##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545037_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1898372 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.982331703164608 31.0 31.0 33.0 30.0 34.0 2 31.26434808351577 31.0 31.0 34.0 30.0 34.0 3 31.339530397624912 31.0 31.0 34.0 28.0 34.0 4 35.180996137743286 37.0 35.0 37.0 32.0 37.0 5 35.05159894899419 37.0 35.0 37.0 32.0 37.0 6 35.111185268219295 37.0 35.0 37.0 32.0 37.0 7 35.5957325539989 37.0 35.0 37.0 35.0 37.0 8 35.53515696607409 37.0 35.0 37.0 35.0 37.0 9 37.22228520016098 39.0 37.0 39.0 34.0 39.0 10 36.66773003394488 39.0 35.0 39.0 32.0 39.0 11 36.342030961265756 38.0 35.0 39.0 32.0 39.0 12 35.37539059783857 37.0 35.0 39.0 30.0 39.0 13 34.794993815753706 37.0 33.0 39.0 27.0 39.0 14 35.7180315554591 38.0 34.0 40.0 27.0 41.0 15 36.15359687142457 38.0 34.0 40.0 30.0 41.0 16 36.29428847454556 38.0 35.0 40.0 31.0 41.0 17 36.20883578139585 37.0 34.0 40.0 31.0 41.0 18 36.14703071895287 37.0 35.0 40.0 31.0 41.0 19 36.05612335200898 37.0 35.0 40.0 30.0 41.0 20 35.90413891481754 36.0 34.0 40.0 30.0 41.0 21 35.71485409603597 36.0 34.0 40.0 30.0 41.0 22 35.60213014098396 36.0 34.0 40.0 30.0 41.0 23 35.59910281019737 36.0 34.0 40.0 30.0 41.0 24 35.48062339731096 36.0 34.0 40.0 30.0 41.0 25 35.328741679712934 35.0 34.0 40.0 29.0 41.0 26 35.20143259592957 35.0 34.0 40.0 29.0 41.0 27 35.11351515930492 35.0 34.0 40.0 29.0 41.0 28 35.12829940601737 36.0 34.0 40.0 29.0 41.0 29 35.15733428432362 36.0 34.0 40.0 29.0 41.0 30 35.05732438110128 36.0 34.0 40.0 29.0 41.0 31 34.84979866959689 35.0 34.0 40.0 27.0 41.0 32 34.61520134093845 35.0 33.0 40.0 27.0 41.0 33 34.36742271799205 35.0 33.0 40.0 25.0 41.0 34 34.19755927710691 35.0 33.0 40.0 24.0 41.0 35 34.00786410671881 35.0 33.0 40.0 23.0 41.0 36 33.817622678800575 35.0 33.0 40.0 23.0 41.0 37 33.76128282549469 35.0 33.0 40.0 23.0 41.0 38 33.737906479868016 35.0 33.0 40.0 23.0 41.0 39 33.70034850914362 35.0 33.0 40.0 23.0 41.0 40 33.52452680507298 35.0 32.0 40.0 23.0 41.0 41 33.48170010935686 35.0 33.0 39.0 23.0 41.0 42 33.453078743260015 35.0 33.0 39.0 23.0 41.0 43 33.29351728744419 35.0 32.0 39.0 23.0 41.0 44 33.22732794204718 35.0 32.0 39.0 22.0 41.0 45 33.189312210673144 35.0 32.0 39.0 23.0 41.0 46 33.156293919210775 35.0 32.0 39.0 23.0 41.0 47 33.07641073509301 35.0 32.0 39.0 23.0 41.0 48 33.05285581540394 35.0 32.0 39.0 22.0 41.0 49 33.0798847644192 35.0 32.0 39.0 22.0 40.0 50 32.9751850532983 35.0 32.0 39.0 22.0 40.0 51 32.7813926880506 35.0 32.0 38.0 21.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 0.0 10 0.0 11 2.0 12 3.0 13 14.0 14 24.0 15 76.0 16 215.0 17 588.0 18 1427.0 19 2786.0 20 4718.0 21 7524.0 22 11130.0 23 16354.0 24 22344.0 25 31010.0 26 40233.0 27 45750.0 28 49344.0 29 54709.0 30 64065.0 31 77797.0 32 96285.0 33 124804.0 34 204718.0 35 272314.0 36 134510.0 37 159436.0 38 209099.0 39 267010.0 40 80.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.07208913742934 23.20936044147301 27.17286179947871 15.545688621618945 2 33.68349301401412 24.652597067381947 29.276401042577533 12.387508876026406 3 29.60578853881115 24.641798340894198 31.861510810315362 13.890902309979289 4 25.964247260284072 27.078359773532267 31.78397068646187 15.173422279721782 5 23.186867484349747 31.315622017181038 30.917544085142428 14.579966413326787 6 21.576698349954594 39.05383138815785 28.55520414333966 10.814266118547893 7 84.10337910588652 4.944868550526451 8.9639965191227 1.9877558244643305 8 85.58986331446103 3.9059783856904757 8.677066454836039 1.8270918450124634 9 80.7514544040894 5.393568805271043 10.58923119388613 3.2657455967534292 10 51.27003558838836 21.873953050297835 16.07340394822511 10.782607413088689 11 47.032351931023 20.189351718209075 20.564725986266126 12.213570364501795 12 40.895198622819976 20.448363123771315 24.680146989104347 13.976291264304361 13 21.85140741646 39.076429698710264 24.512793066901533 14.559369817928204 14 15.95403851299956 41.05185917196419 29.659571464391593 13.334530850644658 15 15.220199202263835 21.7934103537136 48.407530241701835 14.578860202320726 16 16.636781410598132 17.182406820159592 47.14428994949357 19.03652181974871 17 17.10228553729195 16.66849279277191 30.565821661929277 35.66340000800686 18 22.44623287743393 20.67403016900797 36.4007159819045 20.479020971653604 19 29.660466968539357 21.904716251609273 27.518315693657513 20.916501086193854 20 31.045285117985305 22.115739170194253 25.738211478045397 21.100764233775045 21 22.892773386880968 26.445975815066802 30.35158546375526 20.309665334296966 22 23.00634438350334 23.03436839565691 27.274211798319826 26.685075422519926 23 19.291424441574147 28.235298455729435 26.50165510237193 25.97162200032449 24 20.403324532810217 22.79711247321389 39.11994066494871 17.679622329027186 25 18.656248617236244 23.01335038654173 37.31460430305546 21.015796693166568 26 16.404213715752235 31.623254030295435 29.63270633995866 22.339825913993675 27 17.99568261647348 32.029286146234774 30.858335457960823 19.11669577933092 28 16.08820610502051 27.43524451477371 38.81625940542739 17.66028997477839 29 16.237175853836867 23.392464701333562 39.38648484069508 20.98387460413449 30 19.272250117469074 28.14590607109671 34.560454958248435 18.021388853185783 31 29.55095207893922 25.05673282159661 26.75676843105566 18.63554666840851 32 30.444770571837342 25.10224550298888 27.652114548676444 16.800869376497335 33 28.53897971525075 25.470982505009555 25.887655317292925 20.10238246244677 34 20.769743759389627 27.215003171138218 29.20628833547903 22.808964733993125 35 20.49108393929114 25.112570139045452 32.063315303849826 22.33303061781358 36 30.43112730276258 24.19736490003013 27.21047297368482 18.16103482352247 37 21.265800380536586 30.425069480586526 29.538415020870513 18.770715118006375 38 22.045257726093727 31.972606001352737 23.709736553215073 22.272399719338466 39 20.93456919929287 30.238909971280652 27.06935205534005 21.757168774086427 40 24.467965182798736 25.075538408699664 26.264135796356037 24.192360612145563 41 18.63217535867575 23.415589779031716 28.491570672133808 29.460664190158724 42 23.137193342506105 24.490826876924018 25.384540016392993 26.987439764176884 43 22.532464659192193 25.384434662963844 26.74133415368537 25.341766524158594 44 19.283154197385972 29.746277336581027 29.132646288504045 21.837922177528956 45 17.893542466913757 35.96392066465371 25.06310670406011 21.079430164372422 46 22.802485498100477 31.3337954837092 26.76983225627011 19.093886761920214 47 22.407410138792606 28.32321589235408 26.337251076185282 22.932122892668033 48 23.859285745891743 25.251162575090657 30.07224084636731 20.817310832650293 49 22.01718103722558 23.980336835983675 32.388699369775786 21.613782757014956 50 20.390155354166623 31.747149662974376 27.68872486530564 20.173970117553356 51 19.738175657879488 33.59104537993608 25.04946343498535 21.621315527199094 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1525.0 1 2376.5 2 3228.0 3 11580.5 4 19933.0 5 15005.5 6 10078.0 7 10595.0 8 11112.0 9 11759.5 10 12407.0 11 12555.5 12 12704.0 13 12164.5 14 11625.0 15 11114.5 16 10604.0 17 9559.0 18 8514.0 19 8342.0 20 8170.0 21 7615.5 22 7061.0 23 7688.5 24 8316.0 25 9799.0 26 11761.5 27 12241.0 28 15321.0 29 18401.0 30 20158.0 31 21915.0 32 28448.5 33 34982.0 34 36339.5 35 37697.0 36 41681.0 37 45665.0 38 54358.0 39 63051.0 40 90450.5 41 117850.0 42 149642.5 43 181435.0 44 186911.5 45 192388.0 46 181237.5 47 170087.0 48 161585.0 49 153083.0 50 142897.5 51 132712.0 52 126062.5 53 119413.0 54 108951.0 55 98489.0 56 94710.0 57 90931.0 58 85807.5 59 80684.0 60 71055.0 61 61426.0 62 53246.0 63 45066.0 64 38247.0 65 31428.0 66 26026.5 67 20625.0 68 16384.0 69 12143.0 70 10094.0 71 8045.0 72 6815.0 73 5585.0 74 4396.5 75 2348.5 76 1489.0 77 1121.0 78 753.0 79 632.5 80 512.0 81 389.0 82 266.0 83 194.0 84 122.0 85 86.5 86 51.0 87 46.0 88 41.0 89 31.0 90 21.0 91 12.5 92 4.0 93 3.5 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1898372.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.957301768131288 #Duplication Level Percentage of deduplicated Percentage of total 1 81.41119169710277 14.619253366080587 2 6.069696949820765 2.17990759538075 3 2.1343719952305333 1.1498268601140946 4 1.1513296895077167 0.8269909867639588 5 0.7701177409115592 0.6914618335270207 6 0.576691224156467 0.6213491003526433 7 0.44292511270715795 0.5567617936696198 8 0.3789460959636618 0.544387951925977 9 0.2980476802211019 0.481691892151964 >10 3.9328285022908083 16.44958906086821 >50 1.342165919189387 17.638601080509105 >100 1.481955150121153 42.01521047849967 >500 0.007962744090168453 0.9522034761338776 >1k 0.0011796657911360671 0.2534619486527663 >5k 2.949164477840168E-4 0.4545474102145201 >10k+ 2.949164477840168E-4 0.5647551651552654 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10664 0.5617444842212169 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 8583 0.4521242411919265 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.008480951046475612 0.0 2 0.0 0.0 0.0 0.03750582077696047 0.0 3 0.0 0.0 0.0 0.056100701021717554 0.0 4 0.0 0.0 0.0 0.08043734315508236 0.0 5 0.0 0.0 0.0 0.13427294545010146 0.0 6 0.0 0.0 0.0 0.20670342798987765 0.0 7 0.0 0.0 0.0 0.2557454492586279 0.0 8 0.0 0.0 0.0 0.40529464193530035 0.0 9 5.267671457438268E-5 0.0 0.0 0.4856793083758083 0.0 10 5.267671457438268E-5 0.0 0.0 0.6115239794940085 0.0 11 5.267671457438268E-5 0.0 0.0 0.69459515837781 0.0 12 5.267671457438268E-5 0.0 0.0 0.7833554224356448 0.0 13 5.267671457438268E-5 0.0 0.0 0.8441970277690568 0.0 14 1.0535342914876536E-4 0.0 0.0 0.8762771469448559 0.0 15 1.0535342914876536E-4 0.0 0.0 0.9010878795093902 0.0 16 1.0535342914876536E-4 0.0 0.0 0.9515521720716488 0.0 17 1.0535342914876536E-4 0.0 0.0 1.0031226756399694 0.0 18 1.0535342914876536E-4 0.0 0.0 1.103419140189594 0.0 19 1.0535342914876536E-4 0.0 0.0 1.1337609277844385 0.0 20 1.0535342914876536E-4 0.0 0.0 1.1747960884378825 0.0 21 1.0535342914876536E-4 0.0 0.0 1.2136188270792025 0.0 22 1.0535342914876536E-4 0.0 0.0 1.2527049492933946 0.0 23 1.0535342914876536E-4 0.0 0.0 1.3044334830054383 0.0 24 1.0535342914876536E-4 0.0 0.0 1.3397268817702748 0.0 25 1.0535342914876536E-4 0.0 0.0 1.3675401870655488 0.0 26 1.0535342914876536E-4 0.0 0.0 1.402517525542939 0.0 27 1.0535342914876536E-4 0.0 0.0 1.439970669605325 0.0 28 1.0535342914876536E-4 0.0 0.0 1.4734730600746324 0.0 29 1.0535342914876536E-4 0.0 0.0 1.5108208507078698 0.0 30 1.0535342914876536E-4 0.0 0.0 1.566605491442141 0.0 31 1.0535342914876536E-4 0.0 0.0 1.6119601426906844 0.0 32 1.0535342914876536E-4 0.0 0.0 1.6518364156234921 0.0 33 1.0535342914876536E-4 0.0 0.0 1.6985606614509696 0.0 34 1.5803014372314805E-4 0.0 0.0 1.7526596473188605 0.0 35 1.5803014372314805E-4 0.0 0.0 1.8133432225085495 0.0 36 1.5803014372314805E-4 0.0 0.0 1.8654931699371884 0.0 37 2.1070685829753072E-4 0.0 0.0 1.9186439749427404 0.0 38 2.1070685829753072E-4 0.0 0.0 1.973375081385524 0.0 39 2.1070685829753072E-4 0.0 0.0 2.0478072790791266 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAACG 25 3.8917708E-5 45.0 1 CGAGTTA 20 7.03445E-4 45.0 32 GTACAAC 20 7.03445E-4 45.0 19 CCGTACA 25 3.8917708E-5 45.0 33 AATCGTC 20 7.03445E-4 45.0 41 TATCTCG 30 2.1662527E-6 44.999996 20 CGTTTTT 9665 0.0 43.02121 1 CACGACG 315 0.0 42.142857 26 ACGTAAG 145 0.0 41.89655 1 ACCGGTG 65 0.0 41.538464 36 ATAGACG 115 0.0 41.086956 1 CGACGGT 320 0.0 40.78125 28 TCACGAC 330 0.0 40.227272 25 CGCGACC 965 0.0 40.103626 10 ATTCACG 45 1.929402E-8 40.000004 31 AGTTACG 45 1.929402E-8 40.000004 1 ACGTAGG 220 0.0 39.886364 2 GCGCGAC 945 0.0 39.761906 9 ACCCGCT 945 0.0 39.761906 34 TCGCCGT 85 0.0 39.705883 25 >>END_MODULE