SRR1545045_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545045_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2424875
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11470	0.4730140728903552	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	11316	0.4666632300634054	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2445	0.10082993968761277	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACGTAT	30	2.1665019E-6	45.000004	19
CACGTCA	30	2.1665019E-6	45.000004	11
CCTTACG	20	7.0348376E-4	45.0	39
CGTATGT	20	7.0348376E-4	45.0	16
GTCGAGT	25	3.892091E-5	45.0	30
CAAGTCG	20	7.0348376E-4	45.0	1
GCGCGTT	45	3.8562575E-10	45.0	2
CTATACG	95	0.0	45.0	1
CGTAGAT	20	7.0348376E-4	45.0	16
CGTAGAC	20	7.0348376E-4	45.0	44
GTCACGA	20	7.0348376E-4	45.0	42
GTCGTAC	50	2.1827873E-11	45.0	24
CAAATCG	35	1.2126839E-7	45.0	37
GAACGTA	25	3.892091E-5	45.0	34
ACGCTTA	25	3.892091E-5	45.0	37
TATAGCG	190	0.0	45.0	1
ACGTATG	40	6.8212103E-9	45.0	1
CACGTTA	35	1.2126839E-7	45.0	39
TAGTCGA	50	2.1827873E-11	45.0	11
TAATCGC	20	7.0348376E-4	45.0	42