##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545048_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2616659 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.901778565720637 31.0 31.0 33.0 28.0 34.0 2 31.17904816791183 31.0 31.0 34.0 28.0 34.0 3 31.266082435655544 31.0 31.0 34.0 28.0 34.0 4 35.09243275489852 35.0 35.0 37.0 32.0 37.0 5 34.9518267378363 35.0 35.0 37.0 32.0 37.0 6 35.02138490342074 37.0 35.0 37.0 32.0 37.0 7 35.57825761782487 37.0 35.0 37.0 35.0 37.0 8 35.51326022993443 37.0 35.0 37.0 35.0 37.0 9 37.18754488070475 39.0 37.0 39.0 34.0 39.0 10 36.53321315463727 38.0 35.0 39.0 32.0 39.0 11 36.34267323331011 38.0 35.0 39.0 32.0 39.0 12 35.65850269370216 37.0 35.0 39.0 30.0 39.0 13 35.23391928409472 37.0 35.0 39.0 30.0 39.0 14 36.23485215307 38.0 35.0 40.0 30.0 41.0 15 36.56860829018989 38.0 35.0 40.0 31.0 41.0 16 36.62979394716698 38.0 35.0 40.0 31.0 41.0 17 36.51792266397723 38.0 35.0 40.0 31.0 41.0 18 36.451476864199726 38.0 35.0 40.0 31.0 41.0 19 36.37284758923497 38.0 35.0 40.0 31.0 41.0 20 36.240630896116 38.0 34.0 40.0 30.0 41.0 21 36.09861048000523 38.0 34.0 40.0 30.0 41.0 22 35.97884592528106 37.0 34.0 40.0 30.0 41.0 23 35.912521654522045 37.0 34.0 40.0 30.0 41.0 24 35.85726531428054 37.0 34.0 40.0 30.0 41.0 25 35.72108478789173 37.0 34.0 40.0 30.0 41.0 26 35.57478410446298 37.0 34.0 40.0 29.0 41.0 27 35.465415248987355 37.0 34.0 40.0 29.0 41.0 28 35.49633865169287 37.0 34.0 40.0 29.0 41.0 29 35.53508921108941 37.0 34.0 40.0 29.0 41.0 30 35.42485054414809 37.0 34.0 40.0 29.0 41.0 31 35.283500830639376 37.0 34.0 40.0 28.0 41.0 32 35.05177556571185 37.0 34.0 40.0 27.0 41.0 33 34.83636958426757 37.0 33.0 40.0 26.0 41.0 34 34.66908909414639 37.0 34.0 40.0 25.0 41.0 35 34.49331877023334 37.0 33.0 40.0 24.0 41.0 36 34.330372050771615 37.0 33.0 40.0 23.0 41.0 37 34.29028352567148 37.0 33.0 40.0 23.0 41.0 38 34.26033579461443 36.0 33.0 40.0 23.0 41.0 39 34.207247486202824 36.0 33.0 40.0 23.0 41.0 40 34.06238986432699 36.0 33.0 40.0 23.0 41.0 41 33.99888865916422 36.0 33.0 40.0 23.0 41.0 42 33.96985201357915 36.0 33.0 40.0 23.0 41.0 43 33.867082795274435 36.0 33.0 40.0 23.0 41.0 44 33.80657433773373 36.0 33.0 40.0 23.0 41.0 45 33.7642902647995 35.0 33.0 40.0 23.0 41.0 46 33.715145916988035 35.0 33.0 40.0 23.0 41.0 47 33.62345341903549 35.0 32.0 40.0 23.0 41.0 48 33.59321715210121 35.0 32.0 40.0 23.0 41.0 49 33.61049299889668 36.0 32.0 39.0 23.0 41.0 50 33.5021472037434 35.0 32.0 39.0 23.0 41.0 51 33.323020691652985 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 6.0 13 9.0 14 32.0 15 82.0 16 278.0 17 782.0 18 1703.0 19 3357.0 20 6012.0 21 9681.0 22 14818.0 23 20828.0 24 28516.0 25 39755.0 26 50897.0 27 58725.0 28 64222.0 29 72195.0 30 84833.0 31 102280.0 32 126404.0 33 157493.0 34 238696.0 35 310379.0 36 203195.0 37 245851.0 38 333027.0 39 442490.0 40 109.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.556302139483975 23.143520038338966 28.11929257881902 15.18088524335804 2 32.04253974247313 25.5318709850997 29.843284891153182 12.582304381273984 3 29.183626907441894 25.208405069212304 32.785510072195116 12.822457951150684 4 26.43817937300963 26.721861732843294 31.595137157726704 15.244821736420375 5 22.65308548037784 32.051788177213766 30.673427450806546 14.621698891601847 6 20.637767473713616 41.27626106420439 27.920413015222845 10.165558446859144 7 85.78297745330974 4.429006607280506 8.018240053442195 1.769775885967564 8 87.18346563308403 3.67323369227706 7.646391830192624 1.496908844446296 9 81.7181757347824 6.280222222307148 9.044548792945507 2.9570532499649365 10 38.83750232643994 36.02773613222052 14.545762363380174 10.588999177959375 11 38.641527229952395 21.454687064688216 25.044302677574727 14.859483027784668 12 34.04868574774168 22.354919001673508 28.19496159033332 15.401433660251488 13 21.79848425033602 34.802547829121025 28.440885877754802 14.958082042788151 14 16.0483272753538 37.890607832354156 30.64010251240227 15.420962379889774 15 15.195178278866294 23.782082418840208 44.976743243961096 16.045996058332403 16 17.79200117401618 20.857666207174873 42.399181551742124 18.95115106706682 17 17.818141377993847 19.57587901212959 31.678258420374988 30.927721189501572 18 21.83436970579659 22.563123433355283 35.05531290091678 20.54719395993135 19 27.245200845811397 23.300017312152637 28.780211712722213 20.674570129313754 20 28.49224908557057 23.330514216793247 27.844896870398472 20.33233982723771 21 23.551024417014215 26.161490664240162 30.370636754731894 19.91684816401373 22 23.04507389002541 23.612247526330332 27.93883345135916 25.403845132285102 23 18.983711672021457 27.79047632878415 28.673128596427734 24.552683402766657 24 18.86539285401728 24.623804630255606 38.27013760677261 18.24066490895451 25 19.177431984832566 25.05920717984269 35.38837120159715 20.374989633727587 26 18.04824396300779 31.080167496032153 29.094658493903868 21.77693004705619 27 18.353709826156177 31.31607901526336 30.458687968130356 19.871523190450112 28 16.83990921247285 28.092770208116534 36.940999954522155 18.126320624888457 29 17.57015339025834 24.171128144706667 37.123599215641015 21.13511924939398 30 19.448120676022363 28.418108740955546 33.41260745095177 18.721163132070323 31 26.845569101667433 26.12082812471935 27.186156086826752 19.847446686786473 32 27.706972899411042 26.07672608467515 28.723230654051594 17.493070361862205 33 27.084614388042155 25.99864942279449 26.75182360406916 20.1649125850942 34 21.258253368130887 26.839225134035427 28.92673443501809 22.9757870628156 35 20.86653247519069 25.88117137158491 31.2788941929384 21.973401960285997 36 28.252974499160956 25.72983334855631 27.210461890525284 18.806730261757455 37 21.382839720422112 30.955695793758377 28.992619978377004 18.668844507442508 38 21.457171148399542 32.0139918881291 25.51765438293641 21.01118258053495 39 21.26222790206901 30.372241854976135 27.31590168990304 21.04962855305181 40 23.690247754866036 25.819757178906382 27.600004433134007 22.889990633093575 41 19.282031017415722 25.480316693921523 28.217203693717828 27.02044859494493 42 21.88229341308898 25.952827632488606 26.643708637617664 25.52117031680475 43 22.43933963118618 26.402217484204094 27.285825168659727 23.872617715949996 44 20.016249729139336 29.05055645385967 29.52528395943071 21.407909857570285 45 18.776424440479254 34.25753986285565 26.095375820846357 20.870659875818745 46 21.946956022928475 31.257683939710905 27.311927155964916 19.483432881395704 47 22.050943588751917 27.902527612501288 27.750960289437792 22.295568509309007 48 22.770448881569973 26.27117251426342 30.12620291753721 20.8321756866294 49 21.787095681936393 25.66066117136394 31.5817995390305 20.97044360766917 50 20.53228945766338 32.39405669596229 27.97754694058339 19.096106905790936 51 20.185358504872053 31.668627818909535 26.829556315897484 21.31645736032093 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1641.0 1 2575.5 2 3510.0 3 13592.0 4 23674.0 5 18185.0 6 12696.0 7 13403.5 8 14111.0 9 14712.5 10 15314.0 11 15392.0 12 15470.0 13 14804.5 14 14139.0 15 13827.0 16 13515.0 17 12931.5 18 12348.0 19 12132.5 20 11917.0 21 12355.5 22 12794.0 23 13798.0 24 14802.0 25 16338.0 26 19586.5 27 21299.0 28 27391.5 29 33484.0 30 39802.5 31 46121.0 32 53665.5 33 61210.0 34 71099.5 35 80989.0 36 83544.5 37 86100.0 38 99443.0 39 112786.0 40 140362.5 41 167939.0 42 200437.5 43 232936.0 44 236408.5 45 239881.0 46 236170.0 47 232459.0 48 223053.0 49 213647.0 50 203617.0 51 193587.0 52 178269.5 53 162952.0 54 147685.0 55 132418.0 56 125842.5 57 119267.0 58 109301.0 59 99335.0 60 86885.5 61 74436.0 62 61860.0 63 49284.0 64 40415.0 65 31546.0 66 24988.0 67 18430.0 68 13890.5 69 9351.0 70 7696.0 71 6041.0 72 4773.5 73 3506.0 74 2789.5 75 1478.0 76 883.0 77 685.5 78 488.0 79 330.5 80 173.0 81 179.0 82 185.0 83 107.5 84 30.0 85 19.5 86 9.0 87 6.0 88 3.0 89 4.0 90 5.0 91 3.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2616659.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.813158655065823 #Duplication Level Percentage of deduplicated Percentage of total 1 81.44408477983552 13.693323189200065 2 6.374128884779348 2.1433848045526593 3 2.1806765691515206 1.099921833975874 4 1.1730509215061204 0.7889076501501429 5 0.7754472121300052 0.6518858503085131 6 0.534551450770126 0.5392499010656243 7 0.41667109846064654 0.49038900997795826 8 0.32681316244823194 0.43958092406447397 9 0.26618352183387994 0.4027847205561481 >10 3.498333055492865 14.122824924565078 >50 1.3367750971950585 16.311332435620276 >100 1.6639030548787868 47.51266658988629 >500 0.007550715124103129 0.801101623272666 >1k 0.001372857295291478 0.27006018994305203 >5k 2.2880954921524632E-4 0.2970277388248297 >10k+ 2.2880954921524632E-4 0.43555861403635826 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11322 0.43268916584086814 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 7721 0.29507092823329295 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.011350351727145188 0.0 2 0.0 0.0 0.0 0.043337706594554354 0.0 3 0.0 0.0 0.0 0.06034412584903115 0.0 4 0.0 0.0 0.0 0.08621681311932507 0.0 5 0.0 0.0 0.0 0.14766922247033334 0.0 6 0.0 0.0 0.0 0.2119878822574894 0.0 7 0.0 0.0 0.0 0.2574275058385521 0.0 8 0.0 0.0 0.0 0.4050967283088855 0.0 9 0.0 0.0 0.0 0.4706765382879466 0.0 10 0.0 0.0 0.0 0.5913265733135269 0.0 11 0.0 0.0 0.0 0.6686389017445529 0.0 12 0.0 0.0 0.0 0.7623079659978622 0.0 13 0.0 0.0 0.0 0.797352654663829 0.0 14 0.0 0.0 0.0 0.8124100236217252 0.0 15 0.0 0.0 0.0 0.8357221938357272 0.0 16 0.0 0.0 0.0 0.8876586517387248 0.0 17 0.0 0.0 0.0 0.9474677441730084 0.0 18 0.0 0.0 0.0 1.0512642266340397 0.0 19 0.0 0.0 0.0 1.0890987323911905 0.0 20 0.0 0.0 0.0 1.13602880619905 0.0 21 0.0 0.0 0.0 1.187315580669854 0.0 22 0.0 0.0 0.0 1.2397488553151175 0.0 23 0.0 0.0 0.0 1.3006662312513781 0.0 24 0.0 0.0 0.0 1.3449211379854997 0.0 25 0.0 0.0 0.0 1.3812269768433716 0.0 26 0.0 0.0 0.0 1.4221188163990799 0.0 27 0.0 0.0 0.0 1.464539322854067 0.0 28 0.0 0.0 0.0 1.5073419960338736 0.0 29 0.0 0.0 0.0 1.55595360343094 0.0 30 0.0 0.0 0.0 1.6181321295591058 0.0 31 0.0 0.0 0.0 1.6772151052162318 0.0 32 0.0 0.0 0.0 1.7315209968131118 0.0 33 0.0 0.0 0.0 1.789113522243441 0.0 34 0.0 0.0 0.0 1.849648731454882 0.0 35 0.0 0.0 0.0 1.9220311091357338 0.0 36 0.0 0.0 0.0 1.9878020024772047 0.0 37 0.0 0.0 0.0 2.054757612665617 0.0 38 0.0 0.0 0.0 2.120413855989642 0.0 39 0.0 0.0 0.0 2.1889363497498144 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGATA 25 3.8921768E-5 45.0 37 CGTTTTT 11800 0.0 43.074154 1 CGACGGT 660 0.0 42.61364 28 GACGGTC 685 0.0 41.058395 29 CGATCGA 55 6.184564E-11 40.90909 41 CTCACGA 710 0.0 40.88028 24 CGGTCTA 690 0.0 40.76087 31 ACGGTCT 695 0.0 40.467625 30 ATAGGGC 935 0.0 39.46524 4 TCCGCGT 40 3.4604818E-7 39.375 32 CCGATCG 40 3.4604818E-7 39.375 40 TAGCCGT 145 0.0 38.793102 44 TCGTTAG 105 0.0 38.57143 1 GTCGATC 35 6.251348E-6 38.571426 26 AAGGGAT 4135 0.0 38.415962 5 CTAGACG 170 0.0 38.382355 1 TACGGGA 995 0.0 38.21608 4 TAGGGCG 875 0.0 38.05714 5 AGGGCGA 1970 0.0 37.918777 6 TAAGGGA 3335 0.0 37.511242 4 >>END_MODULE