##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545055_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2922338 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.854431280707434 31.0 31.0 33.0 28.0 34.0 2 31.143195961589658 31.0 31.0 34.0 28.0 34.0 3 31.231142325083546 31.0 31.0 34.0 28.0 34.0 4 35.072922776215485 35.0 35.0 37.0 32.0 37.0 5 34.93553825738159 35.0 35.0 37.0 32.0 37.0 6 34.99661811878023 36.0 35.0 37.0 32.0 37.0 7 35.55700606842877 37.0 35.0 37.0 35.0 37.0 8 35.486488900325696 37.0 35.0 37.0 35.0 37.0 9 37.19057138496642 39.0 37.0 39.0 34.0 39.0 10 36.43080814060523 38.0 35.0 39.0 32.0 39.0 11 36.17247799535851 38.0 35.0 39.0 31.0 39.0 12 35.59594270067323 37.0 35.0 39.0 30.0 39.0 13 35.23048805442765 37.0 35.0 39.0 30.0 39.0 14 36.22915145339108 38.0 35.0 40.0 30.0 41.0 15 36.51776420112937 38.0 35.0 40.0 31.0 41.0 16 36.56938006486587 38.0 35.0 40.0 31.0 41.0 17 36.45599892962416 38.0 35.0 40.0 31.0 41.0 18 36.3920275478059 38.0 35.0 40.0 30.0 41.0 19 36.32525327323533 38.0 35.0 40.0 30.0 41.0 20 36.20543722184087 38.0 34.0 40.0 30.0 41.0 21 36.06791822164308 38.0 34.0 40.0 30.0 41.0 22 35.960234237107414 37.0 34.0 40.0 30.0 41.0 23 35.898181866710836 37.0 34.0 40.0 30.0 41.0 24 35.8198966033361 37.0 34.0 40.0 30.0 41.0 25 35.684718537007015 37.0 34.0 40.0 29.0 41.0 26 35.55734962896147 37.0 34.0 40.0 29.0 41.0 27 35.45730507559358 37.0 34.0 40.0 29.0 41.0 28 35.48042663100572 37.0 34.0 40.0 29.0 41.0 29 35.495053618027754 37.0 34.0 40.0 29.0 41.0 30 35.36061776563834 37.0 34.0 40.0 29.0 41.0 31 35.209823778084534 37.0 34.0 40.0 27.0 41.0 32 35.01635779297261 37.0 34.0 40.0 27.0 41.0 33 34.78211418391712 37.0 33.0 40.0 25.0 41.0 34 34.58801925033997 37.0 33.0 40.0 24.0 41.0 35 34.39647022349913 37.0 33.0 40.0 24.0 41.0 36 34.24802264488228 37.0 33.0 40.0 23.0 41.0 37 34.205871120999696 37.0 33.0 40.0 23.0 41.0 38 34.15651372291638 37.0 33.0 40.0 23.0 41.0 39 34.08430886502519 36.0 33.0 40.0 23.0 41.0 40 33.949451774572275 36.0 33.0 40.0 23.0 41.0 41 33.876293912613804 36.0 33.0 40.0 23.0 41.0 42 33.85136421591206 36.0 33.0 40.0 23.0 41.0 43 33.736995173042956 36.0 33.0 40.0 23.0 41.0 44 33.682639722030785 36.0 32.0 40.0 23.0 41.0 45 33.6184476265237 36.0 32.0 40.0 23.0 41.0 46 33.57202691817305 35.0 32.0 40.0 23.0 41.0 47 33.45521496828909 35.0 32.0 40.0 22.0 41.0 48 33.405145811333256 35.0 32.0 39.0 22.0 41.0 49 33.414581407078856 35.0 32.0 39.0 22.0 41.0 50 33.34206207495505 35.0 32.0 39.0 22.0 41.0 51 33.160781538617364 35.0 32.0 39.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 4.0 13 10.0 14 27.0 15 126.0 16 343.0 17 1005.0 18 2169.0 19 4176.0 20 7120.0 21 11285.0 22 16771.0 23 24298.0 24 34010.0 25 46565.0 26 59754.0 27 68654.0 28 74852.0 29 82715.0 30 96403.0 31 115889.0 32 141800.0 33 177341.0 34 262547.0 35 324851.0 36 231287.0 37 280252.0 38 378133.0 39 479844.0 40 106.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.67996378242353 23.328889402936966 28.52483182985678 15.46631498478273 2 32.64290441420534 25.317126218801523 29.200626347807816 12.839343019185323 3 28.525071364092724 24.991428096270862 33.13720041966398 13.346300119972431 4 25.505263251547223 27.035373731580677 32.555474418085794 14.903888598786313 5 22.463452208471434 31.255282585381977 31.983843073593814 14.29742213255277 6 19.89971728116323 40.52563392735543 29.119526899352504 10.455121892128837 7 85.82326890318642 4.034919985299442 8.502096608948042 1.6397145025660962 8 87.09098673733155 3.3008844288374584 7.938061921653142 1.6700669121778522 9 82.88637385545408 4.66113091641008 9.523333714306832 2.929161513828996 10 42.75497906128586 24.897154264838633 18.45638663289462 13.891480040980886 11 37.27635201677561 24.831590322543114 23.428535645089653 14.463522015591627 12 33.496056924284595 22.69142036273696 27.61816052763233 16.19436218534612 13 22.970409309258546 31.677136594055856 27.37787346980397 17.97458062688163 14 18.418026935967024 34.79744642816813 30.025445379692563 16.759081256172284 15 17.811560469733482 24.177593420062976 40.90830697886418 17.10253913133936 16 19.691698906834183 20.22719480087519 40.19853281858567 19.88257347370496 17 19.830868297917625 20.209777240004406 30.989194268424804 28.970160193653165 18 22.622674037021042 23.469769752848578 33.759099734527624 20.148456475602753 19 27.238396106131464 24.249453690846163 28.158891955687537 20.35325824733484 20 28.14944746295603 24.330758454360858 27.011728280575348 20.508065802107765 21 23.76470483564872 26.564996930539863 30.42454363595176 19.24575459785966 22 22.638517515769905 23.48013816334729 28.801151680606417 25.080192640276383 23 20.621468153238947 27.626338910830984 28.434561642082468 23.317631293847597 24 20.320236741951135 25.42241862508717 35.81584334187216 18.441501291089534 25 20.632726262328312 24.746110819487686 33.717078585707746 20.90408433247626 26 19.16438139599184 29.14748396660482 29.431571570434357 22.256563066968983 27 19.306767389672242 29.377368394757898 30.695662171863763 20.6202020437061 28 17.72905803503907 27.22453733962327 36.1659739564691 18.880430668868556 29 18.861233710816478 25.343338108049103 35.18973506829121 20.60569311284321 30 20.817372939064544 27.335304814159073 33.42166443443572 18.425657812340667 31 26.440781319614636 26.086715499712902 28.35647348116474 19.116029699507724 32 26.908317929000685 26.014307722104697 28.421661012518058 18.655713336376557 33 25.917912301725536 26.41330332083421 27.506879765448076 20.161904611992178 34 20.60268182530563 27.523407627728208 29.462197733458623 22.411712813507542 35 21.3361698749426 25.65911266937637 30.948165475725258 22.056551979955774 36 27.31289125351003 26.38685189735068 27.046358087257534 19.253898761881754 37 21.12137610365399 30.603544148555027 28.63813152345827 19.63694822433271 38 21.945271217771527 30.410411116031067 26.104064622230556 21.54025304396685 39 21.326520067151712 28.68901543900808 27.577713460934362 22.406751032905845 40 23.550629667067945 25.368762956235724 28.382137863587303 22.698469513109025 41 19.724891508100704 25.267645289490815 28.974198056487648 26.033265145920836 42 22.084782800620598 26.515618658758843 26.688904568876016 24.71069397174454 43 21.57344564523337 26.614375202320883 27.68317696310283 24.129002189342916 44 20.96369413804974 28.21364263818901 29.076924024531042 21.745739199230204 45 20.13750633910246 31.929913651329862 26.684490295099334 21.248089714468346 46 22.638277981533964 29.444198446586263 27.437722809613398 20.479800762266375 47 22.113834881522944 28.643880345120927 27.206366956868095 22.03591781648803 48 22.258308244973716 27.398404975742025 29.412853680854166 20.930433098430093 49 22.00570228358253 26.137017689261132 30.592251820289096 21.265028206867242 50 21.17547662180076 29.76941750064503 28.011167770463242 21.043938107090966 51 20.33700413846721 30.334102352294636 27.361619360936345 21.967274148301804 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1434.0 1 2562.0 2 3690.0 3 16825.0 4 29960.0 5 22955.5 6 15951.0 7 16271.5 8 16592.0 9 17156.5 10 17721.0 11 17905.5 12 18090.0 13 17331.0 14 16572.0 15 15464.0 16 14356.0 17 13733.0 18 13110.0 19 12867.0 20 12624.0 21 12332.5 22 12041.0 23 12511.0 24 12981.0 25 14218.5 26 18423.0 27 21390.0 28 27403.5 29 33417.0 30 36690.0 31 39963.0 32 53183.5 33 66404.0 34 71163.0 35 75922.0 36 84322.0 37 92722.0 38 105844.5 39 118967.0 40 150788.5 41 182610.0 42 207758.5 43 232907.0 44 237462.0 45 242017.0 46 246710.0 47 251403.0 48 247639.0 49 243875.0 50 236366.0 51 228857.0 52 213895.5 53 198934.0 54 184692.0 55 170450.0 56 156565.5 57 142681.0 58 132126.5 59 121572.0 60 107664.5 61 93757.0 62 79969.5 63 66182.0 64 53928.0 65 41674.0 66 32415.5 67 23157.0 68 18326.0 69 13495.0 70 10958.0 71 8421.0 72 6761.5 73 5102.0 74 4139.5 75 2278.5 76 1380.0 77 1040.0 78 700.0 79 510.0 80 320.0 81 234.0 82 148.0 83 122.0 84 96.0 85 63.0 86 30.0 87 22.0 88 14.0 89 11.5 90 9.0 91 6.5 92 4.0 93 3.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2922338.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.442957608858332 #Duplication Level Percentage of deduplicated Percentage of total 1 79.8201352908542 14.72119371502561 2 6.215302056058858 2.292571046922871 3 2.4129800528220824 1.3350746647565521 4 1.3962632036611637 1.030048923037263 5 0.9344897112152124 0.8617377064928213 6 0.6752315979056938 0.747196064180183 7 0.5422279087731104 0.7000200435089665 8 0.4222352481608697 0.6229813426237358 9 0.3486400725272767 0.5786958670532873 >10 4.452986262478455 19.413736619787066 >50 1.5306154245538663 20.320142061964503 >100 1.2414159058920768 35.42393159400758 >500 0.004673290685739315 0.5701249949421159 >1k 0.002430111156584444 0.6567969570443399 >5k 1.8693162742957262E-4 0.19802854030038786 >10k+ 1.8693162742957262E-4 0.5277198583527223 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15307 0.5237929356563136 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5744 0.19655495018030084 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01618567051449901 0.0 2 0.0 0.0 0.0 0.05834369604063595 0.0 3 0.0 0.0 0.0 0.08127054433812926 0.0 4 0.0 0.0 0.0 0.11100700877174371 0.0 5 0.0 0.0 0.0 0.18054037554861896 0.0 6 0.0 0.0 0.0 0.26465111154151233 0.0 7 3.421917656342285E-5 0.0 0.0 0.3266562594744345 0.0 8 3.421917656342285E-5 0.0 0.0 0.4925850466304719 0.0 9 3.421917656342285E-5 0.0 0.0 0.579262220865622 0.0 10 3.421917656342285E-5 0.0 0.0 0.737560131648016 0.0 11 6.84383531268457E-5 0.0 0.0 0.855376756555881 0.0 12 6.84383531268457E-5 0.0 0.0 0.9715850801652649 0.0 13 6.84383531268457E-5 0.0 0.0 1.0175072151133784 0.0 14 6.84383531268457E-5 0.0 0.0 1.0378334059920515 0.0 15 6.84383531268457E-5 0.0 0.0 1.0670223636006513 0.0 16 6.84383531268457E-5 0.0 0.0 1.1299172101242225 0.0 17 6.84383531268457E-5 0.0 0.0 1.2005113713745639 0.0 18 6.84383531268457E-5 0.0 0.0 1.321031311230939 0.0 19 6.84383531268457E-5 0.0 0.0 1.3690408159494214 0.0 20 6.84383531268457E-5 0.0 0.0 1.4264948133994082 0.0 21 6.84383531268457E-5 0.0 0.0 1.494043467935605 0.0 22 6.84383531268457E-5 0.0 0.0 1.5581017664623324 0.0 23 1.0265752969026855E-4 0.0 0.0 1.630646420776789 0.0 24 1.0265752969026855E-4 0.0 0.0 1.688168856579903 0.0 25 1.0265752969026855E-4 0.0 0.0 1.7338514572920722 0.0 26 1.0265752969026855E-4 0.0 0.0 1.784735372841882 0.0 27 1.0265752969026855E-4 0.0 0.0 1.8410259182887128 0.0 28 1.0265752969026855E-4 0.0 0.0 1.8970427103230358 0.0 29 1.0265752969026855E-4 0.0 0.0 1.9573026802512234 0.0 30 1.0265752969026855E-4 0.0 0.0 2.0301553071547507 0.0 31 1.0265752969026855E-4 0.0 0.0 2.095582372744015 0.0 32 1.0265752969026855E-4 0.0 0.0 2.1608383424504627 0.0 33 1.0265752969026855E-4 0.0 0.0 2.232801270763341 0.0 34 1.0265752969026855E-4 1.0265752969026855E-4 0.0 2.3058592127262485 0.0 35 1.0265752969026855E-4 1.0265752969026855E-4 0.0 2.395958304617741 0.0 36 1.0265752969026855E-4 1.0265752969026855E-4 0.0 2.47072720540882 0.0 37 1.0265752969026855E-4 1.0265752969026855E-4 0.0 2.5475150376171407 0.0 38 1.0265752969026855E-4 1.0265752969026855E-4 0.0 2.6306676366662582 0.0 39 1.368767062536914E-4 1.0265752969026855E-4 0.0 2.740784946847353 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 14890 0.0 42.97515 1 TAGCCGT 290 0.0 41.89655 44 CGACGGT 565 0.0 41.0177 28 CACGACG 560 0.0 40.580357 26 CGGTCTA 570 0.0 39.86842 31 GACGGTC 580 0.0 39.568966 29 TATAGCG 190 0.0 39.078945 1 GCGCGAC 1350 0.0 39.0 9 ACCCGCT 1320 0.0 38.86364 34 ATTAGCG 175 0.0 38.571426 1 ATTACGA 35 6.251599E-6 38.571426 36 TAGTTCG 70 0.0 38.571426 1 CGTAAAT 70 0.0 38.571426 16 GCGATAC 160 0.0 37.96875 9 TACGGGT 430 0.0 37.67442 4 GTTTTTT 18205 0.0 37.55974 2 GGGCGAT 4595 0.0 37.50816 7 TATGCGA 30 1.1403528E-4 37.500004 39 TAGGGTA 1910 0.0 37.225132 5 TCACGAC 605 0.0 37.190083 25 >>END_MODULE