##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545059_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2242113 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.93972070096378 31.0 31.0 33.0 28.0 34.0 2 31.220678440381906 31.0 31.0 34.0 28.0 34.0 3 31.299313192510816 31.0 31.0 34.0 28.0 34.0 4 35.11630412918528 35.0 35.0 37.0 32.0 37.0 5 34.970703528323504 35.0 35.0 37.0 32.0 37.0 6 35.035532107436154 37.0 35.0 37.0 32.0 37.0 7 35.58888601957172 37.0 35.0 37.0 35.0 37.0 8 35.536265121338666 37.0 35.0 37.0 35.0 37.0 9 37.280982269849915 39.0 37.0 39.0 35.0 39.0 10 36.66185914804473 39.0 35.0 39.0 32.0 39.0 11 36.26576626601781 38.0 35.0 39.0 32.0 39.0 12 34.87363348769665 35.0 34.0 39.0 30.0 39.0 13 34.126615384684 35.0 33.0 39.0 25.0 39.0 14 34.962916231251505 36.0 33.0 40.0 25.0 41.0 15 35.544670139283795 36.0 33.0 40.0 30.0 41.0 16 35.79567176141435 36.0 34.0 40.0 31.0 41.0 17 35.743851893281025 36.0 34.0 40.0 31.0 41.0 18 35.704790525722835 36.0 34.0 40.0 30.0 41.0 19 35.55622843273287 36.0 34.0 40.0 30.0 41.0 20 35.38266358564444 35.0 34.0 40.0 30.0 41.0 21 35.131515672938875 35.0 34.0 40.0 29.0 41.0 22 35.011369632128265 35.0 34.0 40.0 29.0 41.0 23 35.04443130207978 35.0 34.0 39.0 29.0 41.0 24 34.94464507364258 35.0 34.0 39.0 29.0 41.0 25 34.83181043952736 35.0 34.0 39.0 29.0 41.0 26 34.65866974590487 35.0 34.0 39.0 29.0 41.0 27 34.534140785946114 35.0 33.0 39.0 27.0 41.0 28 34.636247147222285 35.0 34.0 39.0 27.0 41.0 29 34.740623688458165 35.0 34.0 39.0 29.0 41.0 30 34.66303393272328 35.0 34.0 39.0 29.0 41.0 31 34.39864226290111 35.0 33.0 39.0 27.0 41.0 32 34.10129864105868 35.0 33.0 39.0 25.0 41.0 33 33.853115342536256 35.0 33.0 39.0 24.0 41.0 34 33.69295749143777 35.0 33.0 39.0 23.0 41.0 35 33.49426946813118 35.0 33.0 39.0 23.0 41.0 36 33.24222061956735 35.0 33.0 39.0 22.0 41.0 37 33.133530290400174 35.0 32.0 39.0 22.0 41.0 38 33.17201184775254 35.0 32.0 39.0 23.0 41.0 39 33.1840843882534 35.0 32.0 39.0 23.0 41.0 40 32.90216193385436 35.0 32.0 39.0 21.0 41.0 41 32.98081318827374 35.0 32.0 38.0 22.0 41.0 42 32.968634943912285 35.0 32.0 38.0 22.0 41.0 43 32.82729059596907 35.0 32.0 38.0 22.0 40.0 44 32.78256002262152 35.0 32.0 38.0 22.0 40.0 45 32.75810229011651 35.0 32.0 38.0 22.0 40.0 46 32.731120599184784 35.0 32.0 38.0 22.0 40.0 47 32.65317537519295 35.0 32.0 38.0 22.0 40.0 48 32.67662066987703 35.0 32.0 38.0 22.0 40.0 49 32.751185600368935 35.0 32.0 38.0 22.0 40.0 50 32.63418703696023 35.0 32.0 38.0 21.0 40.0 51 32.39261179075274 35.0 31.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 3.0 13 11.0 14 24.0 15 110.0 16 318.0 17 908.0 18 2087.0 19 3732.0 20 6596.0 21 10414.0 22 15200.0 23 21690.0 24 29929.0 25 41502.0 26 52148.0 27 59436.0 28 63702.0 29 69719.0 30 80975.0 31 98420.0 32 121553.0 33 157266.0 34 274383.0 35 372282.0 36 134073.0 37 154148.0 38 203580.0 39 267806.0 40 93.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.32911365305852 23.824579760252938 29.20178420980566 16.64452237688288 2 30.719950332565755 25.371468788593614 30.85290527283861 13.055675606002017 3 28.371317591932254 23.71802848473739 34.512488888829424 13.398165034500936 4 25.563653571430162 27.143814785427857 32.849414815399584 14.443116827742402 5 22.326305587630955 32.07603720240684 31.853925292793008 13.743731917169205 6 20.21994431145977 39.70651791412833 29.202096415301103 10.871441359110804 7 84.99879354876404 5.043991984346909 8.407337185949148 1.549877280939899 8 87.4352898359717 3.265803284669417 7.8925103239667225 1.406396555392168 9 84.68110215676018 4.197469083850814 8.86422762813471 2.257201131254312 10 59.271901104003234 18.52993136385187 13.209013105048676 8.989154427096226 11 55.73113397942031 16.36706089300584 18.037003487335383 9.864801640238472 12 48.64875231533826 19.657840617310544 21.68204724739565 10.011359819955551 13 20.145996209825284 47.2687594247034 21.880743744851397 10.704500620619923 14 12.70069795768545 49.05470866098185 27.724204801452917 10.520388579879784 15 10.563651341390912 20.816702815602962 57.255633413659346 11.364012429346781 16 12.254377901559824 14.558722062625746 55.08803525959664 18.09886477621779 17 13.057682641329851 14.547928672640495 30.687168755544437 41.707219930485216 18 20.600433608832383 21.349280790040467 37.993936969278536 20.056348631848618 19 30.6928776560325 21.363597642045697 27.968973909878763 19.97455079204304 20 33.411830715044246 19.749450629829987 25.383555601345698 21.455163053780073 21 20.84520271725823 26.880491750415793 30.867355927199032 21.40694960512695 22 21.650915899421662 23.171891871640725 26.317719044490623 28.859473184446994 23 17.066713408289413 30.305386035404997 25.180934234804404 27.446966321501193 24 18.32436634549641 21.298569697423815 44.41328336261375 15.963780594466023 25 14.930558807696134 22.107761740822163 41.565166430059506 21.3965130214222 26 13.867186890223643 35.89074234884683 30.20320563682562 20.038865124103914 27 15.205433446039518 37.32238294858466 29.832260907456494 17.639922697919328 28 12.763049855203551 28.91428754928944 43.03659093007355 15.286071665433454 29 13.01682832221213 23.201239188212192 42.88004217450235 20.901890315073327 30 16.479008863514018 30.521744443745696 35.11705253035864 17.882194162381644 31 30.470854947988794 25.38154856601786 26.610969206279968 17.536627279713375 32 32.14548062474996 26.01702055159575 27.785843086410004 14.051655737244287 33 30.723964403221427 26.776170514153392 24.20002916891343 18.299835913711753 34 19.17664274726564 28.523540071352336 28.244829765493535 24.054987415888498 35 19.563286952976945 25.916936389914337 32.0879010112336 22.431875645875117 36 33.69018421462255 23.140582120526485 26.161750099125246 17.00748356572572 37 19.467439865876518 33.93196507044917 29.64382259056524 16.956772473109073 38 20.740078666864694 33.469142723850226 23.44667730841398 22.344101300871095 39 20.81710422266853 32.67828160311278 27.205408469599885 19.299205704618814 40 23.41260230862584 24.939197979762838 26.414279744152058 25.23391996745927 41 16.042991588737944 24.395559010629704 27.90037790245184 31.661071498180508 42 23.473616182592046 24.726942843647933 23.77716912573095 28.022271848029067 43 23.70504965628405 25.52810674573494 25.544564435423194 25.22227916255782 44 18.332349886022694 32.547958109158635 28.503871125139547 20.615820879679127 45 15.506042737364261 41.74963527708015 21.74957283598106 20.99474914957453 46 22.249324632612183 34.514629726512446 25.55723105838109 17.678814582494283 47 23.42272668683514 27.95876033009933 25.440867610151674 23.177645372913855 48 24.396183421620588 24.17326869787562 30.998616037639493 20.431931842864298 49 22.24160869679628 23.275454894557054 33.12295143019107 21.35998497845559 50 19.57055688094222 35.867193134333554 25.10346267114994 19.458787313574295 51 17.954001426333107 36.70912215396815 23.515986928401915 21.82088949129683 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2236.0 1 2612.5 2 2989.0 3 10367.0 4 17745.0 5 14157.0 6 10569.0 7 11847.5 8 13126.0 9 14255.0 10 15384.0 11 15845.0 12 16306.0 13 15856.5 14 15407.0 15 14363.0 16 13319.0 17 12364.0 18 11409.0 19 10850.5 20 10292.0 21 10174.0 22 10056.0 23 9791.5 24 9527.0 25 9781.0 26 11510.5 27 12986.0 28 15388.0 29 17790.0 30 21750.5 31 25711.0 32 27654.0 33 29597.0 34 37615.0 35 45633.0 36 49455.5 37 53278.0 38 70719.0 39 88160.0 40 132005.5 41 175851.0 42 222539.0 43 269227.0 44 262991.5 45 256756.0 46 243816.5 47 230877.0 48 209998.5 49 189120.0 50 175491.0 51 161862.0 52 146556.5 53 131251.0 54 116358.0 55 101465.0 56 90711.0 57 79957.0 58 75523.5 59 71090.0 60 62538.0 61 53986.0 62 46233.0 63 38480.0 64 29724.5 65 20969.0 66 16612.5 67 12256.0 68 9730.5 69 7205.0 70 5536.5 71 3868.0 72 3379.5 73 2891.0 74 2373.0 75 1226.0 76 597.0 77 594.5 78 592.0 79 397.0 80 202.0 81 152.5 82 103.0 83 75.0 84 47.0 85 32.0 86 17.0 87 15.5 88 14.0 89 13.5 90 13.0 91 8.5 92 4.0 93 2.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2242113.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.179496670965214 #Duplication Level Percentage of deduplicated Percentage of total 1 83.06568434845079 12.608952790387558 2 6.712195688562415 2.037755042188005 3 2.3228525693622672 1.057791985313326 4 1.152125638018926 0.6995474914736786 5 0.6809033123837156 0.5167884781788898 6 0.4346312435985057 0.3958490109180593 7 0.3179190987676684 0.33780963309660583 8 0.24888399211899442 0.3022346983861447 9 0.19824882588893228 0.2708385653343429 >10 2.2130827344649564 7.901147069949317 >50 0.8169538177969007 8.966037206379363 >100 1.7986584636322849 60.18206877377107 >500 0.03549400026900674 3.4891012391613505 >1k 0.001774700013450337 0.3593220678798148 >5k 2.9578333557505617E-4 0.41337976745838495 >10k+ 2.9578333557505617E-4 0.4613761801240756 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 10276 0.45831766730757995 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9207 0.41063942807521303 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.012934227668275417 0.0 2 0.0 0.0 0.0 0.04089891990278813 0.0 3 0.0 0.0 0.0 0.05534957426320618 0.0 4 0.0 0.0 0.0 0.08478609240479851 0.0 5 0.0 0.0 0.0 0.12934227668275416 0.0 6 0.0 0.0 0.0 0.1874124988348045 0.0 7 0.0 0.0 0.0 0.22764240696164734 0.0 8 0.0 0.0 0.0 0.34900114311812114 0.0 9 0.0 0.0 0.0 0.40359250403525604 0.0 10 0.0 0.0 0.0 0.49127764746915076 0.0 11 0.0 0.0 0.0 0.5615684847284682 0.0 12 0.0 0.0 0.0 0.6360071949986463 0.0 13 0.0 0.0 0.0 0.6666479343369403 0.0 14 0.0 0.0 0.0 0.6773967235371277 0.0 15 0.0 0.0 0.0 0.6938544132253815 0.0 16 0.0 0.0 0.0 0.7323002899497036 0.0 17 0.0 0.0 0.0 0.7758752569562729 0.0 18 0.0 0.0 0.0 0.8624007799785292 0.0 19 0.0 0.0 0.0 0.8913020886993653 0.0 20 0.0 0.0 0.0 0.9276071277406625 0.0 21 0.0 0.0 0.0 0.9670788225214341 0.0 22 0.0 0.0 0.0 1.0032500592075422 0.0 23 0.0 0.0 0.0 1.0490104646821994 0.0 24 0.0 0.0 0.0 1.0838882786014798 0.0 25 0.0 0.0 0.0 1.1069468844790606 0.0 26 0.0 0.0 0.0 1.1356251892745817 0.0 27 0.0 0.0 0.0 1.165240110556426 0.0 28 0.0 0.0 0.0 1.1967728655959802 0.0 29 0.0 0.0 0.0 1.2329441022820884 0.0 30 0.0 0.0 0.0 1.2813805548605266 0.0 31 0.0 0.0 0.0 1.332047046692116 0.0 32 0.0 0.0 0.0 1.373347373660471 0.0 33 0.0 0.0 0.0 1.4150045069093307 0.0 34 0.0 0.0 0.0 1.461656928085248 0.0 35 0.0 0.0 0.0 1.5254360507253648 0.0 36 0.0 0.0 0.0 1.5769499574731514 0.0 37 0.0 4.4600785063018676E-5 0.0 1.628107057940434 0.0 38 0.0 4.4600785063018676E-5 0.0 1.676231305023431 0.0 39 0.0 4.4600785063018676E-5 0.0 1.725961180368697 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATGCGT 30 2.166429E-6 45.000004 40 ATATCCG 45 3.8562575E-10 45.000004 1 CACTACG 30 2.166429E-6 45.000004 1 ACTCGGT 30 2.166429E-6 45.000004 40 ACGTATA 60 0.0 45.000004 13 CGGTCTA 300 0.0 45.000004 31 TACCGTA 30 2.166429E-6 45.000004 38 CTCCGTA 25 3.891997E-5 45.0 22 GTCGACA 40 6.8193913E-9 45.0 30 ATCGTCC 20 7.034725E-4 45.0 25 ATGTACG 95 0.0 45.0 1 CCGTATT 25 3.891997E-5 45.0 24 TCCGTCA 35 1.2126111E-7 45.0 29 CCGAATA 20 7.034725E-4 45.0 45 GGTTCAC 25 3.891997E-5 45.0 8 TTCGATC 40 6.8193913E-9 45.0 14 TGCGTAT 50 2.1827873E-11 45.0 13 CGTACAG 55 1.8189894E-12 44.999996 11 TGTACGT 55 1.8189894E-12 44.999996 10 TAGTGCG 190 0.0 43.81579 1 >>END_MODULE