##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545049_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2898530 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.907247811821854 31.0 31.0 33.0 28.0 34.0 2 31.190023218666013 31.0 31.0 34.0 28.0 34.0 3 31.26598724180878 31.0 31.0 34.0 28.0 34.0 4 35.08922281294311 35.0 35.0 37.0 32.0 37.0 5 34.94502489192798 35.0 35.0 37.0 32.0 37.0 6 35.00105225752364 37.0 35.0 37.0 32.0 37.0 7 35.5531959303509 37.0 35.0 37.0 35.0 37.0 8 35.491312492884326 37.0 35.0 37.0 35.0 37.0 9 37.176613317785225 39.0 37.0 39.0 34.0 39.0 10 36.60109917785912 39.0 35.0 39.0 32.0 39.0 11 36.25925865869941 38.0 35.0 39.0 32.0 39.0 12 35.1937357902109 37.0 34.0 39.0 30.0 39.0 13 34.570363943102194 37.0 33.0 39.0 26.0 39.0 14 35.50656091191052 37.0 33.0 40.0 27.0 41.0 15 35.981324326468936 37.0 34.0 40.0 30.0 41.0 16 36.154122951979105 37.0 34.0 40.0 31.0 41.0 17 36.089009946421115 37.0 34.0 40.0 31.0 41.0 18 36.01302315311555 37.0 34.0 40.0 30.0 41.0 19 35.880595336256654 37.0 34.0 40.0 30.0 41.0 20 35.69774678888954 36.0 34.0 40.0 30.0 41.0 21 35.49417359834123 36.0 34.0 40.0 29.0 41.0 22 35.37679133905807 35.0 34.0 40.0 29.0 41.0 23 35.3834840419109 35.0 34.0 40.0 29.0 41.0 24 35.26567225455662 35.0 34.0 40.0 29.0 41.0 25 35.147381258776 35.0 34.0 40.0 29.0 41.0 26 35.00072830020735 35.0 34.0 40.0 29.0 41.0 27 34.8848512866867 35.0 34.0 40.0 27.0 41.0 28 34.920062583447475 36.0 34.0 40.0 27.0 41.0 29 34.98272848650868 36.0 34.0 40.0 29.0 41.0 30 34.889256623184856 36.0 34.0 40.0 28.0 41.0 31 34.65863834426416 35.0 33.0 40.0 27.0 41.0 32 34.392779788375485 35.0 33.0 40.0 25.0 41.0 33 34.125140674755826 35.0 33.0 40.0 24.0 41.0 34 33.97428662114934 35.0 33.0 40.0 23.0 41.0 35 33.78281715214264 35.0 33.0 40.0 23.0 41.0 36 33.541981280166155 35.0 33.0 40.0 22.0 41.0 37 33.47343619006876 35.0 32.0 40.0 22.0 41.0 38 33.498175626955735 35.0 32.0 40.0 23.0 41.0 39 33.470578189634054 35.0 32.0 40.0 23.0 41.0 40 33.25111832549603 35.0 32.0 39.0 21.0 41.0 41 33.231812677460645 35.0 32.0 39.0 21.0 41.0 42 33.21386944416653 35.0 32.0 39.0 22.0 41.0 43 33.06976570882482 35.0 32.0 39.0 21.0 41.0 44 33.00927746133385 35.0 32.0 39.0 21.0 41.0 45 32.9621832446102 35.0 32.0 39.0 21.0 41.0 46 32.92277050780913 35.0 32.0 39.0 21.0 41.0 47 32.852901988249215 35.0 32.0 39.0 21.0 40.0 48 32.85146574298006 35.0 32.0 39.0 21.0 40.0 49 32.894362659693016 35.0 32.0 39.0 20.0 40.0 50 32.78133571155034 35.0 32.0 39.0 20.0 40.0 51 32.578158238831406 35.0 31.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 4.0 12 9.0 13 9.0 14 51.0 15 147.0 16 413.0 17 1128.0 18 2596.0 19 5009.0 20 8505.0 21 13449.0 22 19182.0 23 27385.0 24 38064.0 25 51749.0 26 65778.0 27 75138.0 28 80988.0 29 88096.0 30 101601.0 31 122548.0 32 150073.0 33 190043.0 34 314061.0 35 416487.0 36 194160.0 37 228398.0 38 301205.0 39 402047.0 40 204.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.9414565314142 23.081389531935155 27.719154191952473 16.257999744698175 2 32.74166560290906 24.82803352043967 29.93306952144708 12.49723135520419 3 29.22122593176541 24.46943795648139 33.5516968946328 12.757639217120403 4 26.79965361752337 27.558969546632255 31.133264102838336 14.50811273300604 5 22.928415438170383 31.157483276005422 31.98693820660818 13.927163079216015 6 21.01392774958341 40.00662404736194 28.806187964243946 10.173260238810707 7 83.47189782406944 5.487574736159363 9.146463897216865 1.8940635425543293 8 85.14064025557782 4.28061810641946 8.866149392968161 1.7125922450345519 9 80.24991978692647 5.969094679026956 10.720503151597534 3.0604823824490346 10 52.95394562071118 21.24035286852301 15.287059302474013 10.518642208291789 11 49.373820522816736 19.24855012713341 19.832777304357727 11.544852045692126 12 43.8764132163545 20.65453867995156 23.497566007596955 11.971482096096988 13 20.873373744622274 41.676021983557185 23.826042856206424 13.624561415614123 14 13.821178321424998 44.54488999596347 28.441589357363906 13.192342325247624 15 13.137003929578098 21.732222885393632 51.772277671785346 13.358495513242918 16 14.287966658961611 16.444922081192882 50.52164372975266 18.745467530092842 17 14.442389763086805 16.690460336791407 31.34844214136131 37.51870775876048 18 20.826867412101997 22.266183203209902 36.330139760499286 20.57680962418881 19 30.61520839874005 22.50437290626628 26.93903461409749 19.941384080896178 20 32.64803193342832 21.35389318033624 26.379958116700536 19.6181167695349 21 21.71545576550872 27.113226359568472 29.43743897768869 21.733878897234117 22 21.548164069373097 24.277030080765076 26.995925520867477 27.178880328994353 23 19.073116372782064 29.954873677346793 25.918965820605617 25.053044129265523 24 19.05527974525018 22.377377498249114 41.341473091532606 17.225869664968105 25 16.690460336791407 23.21393947966728 38.574415307069444 21.521184876471867 26 15.83675173277489 34.613890489317 28.965337602163853 20.584020175744257 27 17.534232869765017 34.43490320955795 30.443086668069675 17.587777252607356 28 14.618030518918209 28.993248301725355 40.469410356284044 15.919310823072387 29 15.24048396946038 24.480581536157985 39.68763476658858 20.591299727793054 30 17.55110349038996 29.742973162258114 33.73579021090001 18.970133136451924 31 29.47770076556047 25.96150462475807 26.155810014041602 18.40498459563986 32 30.588436207318882 26.620666337764316 27.436079667969626 15.354817786947178 33 27.894070442603663 28.243661442179313 25.342570199376922 18.519697915840098 34 19.54307873301294 28.74153450197169 28.07833626010426 23.637050504911112 35 21.112529454585598 24.88892645582416 31.065195116145077 22.93334897344516 36 31.296657271099487 25.407499663622595 25.937216451097626 17.35862661418029 37 19.587825552952705 33.67889930413002 29.294814957926953 17.438460184990323 38 20.313779743525163 34.14230661749231 23.216630498908067 22.327283140074453 39 21.648249284982388 30.201170938372208 27.48538052047072 20.66519925617468 40 23.137210931058156 26.186377232597213 26.547629315549603 24.12878252079502 41 16.73434465056425 24.78797873404795 29.086536968739324 29.391139646648472 42 22.79079395417677 26.00870096221188 24.169492811873607 27.031012271737744 43 23.064518911310216 26.528274677163942 25.817086592169137 24.59011981935671 44 19.383446091639556 31.897858569688776 28.340538134847666 20.378157203824006 45 17.42203806757218 38.47508909688705 23.34407441013203 20.75879842540874 46 21.93442883116614 33.35583899424881 25.939251965651554 18.770480208933492 47 23.075075986793305 28.528529978989347 25.99262384726051 22.403770186956837 48 23.927956584889582 24.672471908174142 30.834422966124208 20.565148540812068 49 20.48666047962243 25.1249426433399 31.994321259397008 22.394075617640667 50 19.323243161188604 33.32668628580694 27.21824511045254 20.131825442551914 51 18.52318244075445 34.55154854357209 24.03000831455945 22.89526070111401 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2872.0 1 4327.0 2 5782.0 3 17753.0 4 29724.0 5 23227.5 6 16731.0 7 17854.0 8 18977.0 9 19683.5 10 20390.0 11 20776.0 12 21162.0 13 20313.5 14 19465.0 15 18048.0 16 16631.0 17 15497.5 18 14364.0 19 14002.0 20 13640.0 21 14016.0 22 14392.0 23 14253.0 24 14114.0 25 15562.0 26 18610.0 27 20210.0 28 28539.5 29 36869.0 30 39436.5 31 42004.0 32 49244.5 33 56485.0 34 58993.0 35 61501.0 36 62866.5 37 64232.0 38 84136.5 39 104041.0 40 151258.0 41 198475.0 42 249985.5 43 301496.0 44 306788.5 45 312081.0 46 286731.0 47 261381.0 48 240327.5 49 219274.0 50 210852.0 51 202430.0 52 189623.0 53 176816.0 54 160282.0 55 143748.0 56 129992.0 57 116236.0 58 113744.5 59 111253.0 60 103034.5 61 94816.0 62 79598.5 63 64381.0 64 50625.0 65 36869.0 66 28918.5 67 20968.0 68 15948.0 69 10928.0 70 8902.0 71 6876.0 72 5683.0 73 4490.0 74 3686.0 75 2044.0 76 1206.0 77 982.0 78 758.0 79 528.0 80 298.0 81 221.5 82 145.0 83 113.5 84 82.0 85 50.0 86 18.0 87 17.0 88 16.0 89 10.5 90 5.0 91 4.0 92 3.0 93 3.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2898530.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.680254938602761 #Duplication Level Percentage of deduplicated Percentage of total 1 82.79986242638327 12.983229517269256 2 6.623728243371556 2.0772349500017886 3 2.345372829288039 1.1032813166792552 4 1.2026285493704947 0.754300890022855 5 0.75274650415251 0.590162854462668 6 0.5194666683814331 0.48872218753964936 7 0.3534970064350461 0.38800462266540975 8 0.286126792104436 0.3589232835969719 9 0.23457432442129983 0.3310366688078844 >10 2.3307271412860366 8.609212416260151 >50 0.8169397073701642 9.36032624755449 >100 1.695366053871683 57.339682486951496 >500 0.032764974587998756 3.22636318341371 >1k 0.005756009049243025 1.479776740145033 >5k 0.0 0.0 >10k+ 4.4276992686484803E-4 0.9097426346293722 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15623 0.5389973538310799 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 10584 0.3651506108268674 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 4706 0.16235816086085014 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3801 0.13113543761837898 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 2911 0.10043021807605923 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.450024667676374E-5 0.0 0.0 0.012489089296988474 0.0 2 3.450024667676374E-5 0.0 0.0 0.038536775537945094 0.0 3 3.450024667676374E-5 0.0 0.0 0.05306137938886263 0.0 4 3.450024667676374E-5 0.0 0.0 0.07517603750866819 0.0 5 3.450024667676374E-5 0.0 0.0 0.12409738729631917 0.0 6 3.450024667676374E-5 0.0 0.0 0.1823683039333731 0.0 7 3.450024667676374E-5 0.0 0.0 0.2230095945186008 0.0 8 3.450024667676374E-5 0.0 0.0 0.3340313883244265 0.0 9 3.450024667676374E-5 0.0 0.0 0.3883347765936526 0.0 10 3.450024667676374E-5 0.0 0.0 0.4870399823358737 0.0 11 3.450024667676374E-5 0.0 0.0 0.5637340306983195 0.0 12 6.900049335352747E-5 0.0 0.0 0.6459826187757243 0.0 13 6.900049335352747E-5 0.0 0.0 0.6786198521319428 0.0 14 6.900049335352747E-5 0.0 0.0 0.6914194436490221 0.0 15 6.900049335352747E-5 0.0 0.0 0.7109120830213936 0.0 16 6.900049335352747E-5 0.0 0.0 0.7544858945741462 0.0 17 6.900049335352747E-5 0.0 0.0 0.8046147529954839 0.0 18 6.900049335352747E-5 0.0 0.0 0.9023884520774323 0.0 19 6.900049335352747E-5 0.0 0.0 0.9319551634794189 0.0 20 6.900049335352747E-5 0.0 0.0 0.968732426436849 0.0 21 1.0350074003029122E-4 0.0 0.0 1.010926228122531 0.0 22 1.0350074003029122E-4 0.0 0.0 1.0516365192011123 0.0 23 1.0350074003029122E-4 0.0 0.0 1.101316874415652 0.0 24 1.0350074003029122E-4 0.0 0.0 1.136955629232749 0.0 25 1.0350074003029122E-4 0.0 0.0 1.1674883475416848 0.0 26 1.0350074003029122E-4 0.0 0.0 1.1974690619037927 0.0 27 1.0350074003029122E-4 0.0 0.0 1.2297612927932435 0.0 28 1.0350074003029122E-4 0.0 0.0 1.2639510372499163 0.0 29 1.0350074003029122E-4 0.0 0.0 1.3001762962605183 0.0 30 1.0350074003029122E-4 0.0 0.0 1.3496841502416743 0.0 31 1.0350074003029122E-4 0.0 0.0 1.3978464946024365 0.0 32 1.0350074003029122E-4 0.0 0.0 1.44183430911531 0.0 33 1.0350074003029122E-4 0.0 0.0 1.4878231379354363 0.0 34 1.0350074003029122E-4 0.0 0.0 1.5318799529416636 0.0 35 1.0350074003029122E-4 0.0 0.0 1.5940148972065151 0.0 36 1.0350074003029122E-4 0.0 0.0 1.6474212790621452 0.0 37 1.0350074003029122E-4 0.0 0.0 1.7025871734982905 0.0 38 1.0350074003029122E-4 0.0 0.0 1.7548895474602644 0.0 39 1.0350074003029122E-4 0.0 0.0 1.8072954221622684 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAGCG 140 0.0 45.000004 1 ATCGATC 55 1.8189894E-12 45.000004 13 CAACGTC 25 3.8922815E-5 45.0 34 TATATCG 20 7.0350664E-4 45.0 33 ACTACGT 20 7.0350664E-4 45.0 27 CTCGAAT 25 3.8922815E-5 45.0 21 CAATCGT 40 6.8212103E-9 45.0 41 TTACGTA 30 2.166651E-6 44.999996 24 TCGAATC 30 2.166651E-6 44.999996 35 TCGACAC 185 0.0 43.783783 34 CGCATCG 235 0.0 43.085106 21 ATAGCGG 460 0.0 43.04348 2 CTATGCG 105 0.0 42.85714 1 CGTTTTT 15725 0.0 42.53895 1 CGACGGT 420 0.0 42.321426 28 CGGGTAT 240 0.0 42.187496 6 TCGAGAG 200 0.0 41.625 1 GCATATC 555 0.0 40.945946 28 GACCGTT 150 0.0 40.5 43 CGTAATC 50 1.0822987E-9 40.5 43 >>END_MODULE