##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545046_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1918409 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.881705100424362 31.0 31.0 33.0 28.0 34.0 2 31.163887888349148 31.0 31.0 34.0 28.0 34.0 3 31.25003948584478 31.0 31.0 34.0 28.0 34.0 4 35.08793849486736 35.0 35.0 37.0 32.0 37.0 5 34.937906880128274 35.0 35.0 37.0 32.0 37.0 6 34.99206321488275 36.0 35.0 37.0 32.0 37.0 7 35.536901672166884 37.0 35.0 37.0 35.0 37.0 8 35.4572163704403 37.0 35.0 37.0 35.0 37.0 9 37.09535036585004 39.0 37.0 39.0 33.0 39.0 10 36.50617881796843 38.0 35.0 39.0 32.0 39.0 11 36.23301131302032 38.0 35.0 39.0 32.0 39.0 12 35.41483906716451 37.0 35.0 39.0 30.0 39.0 13 34.926080934774596 37.0 34.0 39.0 27.0 39.0 14 35.92321449701289 38.0 34.0 40.0 29.0 41.0 15 36.294341300525595 38.0 35.0 40.0 30.0 41.0 16 36.389733367597835 38.0 35.0 40.0 31.0 41.0 17 36.29333473727448 38.0 34.0 40.0 31.0 41.0 18 36.24608360365282 38.0 35.0 40.0 30.0 41.0 19 36.150772853963886 37.0 35.0 40.0 30.0 41.0 20 35.98222954542019 37.0 34.0 40.0 30.0 41.0 21 35.797413898704605 37.0 34.0 40.0 30.0 41.0 22 35.68013286009396 37.0 34.0 40.0 30.0 41.0 23 35.6515497998602 36.0 34.0 40.0 30.0 41.0 24 35.5681311962152 36.0 34.0 40.0 29.0 41.0 25 35.42821056406637 36.0 34.0 40.0 29.0 41.0 26 35.28490327140876 36.0 34.0 40.0 29.0 41.0 27 35.16515299917796 36.0 34.0 40.0 28.0 41.0 28 35.17792712607166 36.0 34.0 40.0 28.0 41.0 29 35.21536335578075 36.0 34.0 40.0 29.0 41.0 30 35.11092316601934 36.0 34.0 40.0 28.0 41.0 31 34.934179833393195 36.0 34.0 40.0 27.0 41.0 32 34.68823853516117 36.0 33.0 40.0 26.0 41.0 33 34.45749524736383 36.0 33.0 40.0 24.0 41.0 34 34.300389541541975 36.0 33.0 40.0 24.0 41.0 35 34.11102846160542 36.0 33.0 40.0 23.0 41.0 36 33.93327752319761 36.0 33.0 40.0 23.0 41.0 37 33.87841383146138 35.0 33.0 40.0 23.0 41.0 38 33.8521477953867 35.0 33.0 40.0 23.0 41.0 39 33.80318169900162 35.0 33.0 40.0 23.0 41.0 40 33.64604628105894 35.0 32.0 40.0 23.0 41.0 41 33.60819460292357 35.0 32.0 40.0 22.0 41.0 42 33.55886883349692 35.0 32.0 40.0 23.0 41.0 43 33.457776209348474 35.0 32.0 40.0 22.0 41.0 44 33.39767640789842 35.0 32.0 40.0 22.0 41.0 45 33.33342524977729 35.0 32.0 39.0 22.0 41.0 46 33.2804485383461 35.0 32.0 39.0 22.0 41.0 47 33.18900922587415 35.0 32.0 39.0 22.0 41.0 48 33.142677604202234 35.0 32.0 39.0 22.0 41.0 49 33.172587805832855 35.0 32.0 39.0 22.0 41.0 50 33.07260182786882 35.0 32.0 39.0 21.0 41.0 51 32.873722965227955 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 3.0 12 6.0 13 9.0 14 25.0 15 93.0 16 240.0 17 703.0 18 1678.0 19 3043.0 20 5130.0 21 8092.0 22 12154.0 23 17199.0 24 23564.0 25 32009.0 26 40334.0 27 46905.0 28 50746.0 29 56258.0 30 65250.0 31 78629.0 32 96090.0 33 120214.0 34 190155.0 35 245725.0 36 140844.0 37 167972.0 38 221306.0 39 293877.0 40 152.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.42816417145666 23.235086991355857 26.854805205772074 15.481943631415406 2 32.93056902881502 25.41225567644856 28.570549867103416 13.086625427633003 3 29.56825160849433 25.13009478166543 32.03540016753466 13.266253442305578 4 27.72755966011419 26.70608822206318 30.87996355313179 14.686388564690844 5 23.88604307006483 31.404825561181166 30.42859994922876 14.280531419525241 6 20.937506027129775 40.956073496319085 28.174596762212857 9.931823714338288 7 83.42089721222116 5.299182812424254 9.336226008114016 1.9436939672405624 8 84.05751849579521 4.89687027114656 8.862291617689449 2.183319615368777 9 78.5204823371867 6.900353365731708 11.09096131221236 3.4882029848692326 10 46.928991680084906 24.737112888857382 16.644260947483044 11.68963448357467 11 43.71111686819651 21.905547774223326 21.479465536285534 12.903869821294625 12 38.01686710185368 22.228158854550827 26.3751890238213 13.379785019774198 13 22.202251970252433 36.85647846731328 26.226784799278985 14.714484763155303 14 15.644734777620414 40.290574116364134 29.48172157240714 14.582969533608317 15 15.445090176286705 22.67373641387212 46.60059455517567 15.280578854665508 16 16.79735655952406 18.86234895686999 44.575114065874374 19.765180417731568 17 16.448004570453953 19.50600732169209 30.859634207304072 33.18635390054988 18 21.680204794702277 23.447815351158173 34.56348463753037 20.30849521660918 19 29.011175406287187 22.927331971440918 27.407815538813672 20.65367708345822 20 31.010644758234555 22.228575866772935 26.135198489998746 20.625580884993763 21 22.65022734985084 26.864657119519354 29.62241107084047 20.862704459789335 22 22.238740539686795 24.844545662577687 27.056639121271846 25.860074676463675 23 20.143723262349162 28.445706833110147 27.262330399826105 24.14823950471458 24 19.42171872629872 24.189471588175408 38.1551587800099 18.233650905515976 25 18.554333304316234 24.67122495776448 36.27005502997536 20.504386707943926 26 17.65077207206597 32.08752669529803 29.14342040722286 21.11828082541314 27 19.075650708477703 31.633556765006837 30.18230210554684 19.10849042096863 28 16.7598775860622 28.466765950326543 37.43185108076537 17.341505382845888 29 16.787661025360077 25.47673619129185 36.58964277169259 21.145960011655493 30 18.764403211202616 29.07596868029706 32.47070880088657 19.688919307613755 31 28.00085904517754 26.75440951329982 26.337293038137332 18.907438403385303 32 28.91208287700902 26.340264250219843 27.517958891977674 17.22969398079346 33 26.38723025173464 27.78990298731918 26.022344557391047 19.800522203555136 34 20.38413080839383 27.830822311613424 29.17824092776879 22.60680595222395 35 21.36708074242771 25.080053315012595 30.825804090785645 22.727061851774046 36 28.552357708914002 26.482048405736215 26.323271002168987 18.642322883180803 37 20.36786733173166 32.75902062594577 28.235897558862575 18.637214483459992 38 21.313807431053544 32.92066498853998 24.297008614951242 21.46851896545523 39 21.781173878979924 30.54406020822463 26.659487106242725 21.015278806552722 40 23.24796224371341 26.58207921251412 26.946339388524553 23.223619155247917 41 18.20013354816413 26.683934447763747 27.511651582118308 27.60428042195382 42 22.1494999241559 27.063676202519897 24.9987880582295 25.788035815094695 43 22.833139335772508 26.815241171199677 26.382278231597123 23.969341261430696 44 20.109424007080868 30.503974908374598 27.981780736016148 21.40482034852839 45 18.406971610329183 34.8497635280068 24.923569478666955 21.819695382997057 46 21.808748812166748 32.557603722668105 26.16339894151873 19.470248523646415 47 22.86577054215238 28.290161274264246 26.695558663454978 22.1485095201284 48 22.015639000859565 26.260197903575307 30.226974539840047 21.49718855572508 49 21.036285797241362 26.51791145683741 31.1359569309777 21.30984581494353 50 19.896382888111972 32.133710798896374 27.16605270304716 20.80385360994449 51 19.512314631551458 32.073869545024024 26.13733567763704 22.276480145787474 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1456.0 1 2464.0 2 3472.0 3 12597.5 4 21723.0 5 16181.0 6 10639.0 7 10976.0 8 11313.0 9 11686.5 10 12060.0 11 12134.5 12 12209.0 13 11834.5 14 11460.0 15 10601.0 16 9742.0 17 9135.0 18 8528.0 19 8491.0 20 8454.0 21 8594.0 22 8734.0 23 9133.5 24 9533.0 25 10879.5 26 13060.5 27 13895.0 28 19108.0 29 24321.0 30 27441.5 31 30562.0 32 37977.0 33 45392.0 34 45617.0 35 45842.0 36 48944.5 37 52047.0 38 61498.5 39 70950.0 40 98104.5 41 125259.0 42 150582.0 43 175905.0 44 182146.5 45 188388.0 46 178425.5 47 168463.0 48 156667.0 49 144871.0 50 140243.0 51 135615.0 52 125288.5 53 114962.0 54 105656.0 55 96350.0 56 92862.5 57 89375.0 58 84598.5 59 79822.0 60 72959.5 61 66097.0 62 54642.5 63 43188.0 64 35222.0 65 27256.0 66 21700.5 67 16145.0 68 12600.5 69 9056.0 70 7338.0 71 5620.0 72 4519.0 73 3418.0 74 2845.5 75 1556.0 76 839.0 77 650.0 78 461.0 79 372.5 80 284.0 81 207.5 82 131.0 83 85.0 84 39.0 85 28.0 86 17.0 87 14.0 88 11.0 89 7.0 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1918409.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.830791338329934 #Duplication Level Percentage of deduplicated Percentage of total 1 80.88914557070166 15.23206621777678 2 6.2054621794598805 2.3370752691861427 3 2.332172902782529 1.317499838916151 4 1.2749019039741887 0.9602964692230999 5 0.8583028429725572 0.8081260870555795 6 0.6039340469044338 0.6823533611622334 7 0.4414943797270034 0.5819581979179222 8 0.3831449409924316 0.5771937948932173 9 0.2929904316526632 0.49655175143206676 >10 3.963051143600215 17.727419514303048 >50 1.4414507218781147 19.782145134747093 >100 1.3028137748858408 37.01355634470044 >500 0.008908128374848135 1.099477442095488 >1k 0.0016702740702840254 0.5043421603128011 >5k 2.783790117140042E-4 0.2718027337305762 >10k+ 2.783790117140042E-4 0.608135682547428 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11601 0.6047198485828621 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5185 0.27027604645307646 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2578 0.13438218857396936 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2314 0.12062078524443953 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01798365207836285 0.0 2 0.0 0.0 0.0 0.06265608637157144 0.0 3 0.0 0.0 0.0 0.08903210941983696 0.0 4 0.0 0.0 0.0 0.12943016843644917 0.0 5 0.0 0.0 0.0 0.2234664245215697 0.0 6 0.0 0.0 0.0 0.3295960350477922 0.0 7 0.0 0.0 0.0 0.40851559808153526 0.0 8 5.2126527763370585E-5 0.0 0.0 0.6395924956565571 0.0 9 5.2126527763370585E-5 0.0 0.0 0.7364435842408996 0.0 10 5.2126527763370585E-5 0.0 0.0 0.906428191277251 0.0 11 5.2126527763370585E-5 0.0 0.0 1.013600332358741 0.0 12 5.2126527763370585E-5 0.0 0.0 1.1350551420473944 0.0 13 5.2126527763370585E-5 0.0 0.0 1.1842625842560164 0.0 14 5.2126527763370585E-5 0.0 0.0 1.2013079588346385 0.0 15 5.2126527763370585E-5 0.0 0.0 1.2320626102150272 0.0 16 5.2126527763370585E-5 0.0 0.0 1.2989409453354317 0.0 17 5.2126527763370585E-5 0.0 0.0 1.3732212473982346 0.0 18 5.2126527763370585E-5 0.0 0.0 1.4982727875025608 0.0 19 5.2126527763370585E-5 0.0 0.0 1.5442483849898536 0.0 20 5.2126527763370585E-5 0.0 0.0 1.5965834188642776 0.0 21 5.2126527763370585E-5 0.0 0.0 1.653609840237405 0.0 22 5.2126527763370585E-5 0.0 0.0 1.7113660329992197 0.0 23 5.2126527763370585E-5 0.0 0.0 1.7773582171476467 0.0 24 5.2126527763370585E-5 0.0 0.0 1.8329772222711633 0.0 25 5.2126527763370585E-5 0.0 0.0 1.8780666687864789 0.0 26 1.0425305552674117E-4 0.0 0.0 1.9209146746079695 0.0 27 1.0425305552674117E-4 0.0 0.0 1.9690795862613237 0.0 28 1.0425305552674117E-4 0.0 0.0 2.015941334720594 0.0 29 1.0425305552674117E-4 0.0 0.0 2.072081605121744 0.0 30 1.0425305552674117E-4 0.0 0.0 2.140002470797416 0.0 31 1.0425305552674117E-4 0.0 0.0 2.2059946549458433 0.0 32 1.0425305552674117E-4 0.0 0.0 2.265888035345956 0.0 33 1.0425305552674117E-4 0.0 0.0 2.331411080744513 0.0 34 1.0425305552674117E-4 0.0 0.0 2.3946405589214814 0.0 35 1.0425305552674117E-4 0.0 0.0 2.4738207545940414 0.0 36 1.0425305552674117E-4 0.0 0.0 2.54632875471289 0.0 37 1.0425305552674117E-4 0.0 0.0 2.618993134415028 0.0 38 1.5637958329011174E-4 0.0 0.0 2.687174632729517 0.0 39 1.5637958329011174E-4 0.0 0.0 2.7581188370154646 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 40 6.8193913E-9 45.000004 1 AACGCGT 20 7.034468E-4 45.000004 24 CTATTCG 20 7.034468E-4 45.000004 1 ACCGTAG 20 7.034468E-4 45.000004 25 AACTACG 20 7.034468E-4 45.000004 26 TATAGCG 100 0.0 45.0 1 TACGTAA 25 3.891786E-5 45.0 28 CGCTTAT 25 3.891786E-5 45.0 11 TACCGGT 35 1.212502E-7 45.0 26 CGTTTTT 10125 0.0 42.533333 1 GCTACGA 125 0.0 41.4 10 GGTCGGA 115 0.0 41.08696 8 GCCGATT 100 0.0 40.5 9 GATTCGC 50 1.0822987E-9 40.5 13 TCACGAC 340 0.0 40.36765 25 TCGCAAT 45 1.929402E-8 40.000004 16 TCGACAG 45 1.929402E-8 40.000004 1 AATACGG 85 0.0 39.705883 2 AGGGTAC 845 0.0 39.674557 6 CGACGGT 360 0.0 39.375004 28 >>END_MODULE