SRR1545058_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545058_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	563864
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2402	0.42598924563369894	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2169	0.3846672247208547	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCGAG	20	7.030225E-4	45.000004	1
CAGCGCG	40	6.8048394E-9	45.000004	1
AGTCCGG	20	7.030225E-4	45.000004	2
ACACGAA	20	7.030225E-4	45.000004	25
AATCATC	20	7.030225E-4	45.000004	19
CGTATGT	20	7.030225E-4	45.000004	40
TACCATC	20	7.030225E-4	45.000004	12
GTACAGT	20	7.030225E-4	45.000004	8
GGTCGCG	20	7.030225E-4	45.000004	28
CGACGGT	20	7.030225E-4	45.000004	28
TTAGCGA	20	7.030225E-4	45.000004	2
TCCGACA	20	7.030225E-4	45.000004	17
TTAGACT	20	7.030225E-4	45.000004	17
GGCGTAA	20	7.030225E-4	45.000004	45
GACCGAC	20	7.030225E-4	45.000004	9
GGTCCGT	20	7.030225E-4	45.000004	9
CCAATCG	20	7.030225E-4	45.000004	32
CGACCTT	20	7.030225E-4	45.000004	20
TAAACGG	20	7.030225E-4	45.000004	2
GGATCGA	40	6.8048394E-9	45.000004	8