##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545045_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2424875 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.912450744883756 31.0 31.0 33.0 28.0 34.0 2 31.17871519150472 31.0 31.0 34.0 28.0 34.0 3 31.257156760657764 31.0 31.0 34.0 28.0 34.0 4 35.07661714521367 35.0 35.0 37.0 32.0 37.0 5 34.9442672302696 35.0 35.0 37.0 32.0 37.0 6 35.00734635805969 37.0 35.0 37.0 32.0 37.0 7 35.5777852466622 37.0 35.0 37.0 35.0 37.0 8 35.5112601680499 37.0 35.0 37.0 35.0 37.0 9 37.224710139697926 39.0 37.0 39.0 34.0 39.0 10 36.62823197072014 39.0 35.0 39.0 32.0 39.0 11 36.27585710603639 38.0 35.0 39.0 32.0 39.0 12 35.007286148770554 35.0 34.0 39.0 30.0 39.0 13 34.265263570287125 35.0 33.0 39.0 25.0 39.0 14 35.17525398216403 36.0 33.0 40.0 25.0 41.0 15 35.716548688076706 36.0 33.0 40.0 30.0 41.0 16 35.93850445899273 36.0 34.0 40.0 31.0 41.0 17 35.87640517552451 36.0 34.0 40.0 31.0 41.0 18 35.81683138306098 36.0 34.0 40.0 30.0 41.0 19 35.67876653435744 36.0 34.0 40.0 30.0 41.0 20 35.48414248157121 35.0 34.0 40.0 30.0 41.0 21 35.26784927058096 35.0 34.0 40.0 29.0 41.0 22 35.152204959018505 35.0 34.0 40.0 29.0 41.0 23 35.195894221351615 35.0 34.0 40.0 29.0 41.0 24 35.07439888654054 35.0 34.0 40.0 29.0 41.0 25 34.95703943502242 35.0 34.0 40.0 29.0 41.0 26 34.799332336718386 35.0 34.0 39.0 29.0 41.0 27 34.660436929738644 35.0 33.0 39.0 27.0 41.0 28 34.74029011804732 35.0 34.0 40.0 27.0 41.0 29 34.838352904788906 35.0 34.0 40.0 29.0 41.0 30 34.73793412031548 36.0 34.0 39.0 28.0 41.0 31 34.49056178153513 35.0 33.0 39.0 27.0 41.0 32 34.19202226918913 35.0 33.0 39.0 25.0 41.0 33 33.931754832723335 35.0 33.0 39.0 24.0 41.0 34 33.79524676529718 35.0 33.0 39.0 23.0 41.0 35 33.59667529254085 35.0 33.0 39.0 23.0 41.0 36 33.357603587813806 35.0 33.0 39.0 22.0 41.0 37 33.3038808185989 35.0 32.0 39.0 22.0 41.0 38 33.3252889324192 35.0 32.0 39.0 23.0 41.0 39 33.32753482138254 35.0 32.0 39.0 23.0 41.0 40 33.10887447806588 35.0 32.0 39.0 21.0 41.0 41 33.12347688025156 35.0 32.0 39.0 21.0 41.0 42 33.103507603484715 35.0 32.0 39.0 22.0 41.0 43 32.93774112067632 35.0 32.0 39.0 21.0 41.0 44 32.90381194906954 35.0 32.0 39.0 21.0 41.0 45 32.85308479818547 35.0 32.0 39.0 21.0 41.0 46 32.8196657559668 35.0 32.0 38.0 21.0 40.0 47 32.747998556626634 35.0 32.0 38.0 21.0 40.0 48 32.748650961389764 35.0 32.0 38.0 21.0 40.0 49 32.818953141914534 35.0 32.0 38.0 20.0 40.0 50 32.66923078509201 35.0 32.0 38.0 20.0 40.0 51 32.46508170524254 35.0 31.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 0.0 12 5.0 13 15.0 14 31.0 15 119.0 16 350.0 17 1045.0 18 2378.0 19 4490.0 20 7654.0 21 11790.0 22 17218.0 23 24081.0 24 33072.0 25 44491.0 26 56071.0 27 63600.0 28 67484.0 29 74902.0 30 86645.0 31 103840.0 32 128289.0 33 165054.0 34 278341.0 35 376968.0 36 150304.0 37 174250.0 38 232298.0 39 319918.0 40 169.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.33392442909428 22.267704520851588 28.139801020671168 16.25857002938296 2 32.564647662250636 25.488159183463065 29.176143100159802 12.771050054126501 3 28.791092324346618 24.576730759317492 32.84482705294087 13.78734986339502 4 25.071684107428215 26.985432238775193 32.864580648487035 15.078303005309552 5 22.29549976802928 31.86667353987319 31.895664724985824 13.942161967111707 6 19.571441826898294 40.38224650755193 29.544162070209808 10.502149595339965 7 84.0652404763132 5.318830867570493 8.88825197175112 1.7276766843651734 8 85.48700448476725 4.339811330480953 8.389215938965926 1.7839682457858652 9 81.7967111706789 5.441187690087118 9.907108613846075 2.8549925253879067 10 55.928037527707616 20.173452239806174 14.70174751275839 9.19676271972782 11 53.14607969482963 18.20485592040827 19.19958760760864 9.449476777153462 12 46.58821588741688 20.801030980978403 21.950327336460642 10.660425795144079 13 20.163678540130935 46.88670550028352 21.32596525594103 11.623650703644518 14 12.996381256765813 48.03006340533017 27.157606062168156 11.815949275735862 15 11.540718593741946 21.89745863188824 54.63399144285788 11.927831331511934 16 13.05155935872983 16.299438115366772 52.46979741223774 18.179205113665653 17 13.058611268622094 16.671127377699882 30.270467549873704 39.999793803804316 18 20.78251456260632 21.459126759111292 38.113263570287124 19.64509510799526 19 30.68954069797412 22.85255941027888 26.24081653693489 20.217083354812104 20 33.059559771122224 21.362544461054693 26.212237744213617 19.365658023609463 21 20.233744007423063 28.727047785968352 29.83625960101036 21.202948605598227 22 21.541399041187688 24.32162482602196 26.581988762307336 27.554987370483015 23 17.242290839734007 30.898128769524202 25.76384349708748 26.095736893654315 24 18.1281096963761 21.69493272849116 44.254446105469356 15.922511469663384 25 15.227712768699417 24.0503531109851 40.594216196711166 20.127717923604312 26 14.592216093613072 36.372060415485336 28.54881179442239 20.486911696479197 27 15.961028919016442 36.06676632816124 30.806742615598743 17.16546213722357 28 12.593020258776225 29.728707665343574 42.7497087478736 14.928563328006597 29 13.339945358008146 24.933945048713852 41.22373318212279 20.502376411155215 30 16.181287695242023 32.05971441826898 34.44602299087582 17.312974895613177 31 30.727439558740144 26.505984844579615 25.186947780813444 17.579627815866797 32 31.341533068714885 26.34972936749317 27.469127274601785 14.839610289190164 33 28.696819423681635 27.6071550079901 25.129460281457806 18.566565286870457 34 18.121057786483842 29.1252126398268 28.239971132532602 24.51375844115676 35 19.570204649724214 24.756987473581113 33.06908603536265 22.603721841332028 36 32.07909686066292 24.348512809938658 26.258095778132894 17.31429455126553 37 19.222970256198774 33.982741378421565 30.126088973658437 16.668199391721224 38 19.681426877674106 34.382102170214964 23.81285633280066 22.123614619310274 39 19.841888757152432 32.38138048353008 27.88341667096242 19.89331408835507 40 24.065735347182844 25.626434352286196 25.66029176761689 24.64753853291407 41 15.681426877674106 23.907624104335277 29.144760039177275 31.266188978813343 42 23.10176813237796 24.775297695757516 23.767616887468428 28.355317284396104 43 22.341687715861642 26.27158100933038 25.798979328831383 25.587751945976596 44 18.3598329810815 31.289489148925202 29.126284860044333 21.224393009948965 45 15.547358111242849 41.8480952626424 21.93432651167586 20.67022011443889 46 21.19375225527089 34.711191298520546 25.58705087891128 18.508005567297285 47 21.587628228259188 28.961451621217588 25.977050363420794 23.473869787102426 48 22.83540388679829 24.250817052425383 32.17419454611063 20.739584514665705 49 21.08071550079901 24.002103201195936 32.70164441466055 22.2155368833445 50 19.40161864013609 35.57119439146348 26.00472189288108 19.022465075519357 51 17.585689984019794 36.52646012681066 23.284911593381104 22.602938295788444 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3243.0 1 3650.5 2 4058.0 3 12515.0 4 20972.0 5 16490.5 6 12009.0 7 13147.5 8 14286.0 9 15793.0 10 17300.0 11 17387.5 12 17475.0 13 16761.0 14 16047.0 15 15166.5 16 14286.0 17 13652.0 18 13018.0 19 12569.5 20 12121.0 21 11726.0 22 11331.0 23 11568.0 24 11805.0 25 13298.0 26 15686.0 27 16581.0 28 20855.5 29 25130.0 30 28044.0 31 30958.0 32 38314.5 33 45671.0 34 48037.0 35 50403.0 36 58458.5 37 66514.0 38 77404.5 39 88295.0 40 145985.0 41 203675.0 42 239515.5 43 275356.0 44 277641.5 45 279927.0 46 257426.0 47 234925.0 48 216249.0 49 197573.0 50 183541.5 51 169510.0 52 156246.0 53 142982.0 54 125048.0 55 107114.0 56 97989.5 57 88865.0 58 80353.5 59 71842.0 60 64807.5 61 57773.0 62 47721.5 63 37670.0 64 30377.5 65 23085.0 66 17531.0 67 11977.0 68 9034.5 69 6092.0 70 5214.5 71 4337.0 72 3513.0 73 2689.0 74 2227.5 75 1240.5 76 715.0 77 549.5 78 384.0 79 251.5 80 119.0 81 119.5 82 120.0 83 86.0 84 52.0 85 33.0 86 14.0 87 14.5 88 15.0 89 8.5 90 2.0 91 1.0 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2424875.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.047002300301738 #Duplication Level Percentage of deduplicated Percentage of total 1 83.09109480332788 13.333629894435925 2 6.761211327559634 2.1699434745235124 3 2.224285204223305 1.070793293660955 4 1.1791337157238575 0.756862457943363 5 0.7185191458887822 0.5765039193444064 6 0.49661411585909654 0.47815007157319417 7 0.3567478248323302 0.4007313215998431 8 0.255904480567274 0.32851998306564545 9 0.20349609946712457 0.2938952138626242 >10 2.157089285164476 8.137150121757285 >50 0.8110594280288504 9.485737396438298 >100 1.7091880388426954 58.00437618357229 >500 0.03229758198794091 3.356252828967065 >1k 0.0028421872149387998 0.6626927367954415 >5k 0.0 0.0 >10k+ 5.167613118070545E-4 0.944761102460172 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11470 0.4730140728903552 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 11316 0.4666632300634054 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2445 0.10082993968761277 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.123923913603794E-5 0.0 0.0 0.013485231197484406 0.0 2 4.123923913603794E-5 0.0 0.0 0.04878601989793288 0.0 3 4.123923913603794E-5 0.0 0.0 0.07089025207484922 0.0 4 4.123923913603794E-5 0.0 0.0 0.1047889066446724 0.0 5 4.123923913603794E-5 0.0 0.0 0.17398834991494408 0.0 6 4.123923913603794E-5 0.0 0.0 0.24867261199030877 0.0 7 4.123923913603794E-5 0.0 0.0 0.2986958090623228 0.0 8 4.123923913603794E-5 0.0 0.0 0.4494664673436775 0.0 9 4.123923913603794E-5 0.0 0.0 0.5112840868085984 0.0 10 4.123923913603794E-5 0.0 0.0 0.6109593278004021 0.0 11 4.123923913603794E-5 0.0 0.0 0.6939739161812465 0.0 12 4.123923913603794E-5 0.0 0.0 0.7768235476055467 0.0 13 8.247847827207588E-5 0.0 0.0 0.8158358678282386 0.0 14 8.247847827207588E-5 0.0 0.0 0.8285375534821382 0.0 15 8.247847827207588E-5 0.0 0.0 0.8550956234857466 4.123923913603794E-5 16 8.247847827207588E-5 0.0 0.0 0.9053250167534409 4.123923913603794E-5 17 8.247847827207588E-5 0.0 0.0 0.9644620856745193 4.123923913603794E-5 18 8.247847827207588E-5 0.0 0.0 1.0744058972111965 4.123923913603794E-5 19 8.247847827207588E-5 0.0 0.0 1.107685963193979 4.123923913603794E-5 20 8.247847827207588E-5 0.0 0.0 1.1483066137429765 4.123923913603794E-5 21 8.247847827207588E-5 0.0 0.0 1.1958554564668282 4.123923913603794E-5 22 8.247847827207588E-5 0.0 0.0 1.242332078973143 4.123923913603794E-5 23 8.247847827207588E-5 0.0 0.0 1.3006443631115006 4.123923913603794E-5 24 8.247847827207588E-5 0.0 0.0 1.3450177844218774 4.123923913603794E-5 25 8.247847827207588E-5 0.0 0.0 1.3768957162740347 4.123923913603794E-5 26 8.247847827207588E-5 0.0 0.0 1.4137635960616526 4.123923913603794E-5 27 8.247847827207588E-5 0.0 0.0 1.4494767771534616 4.123923913603794E-5 28 8.247847827207588E-5 0.0 0.0 1.4875818341151605 4.123923913603794E-5 29 8.247847827207588E-5 0.0 0.0 1.528161245425022 4.123923913603794E-5 30 8.247847827207588E-5 0.0 0.0 1.5887416877158616 4.123923913603794E-5 31 8.247847827207588E-5 0.0 0.0 1.6442909428321046 4.123923913603794E-5 32 8.247847827207588E-5 0.0 0.0 1.6927470488169494 4.123923913603794E-5 33 8.247847827207588E-5 0.0 0.0 1.742316614258467 4.123923913603794E-5 34 8.247847827207588E-5 0.0 0.0 1.797700912418166 4.123923913603794E-5 35 8.247847827207588E-5 0.0 0.0 1.868549925253879 4.123923913603794E-5 36 1.237177174081138E-4 0.0 0.0 1.9238105056961698 4.123923913603794E-5 37 1.237177174081138E-4 0.0 0.0 1.9822052683127995 4.123923913603794E-5 38 1.237177174081138E-4 0.0 0.0 2.040146399298933 4.123923913603794E-5 39 1.237177174081138E-4 0.0 0.0 2.096767874632713 4.123923913603794E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACGTAT 30 2.1665019E-6 45.000004 19 CACGTCA 30 2.1665019E-6 45.000004 11 CCTTACG 20 7.0348376E-4 45.0 39 CGTATGT 20 7.0348376E-4 45.0 16 GTCGAGT 25 3.892091E-5 45.0 30 CAAGTCG 20 7.0348376E-4 45.0 1 GCGCGTT 45 3.8562575E-10 45.0 2 CTATACG 95 0.0 45.0 1 CGTAGAT 20 7.0348376E-4 45.0 16 CGTAGAC 20 7.0348376E-4 45.0 44 GTCACGA 20 7.0348376E-4 45.0 42 GTCGTAC 50 2.1827873E-11 45.0 24 CAAATCG 35 1.2126839E-7 45.0 37 GAACGTA 25 3.892091E-5 45.0 34 ACGCTTA 25 3.892091E-5 45.0 37 TATAGCG 190 0.0 45.0 1 ACGTATG 40 6.8212103E-9 45.0 1 CACGTTA 35 1.2126839E-7 45.0 39 TAGTCGA 50 2.1827873E-11 45.0 11 TAATCGC 20 7.0348376E-4 45.0 42 >>END_MODULE