##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545057_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3470100 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.923814587475864 31.0 31.0 33.0 30.0 34.0 2 31.203513155240483 31.0 31.0 34.0 28.0 34.0 3 31.298413878562577 31.0 31.0 34.0 28.0 34.0 4 35.13832973113167 35.0 35.0 37.0 32.0 37.0 5 35.01558859975217 35.0 35.0 37.0 32.0 37.0 6 35.07873288954209 37.0 35.0 37.0 32.0 37.0 7 35.58526353707386 37.0 35.0 37.0 35.0 37.0 8 35.51066626322008 37.0 35.0 37.0 35.0 37.0 9 37.24232327598628 39.0 37.0 39.0 34.0 39.0 10 36.57188063744561 39.0 35.0 39.0 32.0 39.0 11 36.279303478285925 38.0 35.0 39.0 32.0 39.0 12 35.46561626466096 37.0 35.0 39.0 30.0 39.0 13 34.98505374484885 37.0 34.0 39.0 29.0 39.0 14 35.97854442235094 38.0 34.0 40.0 29.0 41.0 15 36.32868591683237 38.0 35.0 40.0 30.0 41.0 16 36.41749488487363 38.0 35.0 40.0 31.0 41.0 17 36.288976398374686 38.0 34.0 40.0 31.0 41.0 18 36.254911674015155 38.0 35.0 40.0 30.0 41.0 19 36.183950894786896 37.0 35.0 40.0 30.0 41.0 20 36.05774041093917 37.0 34.0 40.0 30.0 41.0 21 35.88519552750641 37.0 34.0 40.0 30.0 41.0 22 35.76692141436846 37.0 34.0 40.0 30.0 41.0 23 35.74239560819573 37.0 34.0 40.0 30.0 41.0 24 35.6567822252961 36.0 34.0 40.0 30.0 41.0 25 35.5298665744503 36.0 34.0 40.0 29.0 41.0 26 35.38060113541397 36.0 34.0 40.0 29.0 41.0 27 35.30418892827296 36.0 34.0 40.0 29.0 41.0 28 35.3327497766635 36.0 34.0 40.0 29.0 41.0 29 35.34992305697242 36.0 34.0 40.0 29.0 41.0 30 35.23129938618484 36.0 34.0 40.0 29.0 41.0 31 35.06310480965966 36.0 34.0 40.0 27.0 41.0 32 34.855079104348576 36.0 34.0 40.0 27.0 41.0 33 34.60594709086193 36.0 33.0 40.0 25.0 41.0 34 34.41787383648886 36.0 33.0 40.0 24.0 41.0 35 34.26453790957033 36.0 33.0 40.0 24.0 41.0 36 34.0939163136509 36.0 33.0 40.0 23.0 41.0 37 34.05932941413792 36.0 33.0 40.0 23.0 41.0 38 34.05782225296101 35.0 33.0 40.0 23.0 41.0 39 34.009050747817064 36.0 33.0 40.0 23.0 41.0 40 33.80268724244258 35.0 33.0 40.0 23.0 41.0 41 33.77596726319126 35.0 33.0 40.0 23.0 41.0 42 33.74933517766058 35.0 33.0 40.0 23.0 41.0 43 33.630925621740005 35.0 32.0 40.0 23.0 41.0 44 33.555679663410274 35.0 32.0 40.0 23.0 41.0 45 33.499632575430105 35.0 32.0 39.0 23.0 41.0 46 33.42430391055013 35.0 32.0 39.0 23.0 41.0 47 33.353386069565715 35.0 32.0 39.0 23.0 41.0 48 33.34978646148526 35.0 32.0 39.0 23.0 41.0 49 33.35803319789055 35.0 32.0 39.0 23.0 41.0 50 33.27588081035129 35.0 32.0 39.0 23.0 41.0 51 33.10198466902971 35.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 6.0 12 3.0 13 9.0 14 47.0 15 141.0 16 419.0 17 1116.0 18 2514.0 19 4858.0 20 8185.0 21 13037.0 22 19858.0 23 27906.0 24 38988.0 25 53700.0 26 69749.0 27 80988.0 28 88571.0 29 99403.0 30 115535.0 31 139917.0 32 173234.0 33 218372.0 34 349817.0 35 442393.0 36 258639.0 37 314087.0 38 417839.0 39 530583.0 40 185.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.42736520561367 23.145183135932683 27.627503530157632 14.799948128296014 2 32.91951240598254 25.315091784098442 29.445549119621912 12.319846690297108 3 29.521224172214055 24.118094579406936 32.71946053427855 13.641220714100458 4 26.30195095242212 27.465231549523068 31.517276159188494 14.715541338866315 5 22.719546987118527 32.109132301662775 30.869917293449756 14.30140341776894 6 20.522319241520417 40.864787758277856 28.37212184086914 10.240771159332585 7 86.13547160024207 4.149909224518026 8.105069018183913 1.6095501570559927 8 87.06460908907523 3.43759545834414 7.91498804069047 1.5828074118901474 9 83.04616581654707 4.789227976139016 9.386386559465146 2.7782196478487653 10 47.912509725944496 24.885478804645402 15.947436673294717 11.254574796115385 11 43.24221203999885 21.54188640096827 21.53289530561079 13.683006253422093 12 39.31284401025907 20.84415434713697 25.743897870378373 14.099103772225586 13 22.81208034350595 35.45710498256535 25.096423734186335 16.63439093974237 14 16.905045964093254 37.42866199821331 29.35537880752716 16.31091323016628 15 16.830321892740844 22.370335148842972 45.38508976686551 15.414253191550674 16 19.396126912769084 17.959799429411255 43.34987464338204 19.294199014437623 17 17.889484452897612 18.716377049652746 30.596639866286274 32.79749863116337 18 22.393014610529956 23.07970951845768 33.876026627474715 20.65124924353765 19 28.377136105587734 24.751188726549668 26.571338001786692 20.300337166075906 20 31.70090199129708 22.352093599608082 26.19656494049163 19.750439468603208 21 23.3024984870753 27.164289213567333 29.15140774041094 20.381804558946428 22 22.985130111524164 23.470361084694964 27.527477594305637 26.017031209475235 23 21.484741073744274 27.468833751188726 26.981239733725253 24.06518544134175 24 21.161234546554855 23.05204460966543 37.62568802051814 18.16103282326158 25 20.455865825192358 23.699979827670674 34.307166940433994 21.536987406702977 26 18.176911328203797 30.57254834154635 28.473098757960862 22.777441572288986 27 18.285121466240167 31.54848563441976 29.13699893374831 21.02939396559177 28 16.9839197717645 28.76649087922538 35.942854672776 18.306734676234115 29 18.594997262326736 24.146018846719112 35.90599694533299 21.352986945621165 30 20.20215555747673 27.49961096222011 33.29927091438287 18.99896256592029 31 28.768335206478202 26.421659318175266 26.02553240540618 18.784473069940347 32 30.529149015878502 25.065934699288206 26.741678914152327 17.66323737068096 33 28.45926630356474 26.225958906083395 25.13679721045503 20.177977579896833 34 20.538111293622663 27.065415982248346 29.21333679144693 23.183135932682056 35 20.669778968905796 25.71724157805251 31.415953430736863 22.197026022304833 36 28.643036223739948 27.95247975562664 25.55450851560474 17.849975505028674 37 21.867294890637158 32.299904901876026 27.723869629117313 18.1089305783695 38 21.990893634189216 31.897985648828563 24.6459468026858 21.465173914296418 39 22.432869369758794 30.112561597648487 26.13996714792081 21.31460188467191 40 24.130976052563327 25.155643929569756 27.325725483415464 23.387654534451457 41 18.429036627186537 26.30120169447566 28.170830811792168 27.098930866545633 42 22.33560992478603 26.069767441860463 24.624506498371804 26.9701161349817 43 22.1283248321374 26.333448603786636 26.32137402380335 25.216852540272615 44 20.39944093830149 28.8015330970289 28.237514769026827 22.561511195642776 45 19.73176565516844 34.296014524077115 24.16985101293911 21.802368807815338 46 21.57372986369269 31.89472925852281 26.281576899801156 20.24996397798334 47 21.8478430016426 28.383043716319417 26.51309760525633 23.25601567678165 48 22.504884585458633 25.17051381804559 30.4766721420132 21.84792945448258 49 21.857266361199965 25.383792974265873 30.997752226160628 21.761188438373534 50 20.426788853347166 31.510302296763783 27.286764070199705 20.776144779689346 51 18.641018990807183 31.697213336791446 27.127806115097545 22.533961557303826 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1875.0 1 3988.5 2 6102.0 3 21280.0 4 36458.0 5 27612.5 6 18767.0 7 19100.0 8 19433.0 9 19846.5 10 20260.0 11 20204.5 12 20149.0 13 19335.5 14 18522.0 15 17612.5 16 16703.0 17 16281.0 18 15859.0 19 14578.5 20 13298.0 21 14215.5 22 15133.0 23 16722.5 24 18312.0 25 17815.5 26 22859.5 27 28400.0 28 31923.5 29 35447.0 30 40462.0 31 45477.0 32 54689.5 33 63902.0 34 79016.5 35 94131.0 36 100941.5 37 107752.0 38 118766.0 39 129780.0 40 169714.0 41 209648.0 42 247602.0 43 285556.0 44 289205.5 45 292855.0 46 284636.5 47 276418.0 48 268259.5 49 260101.0 50 248498.5 51 236896.0 52 230490.0 53 224084.0 54 208456.0 55 192828.0 56 188724.0 57 184620.0 58 179202.5 59 173785.0 60 159866.0 61 145947.0 62 120136.0 63 94325.0 64 77770.0 65 61215.0 66 48704.0 67 36193.0 68 28342.5 69 20492.0 70 16894.5 71 13297.0 72 11043.0 73 8789.0 74 7122.5 75 3854.5 76 2253.0 77 1661.0 78 1069.0 79 825.5 80 582.0 81 469.5 82 357.0 83 253.0 84 149.0 85 98.5 86 48.0 87 43.5 88 39.0 89 26.0 90 13.0 91 7.0 92 1.0 93 2.0 94 3.0 95 2.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3470100.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.311872478275237 #Duplication Level Percentage of deduplicated Percentage of total 1 80.80895880553416 12.373364723325357 2 6.347250839186391 1.9437659087449501 3 2.2957275966747748 1.054556646154243 4 1.2702913225265204 0.7780215496314272 5 0.8330005834654878 0.6377399354176208 6 0.6028761005608997 0.5538697183193001 7 0.4562382680550257 0.4890103526117396 8 0.36981231223015515 0.4530015172611393 9 0.29779696655223803 0.4103846258638558 >10 3.758537747759195 13.792933027551141 >50 1.2377388122549344 13.562692701028526 >100 1.6982497197110387 50.35021077253901 >500 0.019347858063704575 1.9866306256182564 >1k 0.003793697659549917 0.9197751264923824 >5k 1.8968488297749586E-4 0.2089447473786219 >10k+ 1.8968488297749586E-4 0.48509802206251634 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16702 0.48131177775856604 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 7194 0.2073139102619521 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3537 0.10192789833146018 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.88176133252644E-5 0.0 0.0 0.005100717558571799 0.0 2 2.88176133252644E-5 0.0 0.0 0.02414915996657157 0.0 3 2.88176133252644E-5 0.0 0.0 0.03645428085645947 0.0 4 2.88176133252644E-5 0.0 0.0 0.054177113051497076 0.0 5 2.88176133252644E-5 0.0 0.0 0.09541511771995044 0.0 6 2.88176133252644E-5 0.0 0.0 0.140053600760785 0.0 7 2.88176133252644E-5 0.0 0.0 0.1697645600991326 0.0 8 2.88176133252644E-5 0.0 0.0 0.254603613728711 0.0 9 2.88176133252644E-5 0.0 0.0 0.29169188207832625 0.0 10 2.88176133252644E-5 0.0 0.0 0.3519783291547794 0.0 11 2.88176133252644E-5 0.0 0.0 0.40716405867266076 0.0 12 2.88176133252644E-5 0.0 0.0 0.4577101524451745 0.0 13 8.64528399757932E-5 0.0 0.0 0.47765194086625745 0.0 14 8.64528399757932E-5 0.0 0.0 0.4864413129304631 0.0 15 8.64528399757932E-5 0.0 0.0 0.49886170427365206 0.0 16 8.64528399757932E-5 0.0 0.0 0.5269876948791101 0.0 17 8.64528399757932E-5 0.0 0.0 0.5595804155499842 0.0 18 8.64528399757932E-5 0.0 0.0 0.6158612143742255 0.0 19 8.64528399757932E-5 0.0 0.0 0.638367770381257 0.0 20 8.64528399757932E-5 0.0 0.0 0.6645053456672718 0.0 21 8.64528399757932E-5 0.0 0.0 0.6969539782715195 0.0 22 8.64528399757932E-5 0.0 0.0 0.7304112273421515 0.0 23 1.152704533010576E-4 0.0 0.0 0.7735800121033976 0.0 24 1.152704533010576E-4 0.0 0.0 0.8060862799342958 0.0 25 1.152704533010576E-4 0.0 0.0 0.832367943286937 0.0 26 1.152704533010576E-4 0.0 0.0 0.8584478833463013 0.0 27 1.152704533010576E-4 0.0 0.0 0.8878418489380709 0.0 28 1.152704533010576E-4 0.0 0.0 0.9170052736232385 0.0 29 1.152704533010576E-4 0.0 0.0 0.9516440448402064 0.0 30 1.152704533010576E-4 0.0 0.0 0.9979827670672315 0.0 31 1.152704533010576E-4 0.0 0.0 1.0379816143626985 0.0 32 1.152704533010576E-4 0.0 0.0 1.075415694072217 0.0 33 1.44088066626322E-4 0.0 0.0 1.119996541886401 0.0 34 1.44088066626322E-4 0.0 0.0 1.162733062447768 0.0 35 1.44088066626322E-4 0.0 0.0 1.22126163511138 0.0 36 1.44088066626322E-4 0.0 0.0 1.266159476672142 0.0 37 1.44088066626322E-4 0.0 0.0 1.3116913057260597 0.0 38 1.44088066626322E-4 0.0 0.0 1.36676176479064 0.0 39 1.44088066626322E-4 0.0 0.0 1.421486412495317 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTAC 30 2.1667747E-6 44.999996 30 CGGTCTA 900 0.0 44.0 31 CGTTTTT 16810 0.0 42.76472 1 CGACGGT 945 0.0 42.14286 28 CGCATCG 305 0.0 42.049183 21 TACGGGA 960 0.0 41.718746 4 ACGGTCT 1005 0.0 41.641792 30 ACGGGAT 1055 0.0 41.37441 5 CACGACG 1000 0.0 40.500004 26 CTATACG 100 0.0 40.5 1 ACATACG 1430 0.0 40.43706 17 TCACGAC 1005 0.0 40.298508 25 AGTACGG 270 0.0 40.000004 2 CATATGC 2945 0.0 39.57555 33 TACGGGT 205 0.0 39.512196 4 ATACGAA 1465 0.0 39.470993 19 CTCACGT 960 0.0 39.374996 45 TAGGGTA 1920 0.0 39.25781 5 GTTGATC 3000 0.0 39.225 16 TACGAAA 1480 0.0 39.222973 20 >>END_MODULE