SRR1545053_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545053_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1596591
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7441	0.4660554894772675	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	5935	0.3717295162004546	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCG	1998	0.1251416298851741	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGCAAC	20	7.034112E-4	45.000004	21
GTACCGC	20	7.034112E-4	45.000004	15
GTCGATC	30	2.1660344E-6	45.000004	36
CACCTCG	40	6.8175723E-9	45.000004	38
CTACGTA	20	7.034112E-4	45.000004	28
CGCTAAT	20	7.034112E-4	45.000004	15
ACTCGGT	20	7.034112E-4	45.000004	25
CGTACGT	20	7.034112E-4	45.000004	35
TTACGTA	20	7.034112E-4	45.000004	14
CGTAAGT	20	7.034112E-4	45.000004	40
TATAGCG	95	0.0	45.000004	1
CGGTAAG	20	7.034112E-4	45.000004	42
ATCGATA	30	2.1660344E-6	45.000004	22
TACGTAC	20	7.034112E-4	45.000004	29
CTTACCG	20	7.034112E-4	45.000004	40
TCGCCGT	45	3.8562575E-10	45.0	25
TCGCCCG	25	3.89149E-5	45.0	37
TAATAGT	50	2.1827873E-11	45.0	35
GTCGCCC	25	3.89149E-5	45.0	17
CGAACCC	150	0.0	45.0	34