SRR1545041_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545041_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	134496
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	574	0.42677849155365216	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	349	0.259487270996907	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGCAAG	60	0.0	45.000004	1
CGGGTGG	20	7.011057E-4	45.000004	6
CGGGTAC	20	7.011057E-4	45.000004	6
GTACAAG	20	7.011057E-4	45.000004	1
CCGATGG	20	7.011057E-4	45.000004	11
GGATGAC	30	2.151177E-6	45.000004	8
ACCGCTC	20	7.011057E-4	45.000004	18
CTATAGC	20	7.011057E-4	45.000004	39
GACCGCT	20	7.011057E-4	45.000004	17
CCGGAAA	20	7.011057E-4	45.000004	21
CGATTAC	20	7.011057E-4	45.000004	13
TACGGCT	20	7.011057E-4	45.000004	7
CCGCTCG	20	7.011057E-4	45.000004	19
ACGGGCT	30	2.151177E-6	45.000004	5
AATGCGG	30	2.151177E-6	45.000004	2
CGCTCGG	20	7.011057E-4	45.000004	20
CCCCGAT	20	7.011057E-4	45.000004	40
AGCATGC	20	7.011057E-4	45.000004	44
TATTAGG	20	7.011057E-4	45.000004	2
CGGGATA	20	7.011057E-4	45.000004	6