##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545058_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 563864 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.98539186754253 31.0 31.0 33.0 30.0 34.0 2 31.26197274520097 31.0 31.0 34.0 28.0 34.0 3 31.36128037966602 31.0 31.0 34.0 28.0 34.0 4 35.15183803186584 37.0 35.0 37.0 32.0 37.0 5 35.00356291588042 35.0 35.0 37.0 32.0 37.0 6 35.05508775165643 37.0 35.0 37.0 32.0 37.0 7 35.61318509427805 37.0 35.0 37.0 35.0 37.0 8 35.57157577004384 37.0 35.0 37.0 35.0 37.0 9 37.33104613878524 39.0 37.0 39.0 35.0 39.0 10 36.74439935871061 39.0 37.0 39.0 32.0 39.0 11 36.31131797738462 38.0 35.0 39.0 32.0 39.0 12 34.74508746790006 35.0 33.0 39.0 30.0 39.0 13 33.87663869301817 35.0 33.0 39.0 24.0 39.0 14 34.68495062639218 35.0 33.0 40.0 25.0 41.0 15 35.33864548898316 35.0 33.0 40.0 30.0 41.0 16 35.65609969779947 35.0 34.0 40.0 31.0 41.0 17 35.62033930167558 35.0 34.0 40.0 31.0 41.0 18 35.563412454066935 36.0 34.0 39.0 30.0 41.0 19 35.45155924123547 36.0 34.0 39.0 30.0 41.0 20 35.2616162762652 35.0 34.0 39.0 30.0 41.0 21 34.9771647063831 35.0 34.0 39.0 29.0 41.0 22 34.847855156562574 35.0 33.0 39.0 29.0 41.0 23 34.92962487408311 35.0 34.0 39.0 29.0 41.0 24 34.8277421505895 35.0 34.0 39.0 29.0 41.0 25 34.74689286778372 35.0 34.0 39.0 29.0 41.0 26 34.585754720996555 35.0 34.0 39.0 29.0 41.0 27 34.42824156179504 35.0 33.0 39.0 27.0 41.0 28 34.55930685413504 35.0 34.0 39.0 29.0 41.0 29 34.69271490997829 35.0 34.0 39.0 29.0 41.0 30 34.641303576749 35.0 34.0 39.0 29.0 41.0 31 34.35895003050381 35.0 33.0 39.0 27.0 41.0 32 34.03499957436545 35.0 33.0 39.0 26.0 41.0 33 33.75029085027595 35.0 33.0 39.0 24.0 41.0 34 33.653950243321084 35.0 33.0 39.0 23.0 41.0 35 33.47586652100507 35.0 33.0 39.0 23.0 41.0 36 33.2063352155839 35.0 33.0 38.0 22.0 41.0 37 33.14681554417377 35.0 32.0 38.0 23.0 41.0 38 33.2425141523488 35.0 32.0 38.0 23.0 41.0 39 33.25645368386703 35.0 32.0 38.0 23.0 41.0 40 32.971661606344796 35.0 32.0 38.0 23.0 41.0 41 33.02702779393613 35.0 32.0 38.0 23.0 41.0 42 33.036776598612434 35.0 32.0 38.0 23.0 40.0 43 32.85826724174623 35.0 32.0 38.0 23.0 40.0 44 32.835240412581754 35.0 32.0 38.0 23.0 40.0 45 32.790761602088445 35.0 32.0 38.0 23.0 40.0 46 32.762967665962 35.0 32.0 38.0 23.0 40.0 47 32.68210596881517 35.0 32.0 38.0 23.0 40.0 48 32.77338507157754 35.0 32.0 38.0 23.0 40.0 49 32.856756239093116 35.0 32.0 38.0 23.0 40.0 50 32.72937445908943 35.0 32.0 37.0 23.0 40.0 51 32.491568888951946 35.0 32.0 37.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 1.0 12 1.0 13 2.0 14 7.0 15 28.0 16 76.0 17 224.0 18 487.0 19 946.0 20 1571.0 21 2535.0 22 3652.0 23 5245.0 24 7276.0 25 10185.0 26 13033.0 27 14561.0 28 15614.0 29 17410.0 30 20490.0 31 24908.0 32 30725.0 33 40243.0 34 72556.0 35 102219.0 36 31535.0 37 35379.0 38 47860.0 39 65069.0 40 24.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.34904870678036 23.491834910545805 29.5594327710228 15.599683611651036 2 29.84443057191096 26.176524835776004 30.709000751954374 13.270043840358667 3 28.432742647163145 24.50519983542131 33.45611707787693 13.60594043953861 4 25.632776697927163 27.052445270490754 31.9906927911695 15.324085240412582 5 23.22687740306173 31.823808577954964 31.04791226253139 13.90140175645191 6 20.455287090504093 40.07455698537236 29.218215739965665 10.251940184157881 7 85.98828795596101 4.857731651603933 7.651490430316531 1.502489962118525 8 88.56373167997957 3.2566363520281487 7.017826993743172 1.1618049742491097 9 85.75649447384475 3.5783451328689186 8.46959550529915 2.195564887987174 10 64.63349318275328 16.675474937218905 11.963700466779223 6.727331413248584 11 61.4204843721181 15.373033213682733 15.547898074713052 7.658584339486117 12 53.86156945646468 19.253933572634534 17.911056566831718 8.973440404069066 13 20.493062156832146 51.74350552615524 17.53756224905296 10.225870067959649 14 11.868996779365236 53.357724557694766 25.100910857937375 9.672367805002624 15 9.563298951520224 20.238745513102447 59.85521331384873 10.342742221528596 16 10.779372330916676 13.478072726756807 58.571925145070445 17.170629797256076 17 12.149206191563923 13.198040662287362 29.004157030773374 45.64859611537534 18 20.078600513599024 20.70836230012911 38.79321964161571 20.41981754465616 19 33.55348098122952 20.21285274463346 26.517741866833138 19.715924407303888 20 37.13200346182767 19.044131208944002 23.613495452804223 20.210369876424103 21 20.82310628094718 29.964494984606215 28.467502802094124 20.744895932352485 22 21.605387114623383 24.236872721081678 24.173736929472355 29.98400323482258 23 17.221883291006343 32.75683498148489 22.978413234396946 27.042868493111815 24 18.163599733269013 21.10562121362598 45.88375920434714 14.847019848757856 25 13.348254188953366 21.54650766851581 44.034022388377345 21.07121575415348 26 12.820999389923813 38.970567370855385 29.464551735879574 18.743881503341232 27 15.316991331242994 39.62338436218663 29.929202786487526 15.130421520082857 28 11.5621852077806 29.295894045372645 45.36359831448718 13.778322432359577 29 12.197090078458634 21.796035923556033 45.051998354213076 20.954875643772258 30 15.77845012272463 32.89303803754097 34.013698338606474 17.314813501127933 31 32.89215129889477 25.873082871046922 24.182781663663576 17.051984166394735 32 34.8412028432388 25.406126299958853 26.250833534327427 13.501837322474925 33 32.73041016982818 27.37575018089468 23.875438048891223 16.01840160038591 34 19.261559524991842 27.250720031780713 27.908857454989146 25.5788629882383 35 18.51581232353901 24.702587858065066 34.08038108480059 22.701218733595336 36 35.35409247619993 22.10426627697459 26.234162847778897 16.30747839904658 37 19.13830285317027 35.42201665649873 29.3636408779422 16.076039612388804 38 19.426847608643218 36.00460394705106 21.943943929741923 22.624604514563796 39 19.762389512364685 34.42922406821503 27.307826000595885 18.500560418824396 40 25.83601719563583 24.981378488429833 24.868407984904163 24.31419633103018 41 14.853227019281245 23.83411602797838 27.62811599960274 33.684540953137635 42 23.564370131804832 23.75005320431877 21.885064483634352 30.800512180242045 43 23.06886057630918 25.723756083027112 22.973270150248997 28.23411319041471 44 18.668686066143607 32.122994197182294 28.615765503738487 20.5925542329356 45 15.13414582239689 44.05370798632294 19.672828909098648 21.13931728218152 46 21.652029567413418 37.224756324220024 24.14411985868933 16.979094249677225 47 21.44914376516323 28.568945703219217 24.11184257196771 25.870067959649845 48 24.635905111870947 21.495076827036307 32.23153100747698 21.637487053615764 49 21.086290311138857 21.549522579912885 35.39984819034377 21.964338918604486 50 18.327823730544953 38.06715803810848 24.35605039513074 19.248967836215826 51 16.651710341500785 39.915653419973616 20.706056779648993 22.726579458876607 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 450.0 1 581.0 2 712.0 3 2347.5 4 3983.0 5 3127.0 6 2271.0 7 2547.5 8 2824.0 9 3202.5 10 3581.0 11 3582.0 12 3583.0 13 3554.0 14 3525.0 15 3306.5 16 3088.0 17 2850.5 18 2613.0 19 2500.0 20 2387.0 21 2192.0 22 1997.0 23 2008.5 24 2020.0 25 2006.5 26 2290.5 27 2588.0 28 3375.0 29 4162.0 30 4068.0 31 3974.0 32 5844.0 33 7714.0 34 9335.5 35 10957.0 36 11868.5 37 12780.0 38 16985.0 39 21190.0 40 32669.0 41 44148.0 42 58250.0 43 72352.0 44 73051.0 45 73750.0 46 68316.5 47 62883.0 48 53751.0 49 44619.0 50 41461.5 51 38304.0 52 35660.5 53 33017.0 54 28985.5 55 24954.0 56 22690.0 57 20426.0 58 18715.5 59 17005.0 60 15235.0 61 13465.0 62 11662.5 63 9860.0 64 7240.0 65 4620.0 66 3576.5 67 2533.0 68 1950.5 69 1368.0 70 1111.5 71 855.0 72 732.0 73 609.0 74 458.0 75 247.5 76 188.0 77 160.0 78 132.0 79 92.5 80 53.0 81 33.0 82 13.0 83 11.0 84 9.0 85 4.5 86 0.0 87 0.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 563864.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.942805558331237 #Duplication Level Percentage of deduplicated Percentage of total 1 79.44872881551434 14.255330929933619 2 5.664478153566015 2.032732601977003 3 1.9520715670054354 1.0507692168817646 4 1.0707475227736674 0.7684885841277104 5 0.7428114264950051 0.6664060496053267 6 0.6358378213673507 0.6845228637256394 7 0.4908747570566786 0.6165369223552748 8 0.40589643648678936 0.5826336669361605 9 0.3919000075054977 0.6328607069681728 >10 5.723539650289639 25.544216987171893 >50 2.660321224352687 34.084787032157784 >100 0.8107931277527354 18.260758006334328 >500 0.0 0.0 >1k 0.0019994898341621097 0.8199564318253227 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2402 0.42598924563369894 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2169 0.3846672247208547 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01471986152689301 0.0 2 0.0 0.0 0.0 0.045046323226877405 0.0 3 0.0 0.0 0.0 0.06242640069236553 0.0 4 0.0 0.0 0.0 0.09594512151866408 0.0 5 0.0 0.0 0.0 0.15961295631570732 0.0 6 0.0 0.0 0.0 0.22026587971567613 0.0 7 0.0 0.0 0.0 0.2559127732928508 0.0 8 0.0 0.0 0.0 0.363208149482854 0.0 9 0.0 0.0 0.0 0.40931855908516945 0.0 10 0.0 0.0 0.0 0.4804349985102791 0.0 11 0.0 0.0 0.0 0.5460536583289588 0.0 12 0.0 0.0 0.0 0.6111402749599194 0.0 13 0.0 0.0 0.0 0.6414667366599038 0.0 14 0.0 0.0 0.0 0.6499794276634082 0.0 15 0.0 0.0 0.0 0.6664727664826979 0.0 16 0.0 0.0 0.0 0.7028290509768312 0.0 17 0.0 0.0 0.0 0.7475206787452293 0.0 18 0.0 0.0 0.0 0.8347757615311494 0.0 19 0.0 0.0 0.0 0.8596044436247038 0.0 20 0.0 0.0 0.0 0.8878027325738121 0.0 21 0.0 0.0 0.0 0.9246910602556645 0.0 22 0.0 0.0 0.0 0.9599832583743598 0.0 23 0.0 0.0 0.0 1.0044975384135182 0.0 24 0.0 0.0 0.0 1.0387256501567754 0.0 25 0.0 0.0 0.0 1.064086375438049 0.0 26 0.0 0.0 0.0 1.0910432302824795 0.0 27 0.0 0.0 0.0 1.116935998751472 0.0 28 0.0 0.0 0.0 1.1465530695344976 0.0 29 0.0 0.0 0.0 1.1724458380034901 0.0 30 0.0 0.0 0.0 1.2213938112736404 0.0 31 0.0 0.0 0.0 1.2687456549806335 0.0 32 0.0 0.0 0.0 1.3031511144531305 0.0 33 0.0 0.0 0.0 1.342167614885859 0.0 34 0.0 0.0 0.0 1.3817161585063065 0.0 35 0.0 0.0 0.0 1.4434331682817134 0.0 36 0.0 0.0 0.0 1.4895435778840287 0.0 37 0.0 0.0 0.0 1.5381368556956996 0.0 38 0.0 0.0 0.0 1.582651135734858 0.0 39 0.0 0.0 0.0 1.6321311521927273 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAG 20 7.030225E-4 45.000004 1 CAGCGCG 40 6.8048394E-9 45.000004 1 AGTCCGG 20 7.030225E-4 45.000004 2 ACACGAA 20 7.030225E-4 45.000004 25 AATCATC 20 7.030225E-4 45.000004 19 CGTATGT 20 7.030225E-4 45.000004 40 TACCATC 20 7.030225E-4 45.000004 12 GTACAGT 20 7.030225E-4 45.000004 8 GGTCGCG 20 7.030225E-4 45.000004 28 CGACGGT 20 7.030225E-4 45.000004 28 TTAGCGA 20 7.030225E-4 45.000004 2 TCCGACA 20 7.030225E-4 45.000004 17 TTAGACT 20 7.030225E-4 45.000004 17 GGCGTAA 20 7.030225E-4 45.000004 45 GACCGAC 20 7.030225E-4 45.000004 9 GGTCCGT 20 7.030225E-4 45.000004 9 CCAATCG 20 7.030225E-4 45.000004 32 CGACCTT 20 7.030225E-4 45.000004 20 TAAACGG 20 7.030225E-4 45.000004 2 GGATCGA 40 6.8048394E-9 45.000004 8 >>END_MODULE