##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545040_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 198108 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.782381327356795 31.0 30.0 31.0 28.0 34.0 2 31.06136047004664 31.0 31.0 33.0 28.0 34.0 3 31.142220405031598 31.0 31.0 34.0 28.0 34.0 4 35.021392371837585 35.0 35.0 37.0 32.0 37.0 5 34.873942496012276 35.0 35.0 37.0 32.0 37.0 6 34.95017364265956 36.0 35.0 37.0 32.0 37.0 7 35.4418801865649 36.0 35.0 37.0 33.0 37.0 8 35.32949199426575 37.0 35.0 37.0 33.0 37.0 9 36.950860136895024 39.0 37.0 39.0 33.0 39.0 10 36.351500191814566 38.0 35.0 39.0 32.0 39.0 11 36.08606921477174 38.0 35.0 39.0 31.0 39.0 12 35.6543501524421 37.0 35.0 39.0 30.0 39.0 13 35.32768489914592 37.0 35.0 39.0 30.0 39.0 14 36.368198154541965 38.0 35.0 40.0 30.0 41.0 15 36.62508328790357 38.0 35.0 40.0 31.0 41.0 16 36.630575241787305 38.0 35.0 40.0 31.0 41.0 17 36.457997657843194 38.0 35.0 40.0 30.0 41.0 18 36.39211944999697 38.0 35.0 40.0 30.0 41.0 19 36.312390211399844 38.0 35.0 40.0 30.0 41.0 20 35.9940487007087 38.0 34.0 40.0 30.0 41.0 21 35.954025077230604 38.0 34.0 40.0 30.0 41.0 22 35.83745734649787 37.0 34.0 40.0 30.0 41.0 23 35.596472631090116 37.0 34.0 40.0 29.0 41.0 24 35.62784440810063 37.0 34.0 40.0 29.0 41.0 25 35.59290387061603 37.0 34.0 40.0 29.0 41.0 26 35.36010660851657 37.0 34.0 40.0 27.0 41.0 27 35.190820158701314 37.0 34.0 40.0 27.0 41.0 28 35.2120358592283 37.0 34.0 40.0 27.0 41.0 29 35.16284551860601 37.0 34.0 40.0 27.0 41.0 30 35.09288872736084 37.0 34.0 40.0 27.0 41.0 31 34.93011387727906 37.0 33.0 40.0 26.0 41.0 32 34.53799442728209 37.0 33.0 40.0 24.0 41.0 33 34.19793748864256 37.0 33.0 40.0 23.0 41.0 34 33.9059755284996 37.0 33.0 40.0 21.0 41.0 35 33.576640014537524 37.0 32.0 40.0 19.0 41.0 36 33.44261211056595 36.0 32.0 40.0 18.0 41.0 37 33.403269933571586 36.0 32.0 40.0 18.0 41.0 38 33.37686009651301 36.0 32.0 40.0 18.0 41.0 39 33.24331677670765 36.0 32.0 40.0 18.0 41.0 40 33.21983968340501 36.0 31.0 40.0 18.0 41.0 41 33.162184263129205 36.0 31.0 40.0 18.0 41.0 42 32.94356613564319 36.0 31.0 40.0 17.0 41.0 43 32.88393199668867 36.0 31.0 40.0 17.0 41.0 44 32.84736608314657 35.0 31.0 40.0 17.0 41.0 45 32.82216265875179 35.0 31.0 40.0 18.0 41.0 46 32.693545944636256 35.0 31.0 40.0 18.0 41.0 47 32.51228622771418 35.0 31.0 39.0 15.0 41.0 48 32.566211359460496 35.0 31.0 39.0 17.0 41.0 49 32.58866375916167 35.0 31.0 39.0 17.0 41.0 50 32.48194419205686 35.0 31.0 39.0 17.0 41.0 51 32.368329396086985 35.0 31.0 39.0 17.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 1.0 14 1.0 15 7.0 16 45.0 17 84.0 18 224.0 19 385.0 20 658.0 21 1121.0 22 1799.0 23 2598.0 24 3378.0 25 4287.0 26 4989.0 27 5461.0 28 5440.0 29 5739.0 30 6438.0 31 7711.0 32 9269.0 33 11217.0 34 16409.0 35 20115.0 36 15682.0 37 18476.0 38 25013.0 39 31553.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.86427605144669 22.145496395905266 25.180204736810225 16.810022815837826 2 34.14400226139278 26.612251903002402 26.54461202980193 12.699133805802894 3 28.011993458113754 26.822238375027762 32.454014981727134 12.711753185131341 4 25.216043774103014 26.403779756496455 34.07888626405799 14.30129020534254 5 24.805156783168776 29.928120015345165 30.476810628546048 14.789912572940011 6 19.618087104003877 41.76105962404345 28.97762836432653 9.643224907626143 7 80.17899327639469 4.348133341409736 13.455287015163448 2.017586367032124 8 80.70194035576554 6.734205584832516 10.513457306115855 2.0503967532860865 9 75.59563470430271 6.031053768651443 12.245340925151938 6.127970601893916 10 41.00036343812466 27.261392775657722 18.829123508389365 12.909120277828256 11 34.51703111434167 23.36503321420639 26.264966583883538 15.852969087568397 12 29.45514567811497 21.954186605286004 29.91953883740182 18.671128879197205 13 24.52046358551901 28.93472247460981 29.946291921578126 16.598522018293053 14 17.231510085407958 34.52258364124619 31.45456013891413 16.791346134431723 15 17.070486805176973 23.29941244169847 40.35475599168131 19.275344761443254 16 19.411634058190483 21.107173864760636 38.560280251176124 20.920911825872757 17 19.792234538736448 23.242877622307024 31.199648676479498 25.765239162477034 18 21.601348759262624 23.216629313303855 33.25458840632382 21.9274335211097 19 25.527490055929093 23.999030831667575 28.80348092959396 21.669998182809376 20 28.68889696529166 23.169180447028893 28.78127082197589 19.360651765703555 21 22.654309770428252 27.600096916833245 30.753932198598743 18.991661114139763 22 22.26108991055384 22.82391422860258 32.01435580592404 22.90064005491954 23 22.59424152482484 26.602156399539645 29.006905324368525 21.796696751266985 24 19.74327134694207 26.60619460092475 34.6094049710259 19.041129081107275 25 20.144567609586687 27.22151553697983 32.36668887677428 20.267227976659196 26 18.91342096230339 28.122034445857814 32.25917176489592 20.70537282694288 27 21.989520867405655 27.722757283905747 30.63783390877703 19.649887939911565 28 18.169382357098147 29.056878066509178 33.95016859490782 18.823570981484846 29 19.024976275566864 24.23879903890807 36.85868314252832 19.87754154299675 30 19.72005168897773 28.591980132049184 32.593332929513195 19.09463524945989 31 24.507339431017424 25.562319542875606 28.067518727158923 21.862822298948046 32 28.032184465039272 25.175661760251984 28.667696408019864 18.124457366688876 33 27.16699981828094 25.325579986673937 27.421911280715573 20.08550891432956 34 20.89819694308155 26.798009166717147 28.831748339289682 23.472045550911623 35 22.779998788539586 26.026712702162456 29.828679306237007 21.364609203060958 36 24.908635693662042 28.963999434651804 26.45728592484907 19.67007894683708 37 21.258101641528864 29.70248551295253 28.2017889232136 20.837623922305003 38 21.162699133805805 30.973004623740586 25.198881418216327 22.665414824237285 39 20.33587740020595 29.683808831546425 27.07815938780867 22.90215438043895 40 21.513517879136632 26.17612615341127 27.852484503402188 24.457871464049912 41 19.076968118400064 25.72940012518424 28.29315322955156 26.900478526864134 42 21.57409089991318 27.41787307933047 26.465867102792416 24.542168917963938 43 21.412058069335917 27.04989197811295 27.750519918428335 23.787530034122803 44 21.162699133805805 28.092757485815817 29.26181678680316 21.482726593575222 45 20.703353726250327 30.29408201587013 26.814161972257555 22.188402285621983 46 22.162153976618814 29.564177115512752 27.85854180547984 20.415127102388595 47 21.606396510994003 28.506168352615745 28.43348072768389 21.453954408706362 48 21.692208290427445 26.969632725584024 29.483917862983827 21.854241121004705 49 21.19954772144487 26.34825448745129 30.682758899186304 21.769438891917538 50 20.081470712944455 29.293112847537707 28.937246350475498 21.68817008904234 51 19.969410624507844 29.524804652007997 28.167968986613364 22.337815736870798 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 128.0 1 225.0 2 322.0 3 1720.5 4 3119.0 5 2280.0 6 1441.0 7 1460.5 8 1480.0 9 1501.0 10 1522.0 11 1450.5 12 1379.0 13 1331.5 14 1284.0 15 1258.0 16 1232.0 17 1182.0 18 1132.0 19 1136.0 20 1140.0 21 1115.5 22 1091.0 23 1120.0 24 1149.0 25 1249.5 26 1621.5 27 1893.0 28 2191.0 29 2489.0 30 2883.5 31 3278.0 32 3732.5 33 4187.0 34 4764.5 35 5342.0 36 5706.0 37 6070.0 38 6847.5 39 7625.0 40 9256.0 41 10887.0 42 12335.0 43 13783.0 44 14610.5 45 15438.0 46 15239.5 47 15041.0 48 15392.0 49 15743.0 50 15142.5 51 14542.0 52 13802.0 53 13062.0 54 12094.0 55 11126.0 56 10827.0 57 10528.0 58 9785.0 59 9042.0 60 8068.0 61 7094.0 62 6040.5 63 4987.0 64 4069.0 65 3151.0 66 2481.0 67 1811.0 68 1477.0 69 1143.0 70 990.0 71 837.0 72 695.5 73 554.0 74 454.5 75 255.5 76 156.0 77 114.0 78 72.0 79 63.5 80 55.0 81 40.5 82 26.0 83 19.0 84 12.0 85 9.5 86 7.0 87 5.0 88 3.0 89 1.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 198108.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.08441859995558 #Duplication Level Percentage of deduplicated Percentage of total 1 67.83914749458607 31.94166818099219 2 11.18484530114282 10.532638762695095 3 6.310169600548897 8.913320007268762 4 4.075987907116361 7.676620833080945 5 2.9814104075987906 7.018898782482283 6 2.0412101460151373 5.766551577927191 7 1.5030339415510625 4.953863549175198 8 1.0784965372327882 4.062430593413693 9 0.795471601020605 3.370888606214792 >10 2.155921010313257 13.481030548993477 >50 0.025729539655652996 0.8631655460657823 >100 0.007504449066232124 0.5456619621620531 >500 0.0 0.0 >1k 0.0010720641523188747 0.87326104952854 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1730 0.87326104952854 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 278 0.14032749813233186 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTACCCTCTCGTATGCCG 224 0.1130696387828861 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0070668524239303815 0.0 2 0.0 0.0 0.0 0.0323056110808246 0.0 3 0.0 0.0 0.0 0.05754436973771882 0.0 4 0.0 0.0 0.0 0.10398368566640419 0.0 5 0.0 0.0 0.0 0.24178730793304662 0.0 6 0.0 0.0 0.0 0.35435217154279486 0.0 7 0.0 0.0 0.0 0.449754679265855 0.0 8 0.0 0.0 0.0 0.6774082823510409 0.0 9 0.0 0.0 0.0 0.7566579845336887 0.0 10 0.0 0.0 0.0 1.0110646717951823 0.0 11 0.0 0.0 0.0 1.0898095988046923 0.0 12 0.0 0.0 0.0 1.2200415934742666 0.0 13 0.0 0.0 0.0 1.2604236073252972 0.0 14 0.0 0.0 0.0 1.2821289397702262 0.0 15 0.0 0.0 0.0 1.3124154501584995 0.0 16 0.0 0.0 0.0 1.3669311688573909 0.0 17 0.0 0.0 0.0 1.4083227330546975 0.0 18 0.0 0.0 0.0 1.4850485593716558 0.0 19 0.0 0.0 0.0 1.5259353483958245 0.0 20 0.0 0.0 0.0 1.5602600601692007 0.0 21 0.0 0.0 0.0 1.5960990974619904 0.0 22 0.0 0.0 0.0 1.6430431885638137 0.0 23 0.0 0.0 0.0 1.6869586286268097 0.0 24 0.0 0.0 0.0 1.733902719728633 0.0 25 0.0 0.0 0.0 1.767722656328871 0.0 26 0.0 0.0 0.0 1.7934661901589033 0.0 27 0.0 0.0 0.0 1.8277909019322793 0.0 28 0.0 0.0 0.0 1.8616108385325176 0.0 29 0.0 0.0 0.0 1.9065358289417893 0.0 30 0.0 0.0 0.0 1.9635754235063703 0.0 31 0.0 0.0 0.0 2.0044622125305387 0.0 32 0.0 0.0 0.0 2.052415853978638 0.0 33 0.0 0.0 0.0 2.105417247158116 0.0 34 0.0 0.0 0.0 2.15690431481818 0.0 35 0.0 0.0 0.0 2.20940093282452 0.0 36 0.0 0.0 0.0 2.262402326003998 0.0 37 0.0 0.0 0.0 2.317422819876027 0.0 38 0.0 0.0 0.0 2.374967189613746 0.0 39 0.0 0.0 0.0 2.448159589718739 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGGGAT 30 2.156381E-6 45.000004 5 CGTAAGG 30 2.156381E-6 45.000004 2 TACCGGG 35 1.205135E-7 45.000004 3 TCACGAC 50 2.1827873E-11 45.0 25 AACCGAT 20 7.0191425E-4 45.0 16 CACGGGT 20 7.0191425E-4 45.0 4 GGTCCGA 20 7.0191425E-4 45.0 38 CGACAAT 25 3.8790855E-5 45.0 20 ATCCGGG 20 7.0191425E-4 45.0 3 GTACTAG 25 3.8790855E-5 45.0 1 GCTAGCG 20 7.0191425E-4 45.0 1 CTCGAGG 20 7.0191425E-4 45.0 2 CGGTCTA 50 2.1827873E-11 45.0 31 TCGACAA 25 3.8790855E-5 45.0 19 CGTTTAT 25 3.8790855E-5 45.0 39 GACTAAA 20 7.0191425E-4 45.0 9 CGATGAA 450 0.0 43.0 19 CCGATGA 430 0.0 42.906975 18 AGGGTAA 90 0.0 42.5 6 CGTTTTT 1135 0.0 42.422905 1 >>END_MODULE