SRR1545060_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545060_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2794222
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22614	0.8093129321864906	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3764	0.13470654801229107	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGTCTA	595	0.0	43.865547	31
CGTTTTT	17605	0.0	43.287422	1
TCACGAC	625	0.0	41.760002	25
CGACGGT	635	0.0	41.45669	28
CACGACG	650	0.0	40.5	26
ACGACGG	655	0.0	40.190838	27
TACGCGG	140	0.0	40.17857	2
CATATGC	2120	0.0	39.693398	33
ACGGGTA	230	0.0	39.130432	5
TCGTTAG	105	0.0	38.57143	1
ACGTATC	35	6.251501E-6	38.571426	45
CGTAAGG	310	0.0	38.46774	2
ACCCGCT	1550	0.0	38.322582	34
GCCAGTA	2225	0.0	38.224716	25
CTCACGA	685	0.0	38.102192	24
ACTAACC	710	0.0	38.02817	14
ATATGCT	2205	0.0	37.959183	34
ACGGTCT	690	0.0	37.826088	30
GGTACCT	2340	0.0	37.596157	8
CGAAAGG	515	0.0	37.572815	2