##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545060_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2794222 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.974765426655434 31.0 31.0 33.0 30.0 34.0 2 31.25712380762874 31.0 31.0 34.0 30.0 34.0 3 31.322239607303928 31.0 31.0 34.0 28.0 34.0 4 35.18139217284811 37.0 35.0 37.0 32.0 37.0 5 35.07158056875939 37.0 35.0 37.0 32.0 37.0 6 35.121162885411394 37.0 35.0 37.0 32.0 37.0 7 35.613166384059674 37.0 35.0 37.0 35.0 37.0 8 35.53670860797746 37.0 35.0 37.0 35.0 37.0 9 37.25896331787524 39.0 37.0 39.0 34.0 39.0 10 36.625759871620794 39.0 35.0 39.0 32.0 39.0 11 36.3438492002425 38.0 35.0 39.0 32.0 39.0 12 35.70099727222819 37.0 35.0 39.0 31.0 39.0 13 35.29625598825004 37.0 35.0 39.0 30.0 39.0 14 36.291254596091505 38.0 35.0 40.0 30.0 41.0 15 36.59733729102412 38.0 35.0 40.0 31.0 41.0 16 36.66643774188307 38.0 35.0 40.0 31.0 41.0 17 36.57292262390032 38.0 35.0 40.0 31.0 41.0 18 36.48329195031748 38.0 35.0 40.0 31.0 41.0 19 36.37992435819344 38.0 35.0 40.0 31.0 41.0 20 36.231124799675904 38.0 35.0 40.0 30.0 41.0 21 36.06776125876899 37.0 34.0 40.0 30.0 41.0 22 35.97281712047217 37.0 34.0 40.0 30.0 41.0 23 35.930380979034595 37.0 34.0 40.0 30.0 41.0 24 35.840446822049216 37.0 34.0 40.0 30.0 41.0 25 35.6985411323796 37.0 34.0 40.0 30.0 41.0 26 35.551937891835365 37.0 34.0 40.0 29.0 41.0 27 35.48696989716637 37.0 34.0 40.0 29.0 41.0 28 35.4817548498294 37.0 34.0 40.0 29.0 41.0 29 35.481208007094644 37.0 34.0 40.0 29.0 41.0 30 35.33125034446082 37.0 34.0 40.0 29.0 41.0 31 35.1473100562518 37.0 34.0 40.0 27.0 41.0 32 34.909260609930065 37.0 34.0 40.0 26.0 41.0 33 34.642952492679534 36.0 33.0 40.0 25.0 41.0 34 34.4305728034494 36.0 33.0 40.0 24.0 41.0 35 34.219758129454284 36.0 33.0 40.0 23.0 41.0 36 34.07167862825502 36.0 33.0 40.0 23.0 41.0 37 34.00897995935899 36.0 33.0 40.0 23.0 41.0 38 33.94295585676442 36.0 33.0 40.0 23.0 41.0 39 33.86349330869201 36.0 33.0 40.0 23.0 41.0 40 33.70580505056506 36.0 33.0 40.0 22.0 41.0 41 33.6352859579518 36.0 33.0 40.0 22.0 41.0 42 33.60679287472506 35.0 33.0 40.0 22.0 41.0 43 33.49236531671428 35.0 32.0 40.0 21.0 41.0 44 33.39428363243865 35.0 32.0 40.0 21.0 41.0 45 33.338902206052346 35.0 32.0 40.0 21.0 41.0 46 33.297843550011414 35.0 32.0 39.0 22.0 41.0 47 33.20036095915071 35.0 32.0 39.0 21.0 41.0 48 33.14717227192399 35.0 32.0 39.0 20.0 41.0 49 33.156673306559036 35.0 32.0 39.0 20.0 41.0 50 33.08863182667662 35.0 32.0 39.0 20.0 41.0 51 32.89045966999043 35.0 31.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 2.0 12 6.0 13 14.0 14 58.0 15 123.0 16 347.0 17 952.0 18 2138.0 19 4169.0 20 7225.0 21 11164.0 22 16379.0 23 23489.0 24 33012.0 25 46094.0 26 58842.0 27 67506.0 28 72253.0 29 78573.0 30 90723.0 31 108912.0 32 132496.0 33 166840.0 34 259340.0 35 329693.0 36 219193.0 37 265675.0 38 351855.0 39 447008.0 40 138.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.40166887240885 22.52015051058935 26.200137283293884 16.878043333707915 2 35.364441336443555 24.444943887779853 27.793926180525386 12.3966885952512 3 29.04715516519446 24.374691774669298 32.989039525134366 13.58911353500187 4 25.863406701400248 27.218417147957464 31.95451184623126 14.963664304411031 5 22.670245957550975 30.744371778620312 32.072970580004025 14.512411683824691 6 20.82046451570419 39.26481145735736 29.875686326999073 10.039037699939374 7 83.91570175884378 4.372487225424465 9.857233963514709 1.8545770522170393 8 85.06582512055235 3.451300576690041 9.729434525961073 1.7534397767965466 9 80.6617727582132 4.983999123906404 11.407325545357526 2.94690257252287 10 45.097562040525055 24.37036141008123 18.182914600199986 12.349161949193729 11 39.00609901432313 22.64311854963564 24.218082886757028 14.132699549284203 12 34.475106129720544 21.99449435298985 28.511406752935166 15.018992764354444 13 22.726683849744223 31.78115411016018 28.8556886317551 16.636473408340496 14 17.767163811608384 35.025384525638984 31.676402232893448 15.531049429859186 15 17.09760355476408 23.28004002545252 43.23733046264756 16.38502595713583 16 19.515128003429936 19.3067694692834 42.126287746642895 19.051814780643774 17 19.51451960509938 19.26536259466857 31.90737886968179 29.312738930550257 18 22.232628617196486 22.540048714812208 34.89561674054531 20.331705927445995 19 28.235193910863206 23.574504817441134 28.346244500258035 19.844056771437632 20 29.133046694213988 23.153206867600357 27.833185766914724 19.88056067127093 21 24.030624624671912 25.89908747408044 30.95698910108073 19.113298800166916 22 23.434644777687673 22.593802496723598 29.493039565217078 24.478513160371655 23 20.60072535396257 27.148308187395276 28.648296377310032 23.602670081332118 24 20.834600829855322 23.48449765265609 37.01248504950573 18.66841646798286 25 20.944398834451952 23.461450092369184 34.77816007461111 20.81599099856776 26 18.384795481532965 29.337039075635364 30.345226685639147 21.93293875719252 27 19.269442442296995 29.046833071960638 31.167530711589848 20.51619377415252 28 17.981248447689556 26.899795363432112 36.636423304948565 18.482532883929768 29 19.212861397555383 24.245747116728737 35.897720367243544 20.643671118472334 30 20.320504240536362 26.47835426104297 34.092244639116004 19.108896859304664 31 27.3235626947322 25.28897131294507 28.03542452961862 19.352041462704108 32 28.10485351557607 24.926902729990672 29.009541833111328 17.95870192132193 33 26.77768623967602 25.63507838675667 27.45157686110839 20.135658512458924 34 21.12265954530456 27.57440174760631 29.320540744436197 21.98239796265293 35 20.728524791516207 25.978107680778407 31.45229691842667 21.841070609278717 36 27.890912032043268 25.669757091598306 26.86715658240469 19.572174293953736 37 22.08228265327522 30.525849413539795 28.35887771265132 19.03299022053366 38 22.517072730799487 31.135357176344613 25.411939351991357 20.935630740864543 39 21.734099867512317 28.966023458408102 27.057263166634577 22.242613507445004 40 23.92261602692986 25.810833928012876 27.62794080069515 22.638609244362115 41 20.005425481583067 24.903783593429583 29.13605289772967 25.95473802725768 42 22.558157512180493 26.587830172405774 25.655942870681 25.19806944473274 43 22.05250692321512 26.37617912964682 27.131451974825193 24.439861972312865 44 20.88302217934008 27.838231894244625 29.451203232957152 21.827542693458142 45 20.03520121164317 32.50575652185116 26.393751104958735 21.065291161546934 46 22.235634820712168 30.011860188632113 27.238744809825416 20.5137601808303 47 22.002224590601603 28.15735471268926 27.914460626249454 21.925960070459684 48 22.93847804505154 26.459708641618313 29.859474300896636 20.742339012433515 49 22.09827995055511 25.990776681308787 30.72404411675236 21.186899251383746 50 20.81452368494701 29.995397645570037 28.43485592769651 20.755222741786444 51 19.966273259605 31.40605864530449 27.273924548586333 21.353743546504177 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1786.0 1 3488.0 2 5190.0 3 23623.0 4 42056.0 5 30706.5 6 19357.0 7 19493.0 8 19629.0 9 20038.0 10 20447.0 11 20199.0 12 19951.0 13 19580.0 14 19209.0 15 17836.0 16 16463.0 17 15695.5 18 14928.0 19 14327.5 20 13727.0 21 14017.0 22 14307.0 23 15457.0 24 16607.0 25 16301.5 26 19826.0 27 23656.0 28 26664.0 29 29672.0 30 34727.5 31 39783.0 32 45341.0 33 50899.0 34 60775.0 35 70651.0 36 77718.5 37 84786.0 38 98258.5 39 111731.0 40 136797.5 41 161864.0 42 186157.0 43 210450.0 44 219154.0 45 227858.0 46 221725.0 47 215592.0 48 211194.0 49 206796.0 50 197812.0 51 188828.0 52 179289.0 53 169750.0 54 161507.5 55 153265.0 56 149178.0 57 145091.0 58 137434.5 59 129778.0 60 117565.0 61 105352.0 62 92736.0 63 80120.0 64 68867.5 65 57615.0 66 46009.5 67 34404.0 68 27636.0 69 20868.0 70 17698.0 71 14528.0 72 11886.5 73 9245.0 74 7737.0 75 4455.0 76 2681.0 77 2022.5 78 1364.0 79 1147.0 80 930.0 81 658.5 82 387.0 83 299.5 84 212.0 85 158.0 86 104.0 87 74.5 88 45.0 89 31.5 90 18.0 91 15.0 92 12.0 93 7.5 94 3.0 95 2.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2794222.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.643629967202614 #Duplication Level Percentage of deduplicated Percentage of total 1 78.69167935195065 14.670985513355264 2 6.190924718165354 2.3084261920056597 3 2.5097396772066505 1.4037197356754196 4 1.4527652096122472 1.083392679889451 5 1.0315749826155425 0.9616151129653823 6 0.7254510292692007 0.8115024329412751 7 0.6031332419949486 0.7871215089271163 8 0.5036494789422509 0.7511883614858984 9 0.4363355848647394 0.732139126716702 >10 5.312267929973659 22.90781589822963 >50 1.4022096657418184 18.612514442170408 >100 1.1317539014881675 32.69624686757232 >500 0.005805837391896438 0.7425393241320641 >1k 0.0025158628698217903 0.7148654824600869 >5k 0.0 0.0 >10k+ 1.9352791306321464E-4 0.8159273214733965 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22614 0.8093129321864906 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3764 0.13470654801229107 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.008624941039044142 0.0 2 0.0 0.0 0.0 0.028666297810267045 0.0 3 0.0 0.0 0.0 0.04562987479162357 0.0 4 0.0 0.0 0.0 0.06423970607918769 0.0 5 0.0 0.0 0.0 0.10697074176640224 0.0 6 0.0 0.0 0.0 0.17056626137794348 0.0 7 0.0 0.0 0.0 0.21250995804914571 0.0 8 0.0 0.0 0.0 0.32270163215378017 0.0 9 0.0 0.0 0.0 0.37831639719392374 0.0 10 0.0 0.0 0.0 0.4597701972141083 0.0 11 3.578813709146947E-5 0.0 0.0 0.5256919457365951 0.0 12 3.578813709146947E-5 0.0 0.0 0.5843844905666049 0.0 13 3.578813709146947E-5 0.0 0.0 0.608326754280798 0.0 14 7.157627418293893E-5 0.0 0.0 0.6207810259886294 0.0 15 7.157627418293893E-5 0.0 0.0 0.6328774163255461 0.0 16 7.157627418293893E-5 0.0 0.0 0.6661245956835212 0.0 17 7.157627418293893E-5 0.0 0.0 0.7030579531619177 0.0 18 7.157627418293893E-5 0.0 0.0 0.761249464072647 0.0 19 7.157627418293893E-5 0.0 0.0 0.786480100722133 0.0 20 7.157627418293893E-5 0.0 0.0 0.8147527290243939 0.0 21 7.157627418293893E-5 0.0 0.0 0.8488588236725643 0.0 22 7.157627418293893E-5 0.0 0.0 0.8860426981106011 0.0 23 7.157627418293893E-5 0.0 0.0 0.9312789033942185 0.0 24 7.157627418293893E-5 0.0 0.0 0.9684627778322553 0.0 25 7.157627418293893E-5 0.0 0.0 0.997486957013437 0.0 26 7.157627418293893E-5 0.0 0.0 1.0288015769684729 0.0 27 7.157627418293893E-5 0.0 0.0 1.0621203326006308 0.0 28 7.157627418293893E-5 0.0 0.0 1.0991610544903019 0.0 29 1.0736441127440841E-4 0.0 0.0 1.1398521663633026 0.0 30 1.0736441127440841E-4 0.0 0.0 1.1927828211215858 0.0 31 1.4315254836587787E-4 0.0 0.0 1.2397010688485024 0.0 32 1.4315254836587787E-4 0.0 0.0 1.2844720283499307 0.0 33 1.4315254836587787E-4 0.0 0.0 1.3340385982216159 0.0 34 1.4315254836587787E-4 0.0 0.0 1.3834620155449353 0.0 35 1.4315254836587787E-4 0.0 0.0 1.4453039164389945 0.0 36 1.7894068545734734E-4 0.0 0.0 1.4973756559070825 0.0 37 1.7894068545734734E-4 0.0 0.0 1.5528114802617687 0.0 38 1.7894068545734734E-4 0.0 0.0 1.6220973136708536 0.0 39 1.7894068545734734E-4 0.0 0.0 1.7198347160676568 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCTA 595 0.0 43.865547 31 CGTTTTT 17605 0.0 43.287422 1 TCACGAC 625 0.0 41.760002 25 CGACGGT 635 0.0 41.45669 28 CACGACG 650 0.0 40.5 26 ACGACGG 655 0.0 40.190838 27 TACGCGG 140 0.0 40.17857 2 CATATGC 2120 0.0 39.693398 33 ACGGGTA 230 0.0 39.130432 5 TCGTTAG 105 0.0 38.57143 1 ACGTATC 35 6.251501E-6 38.571426 45 CGTAAGG 310 0.0 38.46774 2 ACCCGCT 1550 0.0 38.322582 34 GCCAGTA 2225 0.0 38.224716 25 CTCACGA 685 0.0 38.102192 24 ACTAACC 710 0.0 38.02817 14 ATATGCT 2205 0.0 37.959183 34 ACGGTCT 690 0.0 37.826088 30 GGTACCT 2340 0.0 37.596157 8 CGAAAGG 515 0.0 37.572815 2 >>END_MODULE