##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545047_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3554788 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.895948787944597 31.0 31.0 33.0 28.0 34.0 2 31.167423486295103 31.0 31.0 34.0 28.0 34.0 3 31.24401933392371 31.0 31.0 34.0 28.0 34.0 4 35.07306708585716 35.0 35.0 37.0 32.0 37.0 5 34.90807187376575 35.0 35.0 37.0 32.0 37.0 6 34.972713422009974 36.0 35.0 37.0 32.0 37.0 7 35.549572013858494 37.0 35.0 37.0 35.0 37.0 8 35.485527125668256 37.0 35.0 37.0 35.0 37.0 9 37.17212250069484 39.0 37.0 39.0 34.0 39.0 10 36.5998526494407 39.0 35.0 39.0 32.0 39.0 11 36.22152657204874 38.0 35.0 39.0 31.0 39.0 12 34.96257104502435 35.0 34.0 39.0 30.0 39.0 13 34.1743240384518 35.0 33.0 39.0 25.0 39.0 14 35.06844824501489 36.0 33.0 40.0 25.0 41.0 15 35.65378779268975 36.0 33.0 40.0 30.0 41.0 16 35.9023069730178 36.0 34.0 40.0 31.0 41.0 17 35.80387044178162 36.0 34.0 40.0 31.0 41.0 18 35.77603052558971 36.0 34.0 40.0 30.0 41.0 19 35.64687598810393 36.0 34.0 40.0 30.0 41.0 20 35.38612119766355 35.0 34.0 40.0 29.0 41.0 21 35.19841155084354 35.0 34.0 40.0 29.0 41.0 22 35.062879699155054 35.0 33.0 40.0 29.0 41.0 23 35.02468754817446 35.0 34.0 40.0 29.0 41.0 24 34.964454139037265 35.0 34.0 40.0 29.0 41.0 25 34.88999878473766 35.0 34.0 39.0 29.0 41.0 26 34.665434619448476 35.0 34.0 39.0 27.0 41.0 27 34.506072373373605 35.0 33.0 39.0 27.0 41.0 28 34.6124593084032 35.0 33.0 39.0 27.0 41.0 29 34.709938539232155 35.0 34.0 39.0 28.0 41.0 30 34.648403786667444 35.0 34.0 39.0 27.0 41.0 31 34.398556538392725 35.0 33.0 39.0 27.0 41.0 32 34.06525874398136 35.0 33.0 39.0 24.0 41.0 33 33.738333481490315 35.0 33.0 39.0 23.0 41.0 34 33.580925501042536 35.0 33.0 39.0 23.0 41.0 35 33.38907045933541 35.0 33.0 39.0 23.0 41.0 36 33.123652380957736 35.0 32.0 39.0 21.0 41.0 37 33.07711374067877 35.0 32.0 39.0 21.0 41.0 38 33.128197518389285 35.0 32.0 39.0 22.0 41.0 39 33.09441125602989 35.0 32.0 39.0 21.0 41.0 40 32.92836281657303 35.0 32.0 39.0 21.0 41.0 41 32.92214050458143 35.0 32.0 39.0 21.0 41.0 42 32.89676346381275 35.0 32.0 39.0 21.0 41.0 43 32.73706505141797 35.0 32.0 39.0 20.0 41.0 44 32.71004543730878 35.0 31.0 38.0 20.0 41.0 45 32.67865256662282 35.0 31.0 38.0 20.0 40.0 46 32.62282307693173 35.0 31.0 38.0 20.0 40.0 47 32.49903707337822 35.0 31.0 38.0 20.0 40.0 48 32.556760628200614 35.0 31.0 38.0 20.0 40.0 49 32.626106535748406 35.0 31.0 38.0 20.0 40.0 50 32.47446261211639 35.0 31.0 38.0 20.0 40.0 51 32.281356018980595 35.0 31.0 38.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 1.0 11 7.0 12 4.0 13 8.0 14 44.0 15 160.0 16 496.0 17 1445.0 18 3253.0 19 6250.0 20 11069.0 21 18309.0 22 28109.0 23 39936.0 24 53146.0 25 70232.0 26 85793.0 27 94795.0 28 101348.0 29 110326.0 30 128063.0 31 153878.0 32 189803.0 33 242651.0 34 409750.0 35 557087.0 36 223806.0 37 251895.0 38 333781.0 39 439174.0 40 166.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.81940076313975 22.406540136852044 28.176335691467397 15.59772340854082 2 31.285297463589952 25.735374373942975 30.00249241304967 12.976835749417406 3 28.153380736066396 25.192135227192168 33.28229419025832 13.37218984648311 4 25.194441975161386 27.26646427297493 32.543375301143136 14.995718450720549 5 23.640031416782097 31.530347238710156 30.741551957528834 14.088069386978914 6 19.398287605336805 40.515805724560785 29.477397808251855 10.608508861850552 7 83.30426455811148 5.36960291302885 9.544535426585215 1.7815971022744534 8 84.76156665320126 5.454136786778846 8.000505234067404 1.7837913259524898 9 80.947021313226 4.938212911712316 10.03983922529276 4.074926549768931 10 57.15319732147177 19.218530050174582 13.908311831816695 9.719960796536952 11 54.49253232541575 17.16462416324124 18.200297739274465 10.142545772068544 12 46.58592861233919 19.767507935775637 21.828840425926945 11.817723025958228 13 21.215976874007676 45.38622275083634 21.818825764011805 11.578974611144181 14 12.464062554503954 49.41521125873048 27.320279015232412 10.800447171533154 15 11.01410266941376 20.95767736360087 56.03864421732041 11.989575749664958 16 12.69394968138747 15.192664091360722 54.030760765480245 18.08262546177156 17 13.530173951301737 15.351463997290416 30.318741933414877 40.79962011799297 18 20.564770669868356 20.416716833746484 37.74604842820444 21.272464068180717 19 31.332670190177303 21.307684171320485 26.999753571802316 20.3598920666999 20 35.068195346670464 19.79350104703853 25.65964552597792 19.47865808031309 21 21.144270769452355 29.108486919613775 29.1922331233255 20.555009187608377 22 21.204499396307178 23.550124508128192 26.91538848448909 28.32998761107554 23 19.19217123496535 30.493435895473937 24.908686537706327 25.40570633185439 24 18.18929848981149 22.320824758044644 43.01091935721624 16.47895739492763 25 15.209739652547494 23.698206475322863 41.204004289425974 19.888049582703665 26 14.181773990460192 35.556944605416696 29.774377543752255 20.48690386037086 27 17.63044659765927 36.552221960915816 28.876743141925765 16.940588299499154 28 13.196398772585033 30.454755670380347 41.398952623897685 14.94989293313694 29 13.794324724849977 23.367272534958484 41.91653623225914 20.9218665079324 30 16.648137666718803 32.00303365489025 33.21309175118179 18.135736927209162 31 30.946627478206857 26.651153317722464 24.464468767195118 17.93775043687556 32 33.75101412517427 24.710531260935955 27.043131686052728 14.495322927837046 33 30.731115329521764 26.739344230935853 24.099833801621926 18.42970663792046 34 19.690203747734042 28.11613519568537 27.3052570223597 24.888404034220887 35 19.93595679967413 24.7591417547263 32.06601912687901 23.238882318720556 36 32.96953292291974 24.492965543936798 25.621809233068188 16.91569230007528 37 20.048537353001077 33.40517071622837 29.25167408014205 17.294617850628505 38 18.951172334327673 34.78342449676324 22.96994926279711 23.29545390611198 39 20.323771769230685 33.10278981475126 27.183955836466193 19.38948257955186 40 24.196323381309938 25.201474743360226 25.677368101838983 24.924833773490853 41 16.096627984566165 24.208363480466346 27.211355501368857 32.48365303359863 42 22.83826771104212 24.15243890774921 24.40457771321384 28.604715667994828 43 22.294606598199387 26.421181797620562 24.599441654467157 26.684769949712894 44 19.138553410217433 30.597267685161533 29.450307585149943 20.81387131947109 45 16.225355773677645 40.90286115515187 21.301326548868737 21.57045652230175 46 22.09805479257835 35.16004329934725 24.567344100407677 18.17455780766673 47 21.7434063578475 28.44304639264001 26.0315945704779 23.78195267903459 48 23.131421620642357 24.110045381046632 31.54100891529959 21.217524083011423 49 21.30028569917531 23.858497328110705 33.605098250584845 21.23611872212914 50 19.51697260146034 35.61571041648616 24.757538283576967 20.109778698476532 51 17.81383306121209 36.244664942044366 22.693505210437305 23.247996786306242 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4323.0 1 4983.0 2 5643.0 3 16802.0 4 27961.0 5 21962.5 6 15964.0 7 17674.0 8 19384.0 9 21544.0 10 23704.0 11 24172.0 12 24640.0 13 23725.0 14 22810.0 15 21170.0 16 19530.0 17 18891.0 18 18252.0 19 17171.0 20 16090.0 21 15873.5 22 15657.0 23 14220.0 24 12783.0 25 15244.5 26 18484.5 27 19263.0 28 22608.0 29 25953.0 30 31778.0 31 37603.0 32 47652.0 33 57701.0 34 59656.0 35 61611.0 36 73317.0 37 85023.0 38 110762.0 39 136501.0 40 213437.5 41 290374.0 42 352827.5 43 415281.0 44 410474.5 45 405668.0 46 382394.5 47 359121.0 48 322924.5 49 286728.0 50 268082.5 51 249437.0 52 233326.5 53 217216.0 54 191895.0 55 166574.0 56 155565.0 57 144556.0 58 130940.0 59 117324.0 60 104846.5 61 92369.0 62 77900.5 63 63432.0 64 49857.5 65 36283.0 66 27207.5 67 18132.0 68 14526.5 69 10921.0 70 8282.0 71 5643.0 72 4717.5 73 3792.0 74 2989.5 75 1536.0 76 885.0 77 624.0 78 363.0 79 284.5 80 206.0 81 167.5 82 129.0 83 82.0 84 35.0 85 25.5 86 16.0 87 12.0 88 8.0 89 5.0 90 2.0 91 2.0 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3554788.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.130646885073343 #Duplication Level Percentage of deduplicated Percentage of total 1 82.49548563392308 12.48210062739531 2 7.447080082719534 2.253582781129841 3 2.61386970546951 1.1864861855114945 4 1.3481440686520387 0.815931674119203 5 0.7911501959044016 0.5985307123643049 6 0.5459885520879846 0.495669599096146 7 0.3795966508868549 0.40204800183278255 8 0.28931314017505877 0.35019959705604325 9 0.21514933149737195 0.292981370620169 >10 1.765315367050418 5.952654831527774 >50 0.5603584352713691 6.158547152832375 >100 1.3656153602919465 50.12494117466218 >500 0.17110102330616972 15.630517824216955 >1k 0.011456819343223219 2.383294197790968 >5k 0.0 0.0 >10k+ 3.756334210892859E-4 0.8725142698444672 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 16436 0.46236231246420323 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14267 0.4013460155711114 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3686 0.1036911343236221 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.019832406320714483 0.0 2 0.0 0.0 0.0 0.07021515769716788 0.0 3 0.0 0.0 0.0 0.09783987118219145 0.0 4 0.0 0.0 0.0 0.15002301121754658 0.0 5 2.8131072795339695E-5 0.0 0.0 0.27635965914141714 0.0 6 2.8131072795339695E-5 0.0 0.0 0.374396447833176 0.0 7 5.626214559067939E-5 0.0 0.0 0.4602524820045527 0.0 8 5.626214559067939E-5 0.0 0.0 0.7012232515694325 0.0 9 5.626214559067939E-5 0.0 0.0 0.8047174683834872 0.0 10 5.626214559067939E-5 0.0 0.0 1.0418905431209962 0.0 11 8.439321838601908E-5 0.0 0.0 1.1637262193976126 0.0 12 8.439321838601908E-5 0.0 0.0 1.3507415913410308 0.0 13 1.1252429118135878E-4 0.0 0.0 1.4102388103031742 0.0 14 1.4065536397669847E-4 0.0 0.0 1.4354161204550033 0.0 15 1.4065536397669847E-4 0.0 0.0 1.478878627923803 0.0 16 1.6878643677203817E-4 0.0 0.0 1.5635531570377754 0.0 17 1.6878643677203817E-4 0.0 0.0 1.649212273699585 0.0 18 1.6878643677203817E-4 0.0 0.0 1.8207555556055663 0.0 19 1.6878643677203817E-4 0.0 0.0 1.8855414162532336 0.0 20 1.6878643677203817E-4 0.0 0.0 1.94858315038759 0.0 21 1.6878643677203817E-4 0.0 0.0 2.01232816134183 0.0 22 1.6878643677203817E-4 0.0 0.0 2.071347152066452 0.0 23 1.6878643677203817E-4 0.0 0.0 2.1442066306063823 0.0 24 1.6878643677203817E-4 0.0 0.0 2.1954051830939005 0.0 25 1.6878643677203817E-4 0.0 0.0 2.2358576657735987 0.0 26 1.6878643677203817E-4 0.0 0.0 2.2818519697939794 0.0 27 1.6878643677203817E-4 0.0 0.0 2.3315314443505493 0.0 28 1.6878643677203817E-4 0.0 0.0 2.3785384669915617 0.0 29 1.6878643677203817E-4 0.0 0.0 2.427992892965769 0.0 30 1.6878643677203817E-4 0.0 0.0 2.504931377061023 0.0 31 1.6878643677203817E-4 0.0 0.0 2.5749496172486235 0.0 32 2.2504858236271756E-4 0.0 0.0 2.633771690463679 0.0 33 2.2504858236271756E-4 0.0 0.0 2.6956037884678357 0.0 34 2.2504858236271756E-4 0.0 0.0 2.7602208626787306 0.0 35 2.2504858236271756E-4 0.0 0.0 2.8501277713326365 0.0 36 2.531796551580572E-4 0.0 0.0 2.92453445887631 0.0 37 2.531796551580572E-4 0.0 0.0 2.995199713738203 0.0 38 2.531796551580572E-4 0.0 0.0 3.0636144827764693 0.0 39 2.8131072795339695E-4 0.0 0.0 3.1331826257993445 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAAC 65 0.0 45.000004 12 TAGCCGT 130 0.0 45.000004 44 AACCGTA 20 7.035282E-4 45.0 41 GTCGATC 45 3.8562575E-10 45.0 9 CGAGTTA 25 3.8924598E-5 45.0 45 ACGTTAG 165 0.0 45.0 1 ATTACGC 45 3.8562575E-10 45.0 27 CCGTACA 25 3.8924598E-5 45.0 11 ATGCGTA 25 3.8924598E-5 45.0 14 TATACGT 35 1.212884E-7 45.0 15 TACGTAT 35 1.212884E-7 45.0 17 ATAGCCG 30 2.1667893E-6 44.999996 1 ATTCGTT 30 2.1667893E-6 44.999996 33 TACGTAG 260 0.0 43.269234 1 CGTTTTT 17200 0.0 43.1032 1 CGACGGT 345 0.0 43.04348 28 CCACGCG 110 0.0 42.954544 40 CGTGCCG 105 0.0 42.857143 41 CTCGCGC 1070 0.0 42.476635 33 CTAACCG 80 0.0 42.1875 14 >>END_MODULE