SRR1545047_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545047_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	3554788
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	16436	0.46236231246420323	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14267	0.4013460155711114	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3686	0.1036911343236221	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGAAC	65	0.0	45.000004	12
TAGCCGT	130	0.0	45.000004	44
AACCGTA	20	7.035282E-4	45.0	41
GTCGATC	45	3.8562575E-10	45.0	9
CGAGTTA	25	3.8924598E-5	45.0	45
ACGTTAG	165	0.0	45.0	1
ATTACGC	45	3.8562575E-10	45.0	27
CCGTACA	25	3.8924598E-5	45.0	11
ATGCGTA	25	3.8924598E-5	45.0	14
TATACGT	35	1.212884E-7	45.0	15
TACGTAT	35	1.212884E-7	45.0	17
ATAGCCG	30	2.1667893E-6	44.999996	1
ATTCGTT	30	2.1667893E-6	44.999996	33
TACGTAG	260	0.0	43.269234	1
CGTTTTT	17200	0.0	43.1032	1
CGACGGT	345	0.0	43.04348	28
CCACGCG	110	0.0	42.954544	40
CGTGCCG	105	0.0	42.857143	41
CTCGCGC	1070	0.0	42.476635	33
CTAACCG	80	0.0	42.1875	14