SRR1545059_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545059_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2242113
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	10276	0.45831766730757995	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9207	0.41063942807521303	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGCGT	30	2.166429E-6	45.000004	40
ATATCCG	45	3.8562575E-10	45.000004	1
CACTACG	30	2.166429E-6	45.000004	1
ACTCGGT	30	2.166429E-6	45.000004	40
ACGTATA	60	0.0	45.000004	13
CGGTCTA	300	0.0	45.000004	31
TACCGTA	30	2.166429E-6	45.000004	38
CTCCGTA	25	3.891997E-5	45.0	22
GTCGACA	40	6.8193913E-9	45.0	30
ATCGTCC	20	7.034725E-4	45.0	25
ATGTACG	95	0.0	45.0	1
CCGTATT	25	3.891997E-5	45.0	24
TCCGTCA	35	1.2126111E-7	45.0	29
CCGAATA	20	7.034725E-4	45.0	45
GGTTCAC	25	3.891997E-5	45.0	8
TTCGATC	40	6.8193913E-9	45.0	14
TGCGTAT	50	2.1827873E-11	45.0	13
CGTACAG	55	1.8189894E-12	44.999996	11
TGTACGT	55	1.8189894E-12	44.999996	10
TAGTGCG	190	0.0	43.81579	1