##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545043_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2234915 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.953514115749368 31.0 31.0 33.0 28.0 34.0 2 31.227052035536026 31.0 31.0 34.0 28.0 34.0 3 31.295312797130986 31.0 31.0 34.0 28.0 34.0 4 35.12275276688375 35.0 35.0 37.0 32.0 37.0 5 34.97676645420519 35.0 35.0 37.0 32.0 37.0 6 35.03372343019757 37.0 35.0 37.0 32.0 37.0 7 35.58701203401472 37.0 35.0 37.0 35.0 37.0 8 35.5281802663636 37.0 35.0 37.0 35.0 37.0 9 37.240564853696895 39.0 37.0 39.0 34.0 39.0 10 36.65873198757 39.0 35.0 39.0 32.0 39.0 11 36.283655083079225 38.0 35.0 39.0 32.0 39.0 12 35.0467449545061 35.0 34.0 39.0 30.0 39.0 13 34.364574044203025 35.0 33.0 39.0 25.0 39.0 14 35.26153746339346 36.0 33.0 40.0 26.0 41.0 15 35.778811274701724 36.0 33.0 40.0 30.0 41.0 16 35.99069315835278 36.0 34.0 40.0 31.0 41.0 17 35.91022656342635 36.0 34.0 40.0 31.0 41.0 18 35.853854397147096 36.0 34.0 40.0 30.0 41.0 19 35.73484629169342 36.0 34.0 40.0 30.0 41.0 20 35.57760585973068 36.0 34.0 40.0 30.0 41.0 21 35.35315795007864 35.0 34.0 40.0 29.0 41.0 22 35.216597946678064 35.0 34.0 40.0 29.0 41.0 23 35.253490624923096 35.0 34.0 40.0 29.0 41.0 24 35.13828758588134 35.0 34.0 40.0 29.0 41.0 25 35.02831382849012 35.0 34.0 40.0 29.0 41.0 26 34.85309418926447 35.0 34.0 40.0 29.0 41.0 27 34.75902260264932 35.0 34.0 40.0 28.0 41.0 28 34.82250018457078 35.0 34.0 40.0 28.0 41.0 29 34.93866164932447 35.0 34.0 40.0 29.0 41.0 30 34.84255866554209 36.0 34.0 40.0 29.0 41.0 31 34.607489322860154 35.0 34.0 40.0 27.0 41.0 32 34.3254589100704 35.0 33.0 40.0 26.0 41.0 33 34.055065181449855 35.0 33.0 40.0 24.0 41.0 34 33.91176890396279 35.0 33.0 40.0 23.0 41.0 35 33.74002188002676 35.0 33.0 39.0 23.0 41.0 36 33.4928388775412 35.0 33.0 39.0 22.0 41.0 37 33.42030412789748 35.0 32.0 39.0 23.0 41.0 38 33.478148385956516 35.0 32.0 39.0 23.0 41.0 39 33.453274956765696 35.0 32.0 39.0 23.0 41.0 40 33.245337742151264 35.0 32.0 39.0 22.0 41.0 41 33.25344453815917 35.0 32.0 39.0 22.0 41.0 42 33.236838984927836 35.0 32.0 39.0 23.0 41.0 43 33.09444788727983 35.0 32.0 39.0 22.0 41.0 44 33.04262936174307 35.0 32.0 39.0 22.0 41.0 45 32.99327133246678 35.0 32.0 39.0 22.0 41.0 46 32.941612544548676 35.0 32.0 38.0 22.0 40.0 47 32.88972556003248 35.0 32.0 38.0 22.0 40.0 48 32.91439048017486 35.0 32.0 38.0 22.0 40.0 49 32.96978319085961 35.0 32.0 38.0 22.0 40.0 50 32.834136868739975 35.0 32.0 38.0 22.0 40.0 51 32.62881899311607 35.0 31.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 8.0 13 10.0 14 35.0 15 98.0 16 297.0 17 946.0 18 2016.0 19 3702.0 20 6430.0 21 9729.0 22 14499.0 23 20523.0 24 28573.0 25 39472.0 26 50288.0 27 57751.0 28 61780.0 29 68111.0 30 78961.0 31 95391.0 32 117424.0 33 150698.0 34 256263.0 35 346963.0 36 140506.0 37 163796.0 38 219053.0 39 301437.0 40 152.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.11378732524503 23.106963799518102 27.619618643214615 16.159630232022245 2 32.35545870872046 25.147130875223446 30.5989265811004 11.898483834955693 3 28.844855397185125 24.46804464599325 33.102243262048 13.584856694773626 4 25.97561875955014 27.522254761366767 31.45788542293555 15.04424105614755 5 23.11488356380444 31.953966929391054 31.18123060608569 13.74991890071882 6 21.422917650111973 39.96281737784211 27.592816729047858 11.021448242998055 7 83.82041375175342 5.516272430942564 8.819574793672242 1.8437390236317714 8 85.94085233666605 4.179487810498386 8.225100283455971 1.6545595693795963 9 81.9903665240065 5.083101594467799 9.834736444115325 3.0917954374103713 10 56.72842143884667 19.612513227572414 14.435761539029448 9.223303794551471 11 53.80226988498444 17.723313862048446 18.392780038614447 10.08163621435267 12 46.63559911674493 20.52552334205104 22.003073942409443 10.835803598794586 13 20.797211527060313 45.14225373224485 21.786466151956564 12.274068588738274 14 13.238311076707616 46.856412883711464 27.423056357848065 12.482219681732861 15 12.246640252537569 21.24103153811219 55.1020956054257 11.410232603924534 16 14.038341502920693 14.693042017257927 53.04412024618386 18.22449623363752 17 14.311774720738821 15.172344362089834 30.820366770100875 39.69551414707047 18 20.90938581556793 22.121065006946573 36.48599611170894 20.48355306577655 19 31.687827053825313 21.984281281391016 27.21231008785569 19.11558157692798 20 34.003172380157636 20.6610989679697 25.344140604899962 19.9915880469727 21 22.06857978938796 28.13064478962287 28.6336169384518 21.167158482537367 22 21.089347917034875 25.194470483217486 25.670148529138693 28.04603307060895 23 18.586568169259234 30.976256367691835 24.921887409588283 25.515288053460644 24 19.686252049854243 22.87039999284089 41.75478709481121 15.688560862493652 25 16.056449574144878 22.861540595503634 39.63484069863954 21.447169131711945 26 14.626462303935497 35.72950201685522 29.708020215533924 19.936015463675353 27 16.958810514046398 35.49589134262377 30.35037126691619 17.194926876413643 28 13.725398952532869 28.763733743788915 42.03819832074151 15.47266898293671 29 14.394551918081897 24.458290360036063 41.01068720734345 20.136470514538583 30 17.120695865390854 30.895850625191564 33.78070306924425 18.20275044017334 31 30.138506386148915 25.806395321522295 26.01342780374198 18.041670488586814 32 32.73744191613551 25.314117091701476 27.34444039258764 14.604000599575375 33 29.773302340357468 27.024472966533402 25.175185633458096 18.027039059651038 34 19.32395639207755 27.56346438231432 29.23538479092046 23.877194434687674 35 20.589642111668677 24.721924547466013 32.75099947872738 21.937433862137933 36 32.30310772445485 24.293183409659875 26.694259065781022 16.709449800104252 37 20.40605571129103 33.773499215853846 29.355702565869397 16.464742506985726 38 20.677072729835363 34.753670721257855 23.47194412315457 21.09731242575221 39 21.11225706570496 32.43528277361779 26.96585776192831 19.486602398748946 40 24.406386820080407 25.47797119800977 25.762277312559984 24.35336466934984 41 16.35238924075412 24.55059812118134 27.74669282724399 31.350319810820547 42 23.071391976876075 25.501819979730772 23.086470850121817 28.340317193271332 43 22.69240664633778 26.932433671974103 24.78112142967406 25.594038252014055 44 19.300868265683484 31.97481783423531 28.290650874865484 20.433663025215722 45 16.400936948385063 39.83994917032639 22.764310946948765 20.994802934339784 46 21.365018356402814 35.07314595857113 25.1368844005253 18.424951284500754 47 22.28894611204453 27.899047614786245 26.747907638545538 23.06409863462369 48 24.169241335800244 23.077521963922564 31.334435537816873 21.41880116246032 49 20.83573648214809 23.955362955638133 33.08958058807605 22.119319974137717 50 18.923091034782082 34.96965208967679 26.07392227444892 20.03333460109221 51 18.265705854585075 36.91254477239627 23.069915410653202 21.751833962365456 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1676.0 1 2530.5 2 3385.0 3 11292.0 4 19199.0 5 15320.5 6 11442.0 7 12152.0 8 12862.0 9 13661.5 10 14461.0 11 14757.0 12 15053.0 13 14424.0 14 13795.0 15 13182.5 16 12570.0 17 11707.5 18 10845.0 19 10754.5 20 10664.0 21 10074.5 22 9485.0 23 9187.5 24 8890.0 25 11410.0 26 13569.0 27 13208.0 28 16111.0 29 19014.0 30 23899.5 31 28785.0 32 33374.0 33 37963.0 34 42305.0 35 46647.0 36 49513.5 37 52380.0 38 68465.0 39 84550.0 40 124323.5 41 164097.0 42 205339.5 43 246582.0 44 249727.0 45 252872.0 46 235262.0 47 217652.0 48 200763.0 49 183874.0 50 172207.5 51 160541.0 52 148579.0 53 136617.0 54 123720.0 55 110823.0 56 99713.5 57 88604.0 58 82780.0 59 76956.0 60 71534.0 61 66112.0 62 52774.0 63 39436.0 64 30168.0 65 20900.0 66 16670.5 67 12441.0 68 9637.0 69 6833.0 70 5353.0 71 3873.0 72 3245.5 73 2618.0 74 2075.0 75 1254.0 76 976.0 77 643.5 78 311.0 79 279.0 80 247.0 81 191.0 82 135.0 83 91.5 84 48.0 85 34.5 86 21.0 87 12.5 88 4.0 89 3.5 90 3.0 91 2.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2234915.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.714357852074437 #Duplication Level Percentage of deduplicated Percentage of total 1 83.12633278871263 13.062769403724591 2 6.618865632535921 2.08022446248933 3 2.2819675746956416 1.0757896522679313 4 1.1151959394071138 0.7009835226809482 5 0.6754012425257124 0.5306748409392379 6 0.4396014907653111 0.4144833082914896 7 0.3064485563117056 0.33709495939936085 8 0.2544442212332374 0.31987420366811914 9 0.18931382096546742 0.26774506160954165 >10 2.2859332362610805 8.623880155132444 >50 0.9091331366160638 10.383565599961779 >100 1.7681555795469692 58.22696610532396 >500 0.026916052546929515 2.6792803482565755 >1k 0.00171804590725082 0.34669916504294157 >5k 2.8634098454180334E-4 0.43025793849975436 >10k+ 2.8634098454180334E-4 0.519711272712002 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 11550 0.5167981780067699 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9562 0.42784624918621067 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.012080996368989424 0.0 2 0.0 0.0 0.0 0.03937509927670627 0.0 3 4.474443099625713E-5 0.0 0.0 0.0570938939512241 0.0 4 4.474443099625713E-5 0.0 0.0 0.08917565097554046 0.0 5 4.474443099625713E-5 0.0 0.0 0.14953588838949133 0.0 6 4.474443099625713E-5 0.0 0.0 0.22833083137390012 0.0 7 4.474443099625713E-5 0.0 0.0 0.27786291648675676 0.0 8 4.474443099625713E-5 0.0 0.0 0.4370188575404434 0.0 9 8.948886199251425E-5 0.0 0.0 0.5197513104525228 0.0 10 8.948886199251425E-5 0.0 0.0 0.6502260712376086 0.0 11 8.948886199251425E-5 0.0 0.0 0.7375672005423025 0.0 12 8.948886199251425E-5 0.0 0.0 0.8367656040610045 0.0 13 8.948886199251425E-5 0.0 0.0 0.8757380034587445 0.0 14 8.948886199251425E-5 0.0 0.0 0.8899667325155542 0.0 15 8.948886199251425E-5 0.0 0.0 0.9120257369967091 0.0 16 8.948886199251425E-5 0.0 0.0 0.9642424879693411 0.0 17 8.948886199251425E-5 0.0 0.0 1.0206652154556213 0.0 18 8.948886199251425E-5 0.0 0.0 1.1343608146171107 0.0 19 8.948886199251425E-5 0.0 0.0 1.1685455598982513 0.0 20 8.948886199251425E-5 0.0 0.0 1.2157509345993025 0.0 21 8.948886199251425E-5 0.0 0.0 1.2636274757652977 0.0 22 8.948886199251425E-5 0.0 0.0 1.307387529279637 0.0 23 8.948886199251425E-5 0.0 0.0 1.3626021571290183 0.0 24 8.948886199251425E-5 0.0 0.0 1.4004112013208556 0.0 25 8.948886199251425E-5 0.0 0.0 1.4307031811053217 0.0 26 8.948886199251425E-5 0.0 0.0 1.4655143484204096 0.0 27 8.948886199251425E-5 0.0 0.0 1.500370260166494 0.0 28 8.948886199251425E-5 0.0 0.0 1.5359420828085184 0.0 29 8.948886199251425E-5 0.0 0.0 1.5728114939494344 0.0 30 8.948886199251425E-5 0.0 0.0 1.6262810889899615 0.0 31 8.948886199251425E-5 0.0 0.0 1.6780503956526311 0.0 32 8.948886199251425E-5 0.0 0.0 1.7239134374237945 0.0 33 8.948886199251425E-5 0.0 0.0 1.772192678468756 0.0 34 8.948886199251425E-5 0.0 0.0 1.8226643966325342 0.0 35 8.948886199251425E-5 0.0 0.0 1.8918392869527476 0.0 36 8.948886199251425E-5 0.0 0.0 1.9473671258191028 0.0 37 8.948886199251425E-5 0.0 0.0 2.0007024875666413 0.0 38 1.342332929887714E-4 0.0 0.0 2.052650771953296 0.0 39 1.342332929887714E-4 0.0 0.0 2.1065678113037856 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTCA 45 3.8562575E-10 45.000004 6 AACGTTC 40 6.8193913E-9 45.0 40 ACTATCG 40 6.8193913E-9 45.0 29 GACAACG 35 1.2126111E-7 45.0 1 ACTCTCG 25 3.8919927E-5 45.0 19 CGACACG 20 7.034719E-4 45.0 34 TATGCGT 35 1.2126111E-7 45.0 15 TACGCAA 20 7.034719E-4 45.0 30 CGTACTC 25 3.8919927E-5 45.0 12 GCGTGTT 35 1.2126111E-7 45.0 3 CAGTCGT 20 7.034719E-4 45.0 38 ATCGGGT 35 1.2126111E-7 45.0 24 TGTCGAC 25 3.8919927E-5 45.0 38 CAATACG 40 6.8193913E-9 45.0 1 CGATACA 25 3.8919927E-5 45.0 10 TCGAAAC 20 7.034719E-4 45.0 34 CGGTTGC 30 2.1664255E-6 44.999996 24 TAGCACG 30 2.1664255E-6 44.999996 1 TACTACG 30 2.1664255E-6 44.999996 12 ACGGGAT 505 0.0 43.21782 5 >>END_MODULE