563 34.40775181586017 23.436273534321693 21.198370977192575 39 21.12391932826993 32.113328192541985 26.722717875581793 20.040034603606294 40 23.723404696361648 26.258353785944085 25.924340541496687 24.09390097619758 41 17.155318231567776 24.523716736868874 28.300090931201836 30.02087410036151 42 21.939674471825146 25.813820437133096 23.44777812786751 28.798726963174243 43 22.447189424341925 25.985041955490694 25.372258244613228 26.195510375554154 44 19.07748361027274 30.930117022099875 28.42850706997004 21.563892297657347 45 16.74509137342045 38.84123522713453 23.474725824461323 20.938947574983693 46 21.52713287563707 34.11782223917393 25.916705360795113 18.438339524393886 47 22.191462693332447 28.62861099134357 26.80960692293235 22.37031939239163 48 22.897285054116505 25.111314715929822 30.991923982620804 20.99947624733287 49 20.672096282047033 25.57243126264469 33.02664781709838 20.7288246382099 50 19.400614131095708 34.00906409958763 27.173055343659136 19.417266425657523 51 18.421134456568605 35.31150155329287 24.250992228007917 22.01637176213061 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2336.0 1 3462.5 2 4589.0 3 15190.0 4 25791.0 5 19819.5 6 13848.0 7 15012.5 8 16177.0 9 17056.0 10 17935.0 11 18055.5 12 18176.0 13 17593.5 14 17011.0 15 15745.0 16 14479.0 17 13725.0 18 12971.0 19 12367.5 20 11764.0 21 12255.5 22 12747.0 23 13215.5 24 13684.0 25 15357.5 26 19370.5 27 21710.0 28 27913.0 29 34116.0 30 40450.5 31 46785.0 32 53032.0 33 59279.0 34 63307.0 35 67335.0 36 70019.5 37 72704.0 38 91558.5 39 110413.0 40 159880.0 41 209347.0 42 257858.0 43 306369.0 44 308338.0 45 310307.0 46 284830.0 47 259353.0 48 244315.0 49 229277.0 50 218093.0 51 206909.0 52 184859.0 53 162809.0 54 154565.0 55 146321.0 56 134961.5 57 123602.0 58 112089.5 59 100577.0 60 90964.5 61 81352.0 62 69437.5 63 57523.0 64 47949.0 65 38375.0 66 29939.5 67 21504.0 68 16983.5 69 12463.0 70 9640.0 71 6817.0 72 5896.0 73 4975.0 74 4065.5 75 2242.5 76 1329.0 77 1077.5 78 826.0 79 525.0 80 224.0 81 161.0 82 98.0 83 86.0 84 74.0 85 46.0 86 18.0 87 11.5 88 5.0 89 3.0 90 1.0 91 2.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2894496.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.778436709379623 #Duplication Level Percentage of deduplicated Percentage of total 1 82.0357758232681 12.123605209090226 2 7.101139226822362 2.098874732561744 3 2.4038452000948842 1.0657522244624473 4 1.1877844328216434 0.7021438825936411 5 0.6996893953164585 0.5170157722454191 6 0.48012154081009917 0.4257267482203125 7 0.33537052239553883 0.3469376427589836 8 0.26523094033892236 0.3135758932134405 9 0.22469629657261297 0.29885939979573184 >10 2.595201770924017 9.003166305580535 >50 0.8782575963032123 9.40151194880919 >100 1.7454402184178666 57.605887530125074 >500 0.04040044642211963 3.7666214413396424 >1k 0.006576816859414823 1.5496712807760247 >5k 2.3488631640767224E-4 0.29418865453882603 >10k+ 2.3488631640767224E-4 0.48646133388874424 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14014 0.48416028213547363 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 8475 0.29279708799044807 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 4259 0.14714133306800217 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 3190 0.11020916940289432 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.014786684797629708 0.0 2 0.0 0.0 0.0 0.054240876477286544 0.0 3 0.0 0.0 0.0 0.07552264712060407 0.0 4 0.0 0.0 0.0 0.10727256144074823 0.0 5 0.0 0.0 0.0 0.17353625639835052 0.0 6 0.0 0.0 0.0 0.2523064464417985 0.0 7 0.0 0.0 0.0 0.305890904668723 0.0 8 0.0 0.0 0.0 0.4674734392446906 0.0 9 0.0 0.0 0.0 0.5427887963914961 0.0 10 0.0 0.0 0.0 0.6603567598642389 0.0 11 0.0 0.0 0.0 0.7590267873923474 0.0 12 0.0 0.0 0.0 0.8563494300907654 0.0 13 0.0 0.0 0.0 0.897980166495307 0.0 14 0.0 0.0 0.0 0.9130086895957016 0.0 15 0.0 0.0 0.0 0.9362597149901054 0.0 16 0.0 0.0 0.0 0.9933335544426387 0.0 17 0.0 0.0 0.0 1.054795031673908 0.0 18 0.0 0.0 0.0 1.1685972272893104 0.0 19 0.0 0.0 0.0 1.2047347793881906 0.0 20 3.454832896642455E-5 0.0 0.0 1.2495439620576432 0.0 21 3.454832896642455E-5 0.0 0.0 1.302921130310769 0.0 22 3.454832896642455E-5 0.0 0.0 1.354812720418339 0.0 23 3.454832896642455E-5 0.0 0.0 1.4225619935214973 0.0 24 3.454832896642455E-5 0.0 0.0 1.4730371021414437 0.0 25 3.454832896642455E-5 0.0 0.0 1.5145987418880524 0.0 26 3.454832896642455E-5 0.0 0.0 1.5564022199374261 0.0 27 3.454832896642455E-5 0.0 0.0 1.6002095010668524 0.0 28 3.454832896642455E-5 0.0 0.0 1.6433258156169503 0.0 29 3.454832896642455E-5 0.0 0.0 1.6903806396692205 0.0 30 3.454832896642455E-5 0.0 0.0 1.754882369849535 0.0 31 3.454832896642455E-5 0.0 0.0 1.815894718804241 0.0 32 3.454832896642455E-5 0.0 0.0 1.8722084950195128 0.0 33 3.454832896642455E-5 0.0 0.0 1.9316316208417632 0.0 34 3.454832896642455E-5 0.0 0.0 1.9928858080992338 0.0 35 3.454832896642455E-5 0.0 0.0 2.081191336937415 0.0 36 3.454832896642455E-5 0.0 0.0 2.144414778945972 0.0 37 3.454832896642455E-5 0.0 0.0 2.212198600378097 0.0 38 3.454832896642455E-5 0.0 0.0 2.2735909809514334 0.0 39 3.454832896642455E-5 0.0 0.0 2.3378854211579494 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTA 30 2.1666492E-6 45.000004 26 TACGATG 30 2.1666492E-6 45.000004 1 TCCGTCG 30 2.1666492E-6 45.000004 33 CGAACTA 20 7.0350646E-4 45.0 16 ACGTTCC 20 7.0350646E-4 45.0 33 TAGACGT 25 3.8922797E-5 45.0 21 TACGCAT 20 7.0350646E-4 45.0 45 ATCGGGT 35 1.212793E-7 45.0 12 CGTCCTA 25 3.8922797E-5 45.0 41 TCGAATC 20 7.0350646E-4 45.0 43 AATCGTC 20 7.0350646E-4 45.0 21 CCCGATA 25 3.8922797E-5 45.0 40 TCGTAAG 120 0.0 43.125004 1 CGTTTTT 13675 0.0 42.992687 1 TCGTACA 175 0.0 42.42857 34 TATAGCG 85 0.0 42.35294 1 ATGACGG 405 0.0 42.222225 2 GTACGTA 160 0.0 42.1875 11 ACGGGAT 615 0.0 42.07317 5 CGTAAGG 510 0.0 41.911766 2 >>END_MODULE