##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545052_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3333188 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.903660399593424 31.0 31.0 33.0 28.0 34.0 2 31.181500413418025 31.0 31.0 34.0 28.0 34.0 3 31.256641389564585 31.0 31.0 34.0 28.0 34.0 4 35.10544679748037 35.0 35.0 37.0 32.0 37.0 5 34.96546639433479 35.0 35.0 37.0 32.0 37.0 6 35.02848144179086 37.0 35.0 37.0 32.0 37.0 7 35.56589967322575 37.0 35.0 37.0 35.0 37.0 8 35.48796137511596 37.0 35.0 37.0 35.0 37.0 9 37.14366246368342 39.0 37.0 39.0 34.0 39.0 10 36.51767587066796 38.0 35.0 39.0 32.0 39.0 11 36.277018878023085 38.0 35.0 39.0 32.0 39.0 12 35.5763509289005 37.0 35.0 39.0 30.0 39.0 13 35.15604970376708 37.0 35.0 39.0 30.0 39.0 14 36.1273060505438 38.0 35.0 40.0 30.0 41.0 15 36.45603728322555 38.0 35.0 40.0 31.0 41.0 16 36.5328691330942 38.0 35.0 40.0 31.0 41.0 17 36.43192163178315 38.0 35.0 40.0 31.0 41.0 18 36.365897753142036 38.0 35.0 40.0 31.0 41.0 19 36.2804495275994 37.0 35.0 40.0 30.0 41.0 20 36.126363709457735 37.0 34.0 40.0 30.0 41.0 21 35.95483603085094 37.0 34.0 40.0 30.0 41.0 22 35.86040331358447 37.0 34.0 40.0 30.0 41.0 23 35.82427063819983 37.0 34.0 40.0 30.0 41.0 24 35.71762348838409 37.0 34.0 40.0 30.0 41.0 25 35.584447981932016 37.0 34.0 40.0 29.0 41.0 26 35.45268673714174 36.0 34.0 40.0 29.0 41.0 27 35.33743581220141 36.0 34.0 40.0 29.0 41.0 28 35.34584637890212 36.0 34.0 40.0 29.0 41.0 29 35.36797834385579 36.0 34.0 40.0 29.0 41.0 30 35.24033567863559 36.0 34.0 40.0 28.0 41.0 31 35.054587079996686 36.0 34.0 40.0 27.0 41.0 32 34.819204317308234 36.0 34.0 40.0 26.0 41.0 33 34.55001608070112 36.0 33.0 40.0 24.0 41.0 34 34.375875588175646 36.0 33.0 40.0 24.0 41.0 35 34.177892156098004 36.0 33.0 40.0 23.0 41.0 36 33.99163083510441 36.0 33.0 40.0 23.0 41.0 37 33.9438150503362 36.0 33.0 40.0 23.0 41.0 38 33.90121739307834 36.0 33.0 40.0 23.0 41.0 39 33.85876194202067 36.0 33.0 40.0 23.0 41.0 40 33.71254996717857 36.0 33.0 40.0 22.0 41.0 41 33.65891032849032 36.0 33.0 40.0 22.0 41.0 42 33.628584106267034 35.0 33.0 40.0 22.0 41.0 43 33.510650764373324 35.0 32.0 40.0 22.0 41.0 44 33.445181609918194 35.0 32.0 40.0 22.0 41.0 45 33.399901235693875 35.0 32.0 40.0 22.0 41.0 46 33.35661594845535 35.0 32.0 40.0 22.0 41.0 47 33.27359902891766 35.0 32.0 39.0 22.0 41.0 48 33.235039547724284 35.0 32.0 39.0 21.0 41.0 49 33.24744808873667 35.0 32.0 39.0 21.0 41.0 50 33.15951005463838 35.0 32.0 39.0 20.0 41.0 51 32.97879627551761 35.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 2.0 12 10.0 13 20.0 14 53.0 15 145.0 16 482.0 17 1219.0 18 2767.0 19 5224.0 20 9024.0 21 14104.0 22 20654.0 23 29336.0 24 40931.0 25 56152.0 26 71962.0 27 81129.0 28 87014.0 29 95184.0 30 109737.0 31 131073.0 32 160125.0 33 201752.0 34 311797.0 35 403380.0 36 250696.0 37 304872.0 38 404526.0 39 539658.0 40 157.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.021550539603524 22.566533900878078 25.972372395436437 15.439543164081954 2 34.80889766793832 24.877684667051483 27.812862640811137 12.500555024199056 3 29.965336488670907 24.330160795010663 32.506567286333684 13.197935429984748 4 26.73476563578172 27.458277180885087 30.863185634893682 14.94377154843951 5 22.644657307058587 31.3603673120148 31.17222910918916 14.822746271737447 6 20.43266086401367 40.02612513905606 29.87437252264199 9.66684147428828 7 83.06426160180584 5.271799850473481 9.656671030856945 2.007267516863735 8 84.03786405087261 4.219923988685906 9.59012812958645 2.152083830855025 9 78.76195402119532 6.2577328371517 11.527672606525645 3.452640535127331 10 44.52284119587614 25.215859411470344 18.100569184816457 12.160730207837062 11 40.1771217225071 23.43672184107227 22.93524997689899 13.450906459521637 12 35.277278089324696 23.206371797810384 27.613443946156053 13.902906166708867 13 22.278761353995034 35.65112438902336 27.384383959140617 14.685730297840985 14 17.017161948260945 38.33531141957789 30.51454043396292 14.13298619819824 15 16.370603758323863 23.90120209241123 44.8755365733946 14.852657575870307 16 18.11781993694925 20.1518186192918 43.529887903112574 18.20047354064637 17 17.880209577137563 19.8328747133375 31.96087349408434 30.32604221544059 18 22.031130557292297 23.581058134134647 35.20791506509684 19.179896243476215 19 29.11035921166163 23.89583185826902 28.32957516947739 18.664233760591962 20 29.36888048318907 23.23484303915651 27.82162302276379 19.574653454890633 21 22.617776135039488 27.15223383739531 30.735590071727124 19.494399955838073 22 21.937286465689905 24.605422796433924 28.921920995755414 24.535369742120757 23 19.80713359102457 28.63807862022784 28.207139831296647 23.347647957450945 24 19.26017974383683 24.450076023314615 37.98264604336749 18.30709818948106 25 19.32771268827321 24.900575665098998 36.163606733253566 19.608104913374223 26 17.86475890348819 31.365497535692555 29.88934317536245 20.880400385456806 27 18.078548224702597 31.35739718251716 31.618798579618073 18.945256013162172 28 16.84288434975765 28.444420176719703 37.168290537467435 17.544404936055212 29 17.5789064403208 26.115238624404025 36.64035751958785 19.665497415687323 30 19.18469645276534 28.872388836153256 33.584424280898645 18.358490430182755 31 27.50135905925498 26.598379689354456 27.90178651789218 17.998474733498384 32 28.213890125609474 26.107378281693084 28.745633309612302 16.933098283085144 33 26.143649863134033 27.01974806101546 27.36536312983246 19.471238946018047 34 20.487113238137184 28.292883569723642 29.246535148932495 21.973468043206683 35 21.162562687733185 26.327977899836437 31.03284303195619 21.47661638047419 36 28.026741965949714 27.32081118736777 26.79722835915646 17.855218487526056 37 21.05569802843404 32.261336594275505 28.393627962179153 18.289337415111298 38 20.77245567906761 32.827251268155294 25.39130706098786 21.008985991789242 39 21.185183674008186 30.62977545820998 27.491518630212276 20.69352223756956 40 23.132478576065914 26.79074807661614 27.698317646649397 22.37845570066855 41 18.882493276706864 26.113798561617287 28.602167054483573 26.401541107192273 42 22.087082996818662 26.99898715583999 25.5881756444581 25.325754202883243 43 21.476046355621108 26.943484735934486 27.70500793834611 23.8754609700983 44 19.848175380446587 29.849441435646597 29.492875889388774 20.80950729451804 45 18.57813000646828 34.85023947044091 25.871748008213157 20.69988251487765 46 21.009466012718153 32.082798810028116 27.613713957928564 19.294021219325163 47 21.715336788683988 28.790275256001163 27.819672937740087 21.674715017574766 48 21.92810606542445 27.35051248234423 30.25478910880514 20.466592343426175 49 21.489816956019283 26.614190378700513 31.511243890233615 20.384748775046592 50 20.261353395008022 32.21804470674922 27.673086546573433 19.84751535166933 51 19.27302030368524 32.66182405552882 26.854950875858187 21.210204764927752 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2065.0 1 3797.0 2 5529.0 3 22209.5 4 38890.0 5 29681.0 6 20472.0 7 20994.5 8 21517.0 9 22123.0 10 22729.0 11 22672.0 12 22615.0 13 21956.5 14 21298.0 15 20028.0 16 18758.0 17 17779.0 18 16800.0 19 16806.0 20 16812.0 21 17488.0 22 18164.0 23 19187.0 24 20210.0 25 22574.0 26 27767.5 27 30597.0 28 37039.5 29 43482.0 30 53615.5 31 63749.0 32 71064.0 33 78379.0 34 88210.5 35 98042.0 36 106629.5 37 115217.0 38 130891.5 39 146566.0 40 187640.5 41 228715.0 42 264019.5 43 299324.0 44 300850.5 45 302377.0 46 290021.5 47 277666.0 48 265358.0 49 253050.0 50 238866.5 51 224683.0 52 209535.5 53 194388.0 54 179186.5 55 163985.0 56 154214.5 57 144444.0 58 134162.0 59 123880.0 60 109368.0 61 94856.0 62 81566.5 63 68277.0 64 56773.5 65 45270.0 66 34808.0 67 24346.0 68 20518.0 69 16690.0 70 13100.5 71 9511.0 72 8239.0 73 6967.0 74 5488.5 75 2944.0 76 1878.0 77 1429.0 78 980.0 79 767.5 80 555.0 81 405.5 82 256.0 83 203.5 84 151.0 85 110.0 86 69.0 87 44.0 88 19.0 89 12.0 90 5.0 91 4.5 92 4.0 93 2.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3333188.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.316562332972634 #Duplication Level Percentage of deduplicated Percentage of total 1 81.49294935043137 14.111777371245266 2 6.129894041935629 2.1229738454339175 3 2.3047500484521195 1.1973104362782845 4 1.2595556335940636 0.8724469456391375 5 0.8251003004888041 0.7143950392184412 6 0.606323639772292 0.6299664661243042 7 0.44005103767048 0.5334119856457108 8 0.35556314214427664 0.492570505139918 9 0.29999093944791905 0.4675330622049217 >10 3.553614184508986 14.500607801828465 >50 1.2151132429183376 15.256940764753695 >100 1.500486504435408 45.984684044456145 >500 0.012761886280342397 1.408808858843285 >1k 0.003496407200093807 0.8454911708669254 >5k 1.7482036000469035E-4 0.24418102274383688 >10k+ 1.7482036000469035E-4 0.6169006795777223 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20378 0.6113666555861836 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 8066 0.24199055078801437 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.007680334862600009 0.0 2 0.0 0.0 0.0 0.0307813420665141 0.0 3 0.0 0.0 0.0 0.044881956853318805 0.0 4 0.0 0.0 0.0 0.06456281493873132 0.0 5 0.0 0.0 0.0 0.11118484765935795 0.0 6 0.0 0.0 0.0 0.16956739313834082 0.0 7 0.0 0.0 0.0 0.21006915901533307 0.0 8 0.0 0.0 0.0 0.32788429575529493 0.0 9 0.0 0.0 0.0 0.3809866110162403 0.0 10 0.0 0.0 0.0 0.4667303494432357 0.0 11 0.0 0.0 0.0 0.5322532062397921 0.0 12 0.0 0.0 0.0 0.602216256628789 0.0 13 0.0 0.0 0.0 0.6296074508848586 0.0 14 0.0 0.0 0.0 0.6408879427143024 0.0 15 0.0 0.0 0.0 0.6579586869987532 0.0 16 0.0 0.0 0.0 0.6957603351506125 0.0 17 0.0 0.0 0.0 0.7394722409897071 0.0 18 0.0 0.0 0.0 0.8142655019758861 0.0 19 0.0 0.0 0.0 0.8428267472461799 0.0 20 0.0 0.0 0.0 0.8768182292747964 0.0 21 0.0 0.0 0.0 0.9180400265451574 0.0 22 0.0 0.0 0.0 0.9586017950382637 0.0 23 0.0 0.0 0.0 1.0089439899579622 0.0 24 0.0 0.0 0.0 1.0470456511903918 0.0 25 0.0 0.0 0.0 1.0799870874370123 0.0 26 0.0 0.0 0.0 1.1137985616172865 0.0 27 0.0 0.0 0.0 1.1512701953805187 0.0 28 0.0 0.0 0.0 1.188891835684036 0.0 29 0.0 0.0 0.0 1.2343438173904382 0.0 30 0.0 0.0 0.0 1.2901762516845734 0.0 31 0.0 0.0 0.0 1.3412384779976407 0.0 32 0.0 0.0 0.0 1.391220657220655 0.0 33 0.0 0.0 0.0 1.4454930234958243 0.0 34 0.0 0.0 0.0 1.5000654028515643 0.0 35 3.0001308057031286E-5 0.0 0.0 1.5712585068708995 0.0 36 3.0001308057031286E-5 0.0 0.0 1.6290710274967988 0.0 37 3.0001308057031286E-5 0.0 0.0 1.6875135755918957 0.0 38 3.0001308057031286E-5 0.0 0.0 1.7541164794785054 0.0 39 6.000261611406257E-5 0.0 0.0 1.8377001237253945 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGGT 25 3.8924063E-5 45.000004 19 GTCGATC 20 7.035218E-4 45.0 26 CACTCGA 20 7.035218E-4 45.0 41 CGTTTTT 18920 0.0 42.562103 1 ATTAACG 160 0.0 40.78125 1 GCCGACC 290 0.0 40.344826 14 GCGCGAC 1370 0.0 39.41606 9 ATCGTAC 40 3.4608638E-7 39.375 24 CCCGTAA 40 3.4608638E-7 39.375 33 CGTAGGT 40 3.4608638E-7 39.375 33 CACGACG 445 0.0 38.932583 26 ATCCCGT 35 6.251863E-6 38.571426 28 CGCATCG 195 0.0 38.076923 21 TAGGGCG 1155 0.0 37.792206 5 ACCCGCT 1430 0.0 37.762238 34 CGCGACC 1480 0.0 37.550674 10 ACGTTAG 150 0.0 37.5 1 CGCGATA 30 1.1403875E-4 37.499996 31 TCGTAGA 30 1.1403875E-4 37.499996 16 GGCGCGA 1435 0.0 37.473866 8 >>END_MODULE