##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545053_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1596591 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.04070610444378 31.0 31.0 33.0 30.0 34.0 2 31.32188080729504 31.0 31.0 34.0 30.0 34.0 3 31.400326696066806 31.0 31.0 34.0 30.0 34.0 4 35.235224299773705 35.0 35.0 37.0 33.0 37.0 5 35.10328067739327 35.0 35.0 37.0 32.0 37.0 6 35.18301681520189 37.0 35.0 37.0 32.0 37.0 7 35.63924511662661 37.0 35.0 37.0 35.0 37.0 8 35.567437120715326 37.0 35.0 37.0 35.0 37.0 9 37.26338742984271 39.0 37.0 39.0 34.0 39.0 10 36.74820226344756 39.0 37.0 39.0 32.0 39.0 11 36.366079979155586 38.0 35.0 39.0 32.0 39.0 12 35.320262985323104 37.0 35.0 39.0 30.0 39.0 13 34.69945527689934 37.0 33.0 39.0 27.0 39.0 14 35.64700790622019 37.0 34.0 40.0 27.0 41.0 15 36.103109688079165 37.0 34.0 40.0 31.0 41.0 16 36.31254090747098 37.0 35.0 40.0 31.0 41.0 17 36.16207907973927 37.0 34.0 40.0 31.0 41.0 18 36.175294737349766 37.0 35.0 40.0 31.0 41.0 19 36.04185104388037 37.0 35.0 40.0 31.0 41.0 20 35.645217842265176 36.0 34.0 40.0 30.0 41.0 21 35.59106621545531 35.0 34.0 40.0 30.0 41.0 22 35.45326260764341 35.0 34.0 40.0 30.0 41.0 23 35.211391646326454 35.0 34.0 40.0 29.0 41.0 24 35.29999229608585 35.0 34.0 40.0 29.0 41.0 25 35.330738429566495 35.0 34.0 40.0 30.0 41.0 26 35.088735938007915 35.0 34.0 40.0 29.0 41.0 27 34.86714881895238 35.0 34.0 40.0 27.0 41.0 28 35.00489918833314 35.0 34.0 40.0 29.0 41.0 29 35.097545332524106 36.0 34.0 40.0 29.0 41.0 30 35.06488011018476 36.0 34.0 40.0 29.0 41.0 31 34.86164271250433 35.0 34.0 40.0 28.0 41.0 32 34.42892199692971 35.0 33.0 40.0 25.0 41.0 33 34.03753998362762 35.0 33.0 40.0 23.0 41.0 34 33.70548124096904 35.0 33.0 40.0 23.0 41.0 35 33.49431820672921 35.0 33.0 40.0 22.0 41.0 36 33.25388718839076 35.0 33.0 40.0 20.0 41.0 37 33.17219626065786 35.0 32.0 40.0 20.0 41.0 38 33.15603808364196 35.0 32.0 40.0 20.0 41.0 39 33.04947102921162 35.0 32.0 39.0 18.0 41.0 40 32.99247083316892 35.0 32.0 39.0 18.0 41.0 41 33.02345121574655 35.0 32.0 39.0 18.0 41.0 42 33.00160341627881 35.0 32.0 39.0 18.0 41.0 43 32.81848576122501 35.0 32.0 39.0 18.0 41.0 44 32.8965571019754 35.0 32.0 39.0 18.0 41.0 45 32.89165666097329 35.0 32.0 39.0 20.0 41.0 46 32.81415027392739 35.0 32.0 39.0 20.0 41.0 47 32.59840247126534 35.0 32.0 39.0 18.0 41.0 48 32.73691446337853 35.0 32.0 39.0 20.0 41.0 49 32.820783782446476 35.0 32.0 39.0 20.0 41.0 50 32.66058433249342 35.0 32.0 39.0 18.0 40.0 51 32.567402045984224 35.0 31.0 38.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 1.0 13 9.0 14 14.0 15 54.0 16 158.0 17 405.0 18 981.0 19 2142.0 20 3974.0 21 7424.0 22 13333.0 23 20560.0 24 26659.0 25 32704.0 26 37873.0 27 40254.0 28 40105.0 29 42258.0 30 49000.0 31 60884.0 32 77006.0 33 100922.0 34 174769.0 35 244654.0 36 103920.0 37 123413.0 38 167807.0 39 225241.0 40 66.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.09013892725187 22.476576656137983 26.554640480874564 15.878643935735576 2 30.53405662439535 28.643841785404028 29.027910090937503 11.794191499263118 3 26.96269739714178 27.326535098844978 33.21583298415186 12.49493451986138 4 23.58988620128762 26.84701341796365 35.43549976167973 14.127600619069003 5 25.17125550626303 30.837014614262515 30.415742040384796 13.57598783908966 6 19.124309231356058 41.72371007978875 28.36211653454141 10.789864154313785 7 82.10643802952666 4.711037454175803 11.822752351729402 1.3597721645681329 8 84.27054893833173 6.69670566851498 7.754835145632162 1.2779102475211248 9 80.67895910724788 4.286633207878536 9.265929721512899 5.768477963360685 10 56.59902880574925 21.494734719161013 13.21478074221889 8.691455732870848 11 51.17910598268436 17.01675632644804 21.314475654691776 10.489662036175828 12 42.32849865745204 19.863070755127644 23.213208642664277 14.595221944756046 13 22.254791615385532 42.486334947397296 23.697427832174927 11.561445605042243 14 12.881382896433713 47.61476170165058 27.69300340538059 11.810851996535119 15 11.247088327567925 20.8234920527549 52.80801407498852 15.12140554468865 16 12.855953716386978 15.86549091157347 50.72501348184977 20.553541890189784 17 13.670251178918083 18.73773558788694 30.70554700608985 36.886466227105124 18 20.303697064558175 20.56400167607108 36.179209327874204 22.953091931496544 19 28.11790871926498 21.27990199117996 27.393740788968497 23.208448500586563 20 33.348302727498776 20.121245829395253 26.623725174449813 19.906726268656154 21 20.207178920587676 29.366944947077865 30.0081861917047 20.417689940629753 22 20.92157603293517 22.87022787927528 29.905342069446718 26.30285401834283 23 20.12343800008894 29.19727093538671 25.912522367970258 24.766768696554095 24 18.12067085433903 24.957049112765887 41.08766741137837 15.834612621516719 25 15.166438994081766 26.4988340783582 38.83637074241305 19.498356185146978 26 14.395859678527561 33.42953831006187 32.67950276557991 19.495099245830648 27 18.97461528970162 34.2166528559913 30.367451651675353 16.441280202631734 28 13.16035227556713 30.986458022123387 40.706730778264436 15.146458924045044 29 13.584318087725661 22.112864221331574 44.12138111764378 20.181436573298985 30 16.628867380562713 32.151064361505235 34.30640658753557 16.913661670396486 31 29.19019335571853 25.145763692767904 25.42197720017212 20.24206575134145 32 33.04835114315438 24.796832751781764 27.56566960480173 14.589146500262121 33 31.480072228892688 25.529143030369077 25.333601404492445 17.657183336245787 34 19.298492851331368 26.51925258253366 28.752949252501107 25.42930531363386 35 21.615366740762035 24.737957310294245 31.92264017522334 21.72403577372038 36 31.05216050948552 25.064716010549976 27.13932372160434 16.743799758360154 37 19.558233761808754 32.064191768586944 29.41968231062307 18.95789215898123 38 20.814034402047863 32.294933392459306 23.495121793872066 23.39591041162076 39 20.26054261861679 32.7685048957435 27.160431193712103 19.810521291927614 40 23.57986484954506 25.312932366523423 24.905752318533676 26.20145046539784 41 16.572058842872096 24.19899648688988 27.695947177454965 31.53299749278306 42 23.63347908136774 24.637180091833162 24.05161998282591 27.67772084397319 43 22.8714805482431 26.768283173336187 25.567975768371486 24.792260510049225 44 19.53606152107835 30.137461629183683 29.14340616977047 21.183070679967507 45 16.874202597910173 38.73377715394864 22.91319442487149 21.478825823269705 46 23.48046556694858 33.933674936160855 25.532086802443455 17.053772694447105 47 22.14010977138165 28.683614025132297 26.69136929871207 22.484906904773986 48 24.27854096634642 24.651523151514695 30.570697191704078 20.499238690434808 49 21.674054281904382 23.13084565803014 33.389515536540046 21.805584523525436 50 19.97994476982521 34.27202082436892 27.096357176008134 18.651677229797738 51 18.523216027147843 35.15377451081711 24.08562994530221 22.23737951673284 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 893.0 1 1368.0 2 1843.0 3 7763.5 4 13684.0 5 10638.5 6 7593.0 7 8264.5 8 8936.0 9 9790.0 10 10644.0 11 10827.5 12 11011.0 13 10561.0 14 10111.0 15 9802.5 16 9494.0 17 8868.5 18 8243.0 19 8177.5 20 8112.0 21 7619.0 22 7126.0 23 7491.5 24 7857.0 25 8575.0 26 11358.0 27 13423.0 28 15183.5 29 16944.0 30 19723.5 31 22503.0 32 25936.0 33 29369.0 34 32232.5 35 35096.0 36 40579.0 37 46062.0 38 55106.0 39 64150.0 40 90848.5 41 117547.0 42 149096.5 43 180646.0 44 175358.0 45 170070.0 46 156595.0 47 143120.0 48 132850.5 49 122581.0 50 117938.5 51 113296.0 52 102917.0 53 92538.0 54 86920.0 55 81302.0 56 78041.5 57 74781.0 58 65059.0 59 55337.0 60 47480.0 61 39623.0 62 32410.5 63 25198.0 64 20968.5 65 16739.0 66 12545.5 67 8352.0 68 6614.5 69 4877.0 70 4189.5 71 3502.0 72 2947.5 73 2393.0 74 1859.0 75 904.5 76 484.0 77 391.5 78 299.0 79 220.0 80 141.0 81 81.5 82 22.0 83 16.0 84 10.0 85 8.5 86 7.0 87 7.0 88 7.0 89 5.5 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1596591.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.93871308206687 #Duplication Level Percentage of deduplicated Percentage of total 1 81.53672291540369 13.811271551160099 2 6.131142870046352 2.077073398817503 3 2.060717679233268 1.047177165350251 4 1.083905108246533 0.7343983054709862 5 0.7196164375672615 0.6094688182545464 6 0.5177027072964554 0.5261530572422343 7 0.41441835623738565 0.49137995425727965 8 0.3279667688753374 0.4444267998745503 9 0.3142350557348305 0.4790463704477627 >10 3.7961672539301334 15.261264356346175 >50 1.4439394553626548 17.761539486092868 >100 1.6448904869889178 44.72648830346181 >500 0.005965151358074045 0.7120934058175366 >1k 0.0018641097993981391 0.4735080131979327 >5k 7.456439197592557E-4 0.8447110142085286 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7441 0.4660554894772675 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5935 0.3717295162004546 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCG 1998 0.1251416298851741 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.009081850016691814 0.0 2 0.0 0.0 0.0 0.03964697283148909 0.0 3 0.0 0.0 0.0 0.05624483665509827 0.0 4 0.0 0.0 0.0 0.0963302436253242 0.0 5 0.0 0.0 0.0 0.20813094900322 0.0 6 0.0 0.0 0.0 0.26807115911338597 0.0 7 6.263344839097803E-5 0.0 0.0 0.3243786292168752 0.0 8 6.263344839097803E-5 0.0 0.0 0.4522134973828614 0.0 9 6.263344839097803E-5 0.0 0.0 0.5123416078382003 0.0 10 6.263344839097803E-5 0.0 0.0 0.7320597447937511 0.0 11 6.263344839097803E-5 0.0 0.0 0.8076583170016617 0.0 12 6.263344839097803E-5 0.0 0.0 0.9936170252744754 0.0 13 6.263344839097803E-5 0.0 0.0 1.0332639981059646 0.0 14 6.263344839097803E-5 0.0 0.0 1.048922360203709 0.0 15 6.263344839097803E-5 0.0 0.0 1.0841849916478297 0.0 16 6.263344839097803E-5 0.0 0.0 1.1361081203639505 0.0 17 6.263344839097803E-5 0.0 0.0 1.1837095411410938 0.0 18 6.263344839097803E-5 0.0 0.0 1.2644440561170645 0.0 19 6.263344839097803E-5 0.0 0.0 1.3248853338143582 0.0 20 6.263344839097803E-5 0.0 0.0 1.3645949400942383 0.0 21 1.2526689678195606E-4 0.0 0.0 1.4035529449934265 0.0 22 1.2526689678195606E-4 0.0 0.0 1.442385682995833 0.0 23 1.2526689678195606E-4 0.0 0.0 1.4844753603145702 0.0 24 1.2526689678195606E-4 0.0 0.0 1.5123472448485555 0.0 25 1.2526689678195606E-4 0.0 0.0 1.5402817628309315 0.0 26 1.2526689678195606E-4 0.0 0.0 1.570658985300556 0.0 27 1.2526689678195606E-4 0.0 0.0 1.6061095170898496 0.0 28 0.002505337935639121 0.0 0.0 1.6375515081821206 0.0 29 0.002505337935639121 0.0 0.0 1.6718120044519855 0.0 30 0.002505337935639121 0.0 0.0 1.7224198307518959 0.0 31 0.002505337935639121 0.0 0.0 1.7653237428997157 0.0 32 0.002505337935639121 0.0 0.0 1.804469648144077 0.0 33 0.002505337935639121 0.0 0.0 1.8457450906337316 0.0 34 0.002505337935639121 0.0 0.0 1.8878347679524687 0.0 35 0.002505337935639121 0.0 0.0 1.9446433056430859 0.0 36 0.002505337935639121 0.0 0.0 1.9904283564168908 0.0 37 0.002505337935639121 0.0 0.0 2.0421009513394477 0.0 38 0.002505337935639121 0.0 0.0 2.0869465003873877 0.0 39 0.002567971384030099 0.0 0.0 2.1332326187483206 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTGCAAC 20 7.034112E-4 45.000004 21 GTACCGC 20 7.034112E-4 45.000004 15 GTCGATC 30 2.1660344E-6 45.000004 36 CACCTCG 40 6.8175723E-9 45.000004 38 CTACGTA 20 7.034112E-4 45.000004 28 CGCTAAT 20 7.034112E-4 45.000004 15 ACTCGGT 20 7.034112E-4 45.000004 25 CGTACGT 20 7.034112E-4 45.000004 35 TTACGTA 20 7.034112E-4 45.000004 14 CGTAAGT 20 7.034112E-4 45.000004 40 TATAGCG 95 0.0 45.000004 1 CGGTAAG 20 7.034112E-4 45.000004 42 ATCGATA 30 2.1660344E-6 45.000004 22 TACGTAC 20 7.034112E-4 45.000004 29 CTTACCG 20 7.034112E-4 45.000004 40 TCGCCGT 45 3.8562575E-10 45.0 25 TCGCCCG 25 3.89149E-5 45.0 37 TAATAGT 50 2.1827873E-11 45.0 35 GTCGCCC 25 3.89149E-5 45.0 17 CGAACCC 150 0.0 45.0 34 >>END_MODULE