##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545036_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2681049 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.93896866487707 31.0 31.0 33.0 28.0 34.0 2 31.208331515015203 31.0 31.0 34.0 28.0 34.0 3 31.28917449848921 31.0 31.0 34.0 28.0 34.0 4 35.11461148229667 35.0 35.0 37.0 32.0 37.0 5 34.93349356912164 35.0 35.0 37.0 32.0 37.0 6 34.99638723499645 36.0 35.0 37.0 32.0 37.0 7 35.54726825209088 37.0 35.0 37.0 35.0 37.0 8 35.487334621635036 37.0 35.0 37.0 35.0 37.0 9 37.17604004999536 39.0 37.0 39.0 34.0 39.0 10 36.63303580053927 39.0 35.0 39.0 32.0 39.0 11 36.21743504128421 38.0 35.0 39.0 31.0 39.0 12 34.69705477221789 35.0 33.0 39.0 30.0 39.0 13 33.76481257895697 35.0 33.0 39.0 24.0 39.0 14 34.62450257343301 35.0 33.0 40.0 25.0 41.0 15 35.285141375633195 35.0 33.0 40.0 30.0 41.0 16 35.62002074561114 35.0 34.0 40.0 31.0 41.0 17 35.46331603786428 35.0 34.0 40.0 30.0 41.0 18 35.46715781770494 36.0 34.0 39.0 30.0 41.0 19 35.31807102369259 36.0 34.0 39.0 29.0 41.0 20 34.89628015004575 35.0 34.0 39.0 29.0 41.0 21 34.791619250524704 35.0 34.0 39.0 29.0 41.0 22 34.63785928567512 35.0 33.0 39.0 28.0 41.0 23 34.426598320284334 35.0 33.0 39.0 27.0 41.0 24 34.52126350544134 35.0 33.0 39.0 28.0 41.0 25 34.55633373354981 35.0 34.0 38.0 29.0 41.0 26 34.283259649487945 35.0 33.0 38.0 27.0 41.0 27 34.01605901272226 35.0 33.0 38.0 25.0 41.0 28 34.15920261061995 35.0 33.0 38.0 25.0 41.0 29 34.26645391412093 35.0 33.0 38.0 27.0 41.0 30 34.3272622022201 35.0 33.0 38.0 27.0 41.0 31 34.04004701144962 35.0 33.0 38.0 26.0 41.0 32 33.56007480654028 35.0 33.0 38.0 23.0 41.0 33 33.173823753314466 35.0 32.0 38.0 23.0 41.0 34 32.860767930761426 35.0 32.0 38.0 21.0 41.0 35 32.60967740611977 35.0 32.0 38.0 18.0 41.0 36 32.325467382356685 35.0 31.0 38.0 18.0 40.0 37 32.190089028585454 35.0 31.0 38.0 18.0 40.0 38 32.27574915639364 35.0 31.0 38.0 18.0 40.0 39 32.305494603045304 35.0 31.0 38.0 18.0 40.0 40 32.10559187840282 35.0 31.0 38.0 18.0 40.0 41 32.12284072391068 35.0 31.0 38.0 18.0 40.0 42 32.12784510838854 35.0 31.0 38.0 18.0 40.0 43 31.900591895187294 35.0 31.0 38.0 17.0 40.0 44 31.97349433001784 35.0 31.0 38.0 18.0 40.0 45 32.00256988962156 35.0 31.0 37.0 18.0 40.0 46 32.010498129649996 35.0 31.0 37.0 18.0 40.0 47 31.863031969949077 35.0 31.0 37.0 18.0 40.0 48 31.977295081141747 35.0 31.0 37.0 18.0 40.0 49 32.04012832290645 35.0 31.0 37.0 18.0 40.0 50 31.806401524179527 35.0 31.0 37.0 18.0 40.0 51 31.695005201322317 35.0 31.0 37.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 3.0 13 10.0 14 21.0 15 109.0 16 372.0 17 1001.0 18 2483.0 19 5062.0 20 10220.0 21 19370.0 22 30781.0 23 42431.0 24 50053.0 25 59879.0 26 70284.0 27 76570.0 28 77884.0 29 83617.0 30 96629.0 31 117355.0 32 146616.0 33 189348.0 34 334301.0 35 474415.0 36 145390.0 37 158161.0 38 207965.0 39 280575.0 40 141.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.64779979776573 21.764950957628898 28.403844912942656 16.183404331662718 2 29.159668473049166 28.056891164615045 29.896208536285613 12.887231826050177 3 26.58056603963598 27.844884595544507 32.44718764931189 13.127361715507623 4 23.706952017661745 26.813534553079784 35.3053226554233 14.174190773835166 5 25.41777490825419 29.976662119938872 31.18559190824189 13.419971063565045 6 19.714857878390138 41.444225748951254 28.56173087474343 10.279185497915181 7 81.01205908582797 5.299343652428583 11.897395385164538 1.7912018765789062 8 83.91271476202039 7.0149780925302 7.613325978003386 1.4589811674460258 9 81.09941295366104 4.1814603164656825 9.064586286934704 5.654540442938566 10 65.0050409373346 14.759409469950008 12.24927257950153 7.986277013213858 11 62.31818217421614 14.738671318577168 15.343360005729101 7.599786501477593 12 51.04494546724062 18.332152825256085 18.71151925981211 11.911382447691183 13 22.164048475055846 49.043527365594585 19.992174704751758 8.800249454597807 14 10.975442821074886 54.255517150190094 26.11649395441859 8.652546074316433 15 8.768769239204506 18.926770827388832 60.04429609455105 12.260163838855611 16 10.216747250796237 12.47489322276467 56.945509015314535 20.362850511124563 17 11.330527715084655 15.51829153439568 29.514529574058514 43.63665117646116 18 19.442054210870445 19.265966418368333 38.75169756315532 22.540281807605904 19 30.87638457931951 19.781212503016544 26.420292952497327 22.92210996516662 20 36.370913026953254 18.31988150906604 24.860231946525406 20.448973517455293 21 20.098737471788095 30.812044091696944 29.447540869264234 19.641677567250728 22 21.693076105658644 22.391347565822183 27.074775582244115 28.840800746275058 23 19.096144829878156 30.491833606920277 23.023749286193578 27.388272277007992 24 17.38334510111527 23.144373713423366 44.129033076232474 15.343248109228888 25 12.581493288634412 24.331371787684596 42.98694279739013 20.100192126290867 26 12.39887820028653 35.53541915869498 32.08494137928848 19.980761261730017 27 16.93505042242794 38.74591624397763 28.730358900564667 15.588674433029759 28 10.390522515627278 32.31861857056697 43.77741697372931 13.51344194007644 29 11.359844598140503 21.937159671456957 46.14093215006515 20.562063580337398 30 14.448299900524011 34.73084602332893 33.79863628005307 17.02221779609399 31 30.72357125886174 25.77520962876844 24.124848147124503 19.37637096524532 32 36.30821368800048 24.25054521569729 27.0491512836953 12.392089812606931 33 34.60544734542338 26.15733617699639 22.86291671655386 16.374299761026375 34 19.806389215564504 27.158697957403987 26.61006941685885 26.42484341017266 35 21.045680254258688 24.937440531672493 31.692221962373683 22.324657251695136 36 34.96631355861083 23.428926513465438 25.91675870153809 15.688001226385643 37 19.85972654733278 34.20303023182344 29.628552107775725 16.308691113068058 38 19.058062720972277 35.23337320578624 21.508596075640543 24.19996799760094 39 20.404848997537904 34.3259298878909 26.517046126348305 18.752174988222894 40 24.09482258623397 25.124941767196347 23.3197901269242 27.460445519645482 41 15.767261247369966 22.797606459262774 26.69865414619427 34.73647814717299 42 22.526518538079685 23.348808619312813 23.469955230210264 30.654717612397235 43 24.20761425844884 24.51782865587313 24.295564907616384 26.978992178061645 44 17.72936637860778 31.65063376312779 29.514417677558296 21.105582180706133 45 15.02158296994945 42.404596111447425 21.924216976265633 20.649603942337496 46 24.046669792308904 35.956634884330725 23.532542672662828 16.464152650697546 47 21.809970649547992 29.484802403835214 25.05243283505822 23.652794111558574 48 25.28316341849776 23.15190807777105 31.009541414573178 20.55538708915801 49 22.546995597618693 20.59242483072857 35.174217256006884 21.686362315645855 50 20.002133493270733 36.260844169576906 24.697385239881854 19.03963709727051 51 17.789976982889907 37.55813489421491 21.281296984874203 23.370591138020977 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3462.0 1 3697.5 2 3933.0 3 11793.0 4 19653.0 5 15494.0 6 11335.0 7 12936.0 8 14537.0 9 16576.5 10 18616.0 11 19389.5 12 20163.0 13 19253.0 14 18343.0 15 17264.5 16 16186.0 17 15042.5 18 13899.0 19 12173.5 20 10448.0 21 9771.0 22 9094.0 23 8889.5 24 8685.0 25 8846.0 26 10582.5 27 12158.0 28 12267.0 29 12376.0 30 18299.5 31 24223.0 32 26851.0 33 29479.0 34 32835.0 35 36191.0 36 40816.0 37 45441.0 38 66929.0 39 88417.0 40 153729.0 41 219041.0 42 277207.5 43 335374.0 44 341316.5 45 347259.0 46 330270.0 47 313281.0 48 268989.5 49 224698.0 50 212253.5 51 199809.0 52 188737.0 53 177665.0 54 151600.5 55 125536.0 56 111165.0 57 96794.0 58 86339.5 59 75885.0 60 66270.0 61 56655.0 62 45919.5 63 35184.0 64 28944.5 65 22705.0 66 17248.5 67 11792.0 68 9127.5 69 6463.0 70 4617.5 71 2772.0 72 2542.5 73 2313.0 74 1793.5 75 856.0 76 438.0 77 333.0 78 228.0 79 201.5 80 175.0 81 104.5 82 34.0 83 25.0 84 16.0 85 12.0 86 8.0 87 4.0 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 1.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2681049.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.2419676901441 #Duplication Level Percentage of deduplicated Percentage of total 1 82.71076440226923 12.606747986465086 2 7.542632305115599 2.2992911578641815 3 2.5437700164688026 1.1631618120652447 4 1.2205840942736774 0.7441641331209277 5 0.7142316658465325 0.5443147987055325 6 0.45272659885364047 0.41402665153176105 7 0.3053753329828325 0.325816467108393 8 0.24347772302765006 0.2968863670125837 9 0.18524227236794613 0.25411110572529977 >10 1.7569756351710504 6.101731816104948 >50 0.6131840434666709 6.777553328192873 >100 1.6382731029673292 59.48969218277038 >500 0.06486989251094118 6.152925090590158 >1k 0.007152953927061956 1.549284161350208 >5k 2.4665358369179157E-4 0.21395234560165088 >10k+ 4.933071673835831E-4 1.066340595790762 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 17666 0.6589211909219115 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10698 0.39902291976013865 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCG 5691 0.2122676609043699 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGC 3138 0.11704373922296833 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3007 0.11215759204699353 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.017866141200701666 0.0 2 0.0 0.0 0.0 0.07359059830685676 0.0 3 0.0 0.0 0.0 0.09984897702354563 0.0 4 0.0 0.0 0.0 0.17470773566615158 0.0 5 0.0 0.0 0.0 0.35687523801318066 0.0 6 0.0 0.0 0.0 0.4686971405595347 0.0 7 3.729883340438761E-5 0.0 0.0 0.578131917768008 0.0 8 3.729883340438761E-5 0.0 0.0 0.8331813405872105 0.0 9 3.729883340438761E-5 0.0 0.0 0.93918462512248 0.0 10 3.729883340438761E-5 0.0 0.0 1.3124713498335911 0.0 11 3.729883340438761E-5 0.0 0.0 1.4238829652124971 0.0 12 7.459766680877522E-5 0.0 0.0 1.6692346913465588 0.0 13 1.1189650021316283E-4 0.0 0.0 1.7270105842899552 0.0 14 1.1189650021316283E-4 0.0 0.0 1.7525975840053651 0.0 15 1.1189650021316283E-4 0.0 0.0 1.7993703210944672 0.0 16 1.1189650021316283E-4 0.0 0.0 1.87411718323686 0.0 17 1.4919533361755044E-4 0.0 0.0 1.943120025034977 0.0 18 1.4919533361755044E-4 0.0 0.0 2.0912336924838 0.0 19 1.8649416702193805E-4 0.0 0.0 2.1800795136530513 0.0 20 1.8649416702193805E-4 0.0 0.0 2.240093336600711 0.0 21 1.8649416702193805E-4 0.0 0.0 2.29772003421049 0.0 22 1.8649416702193805E-4 0.0 0.0 2.3471409884713035 0.0 23 1.8649416702193805E-4 0.0 0.0 2.4109219935928063 0.0 24 1.8649416702193805E-4 0.0 0.0 2.4539275485080654 0.0 25 1.8649416702193805E-4 0.0 0.0 2.4885781647407414 0.0 26 3.729883340438761E-4 0.0 0.0 2.528674410650458 0.0 27 4.102871674482637E-4 0.0 0.0 2.573507608402532 0.0 28 4.102871674482637E-4 0.0 0.0 2.6081209258018037 0.0 29 4.475860008526513E-4 0.0 0.0 2.6472847008764107 0.0 30 4.475860008526513E-4 0.0 0.0 2.708790477160246 0.0 31 4.475860008526513E-4 0.0 0.0 2.771042230112169 0.0 32 4.475860008526513E-4 0.0 0.0 2.818411748535741 0.0 33 4.475860008526513E-4 0.0 0.0 2.8660796576265484 0.0 34 4.475860008526513E-4 0.0 0.0 2.921244632231638 0.0 35 4.475860008526513E-4 0.0 0.0 3.0018474112185194 0.0 36 4.475860008526513E-4 0.0 0.0 3.0648824396719343 0.0 37 4.475860008526513E-4 0.0 0.0 3.122770229115544 0.0 38 4.475860008526513E-4 0.0 0.0 3.174279918047003 0.0 39 4.475860008526513E-4 0.0 0.0 3.229668685652519 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCATA 30 2.1665892E-6 45.000004 25 ACATTCG 25 3.8922015E-5 45.000004 27 TTCGTAC 25 3.8922015E-5 45.000004 33 TCTACGA 60 0.0 45.000004 16 CGGATGG 50 2.1827873E-11 45.000004 2 CTCGCTA 25 3.8922015E-5 45.000004 11 AGCGAAT 25 3.8922015E-5 45.000004 24 ACTCGCG 30 2.1665892E-6 45.000004 1 TCGTACA 25 3.8922015E-5 45.000004 34 TCGAGGT 30 2.1665892E-6 45.000004 3 AATCGTC 50 2.1827873E-11 45.000004 29 TACCGTT 30 2.1665892E-6 45.000004 18 TACCGGC 30 2.1665892E-6 45.000004 34 AAGTCGA 25 3.8922015E-5 45.000004 11 CGTATCT 35 1.2127384E-7 45.0 43 GTATTCA 45 3.8562575E-10 45.0 25 GCGAATC 20 7.034971E-4 45.0 33 CGCATTA 45 3.8562575E-10 45.0 13 CGACACT 20 7.034971E-4 45.0 44 ACTTACG 35 1.2127384E-7 45.0 8 >>END_MODULE