##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545035_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1188855 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.952635098477106 31.0 31.0 33.0 30.0 34.0 2 31.242684768117222 31.0 31.0 34.0 30.0 34.0 3 31.31184458996261 31.0 31.0 34.0 28.0 34.0 4 35.15190330191655 35.0 35.0 37.0 32.0 37.0 5 35.015760542707056 35.0 35.0 37.0 32.0 37.0 6 35.07708761791808 37.0 35.0 37.0 32.0 37.0 7 35.58765703134529 37.0 35.0 37.0 35.0 37.0 8 35.52149252852534 37.0 35.0 37.0 35.0 37.0 9 37.20927110539132 39.0 37.0 39.0 34.0 39.0 10 36.62481126798474 39.0 35.0 39.0 32.0 39.0 11 36.30393782252672 38.0 35.0 39.0 32.0 39.0 12 35.25487717173247 37.0 35.0 39.0 30.0 39.0 13 34.625553999436434 37.0 33.0 39.0 27.0 39.0 14 35.56128039163733 37.0 33.0 40.0 27.0 41.0 15 36.047741734694306 37.0 34.0 40.0 30.0 41.0 16 36.2079395721093 37.0 34.0 40.0 31.0 41.0 17 36.121336916613046 37.0 34.0 40.0 31.0 41.0 18 36.048063052264574 37.0 35.0 40.0 31.0 41.0 19 35.94872208974181 37.0 34.0 40.0 30.0 41.0 20 35.77052121579167 36.0 34.0 40.0 30.0 41.0 21 35.57358214416392 36.0 34.0 40.0 30.0 41.0 22 35.431696043672275 35.0 34.0 40.0 30.0 41.0 23 35.44682320383899 35.0 34.0 40.0 30.0 41.0 24 35.340974298800106 35.0 34.0 40.0 29.0 41.0 25 35.19726795950726 35.0 34.0 40.0 29.0 41.0 26 35.03366852980389 35.0 34.0 40.0 29.0 41.0 27 34.93335436197013 35.0 34.0 40.0 29.0 41.0 28 34.96245378957064 35.0 34.0 40.0 29.0 41.0 29 35.06151969752409 36.0 34.0 40.0 29.0 41.0 30 34.9544915065336 36.0 34.0 40.0 29.0 41.0 31 34.74190544683751 35.0 34.0 40.0 27.0 41.0 32 34.474711381959956 35.0 33.0 40.0 26.0 41.0 33 34.23204932477047 35.0 33.0 40.0 24.0 41.0 34 34.06204204886214 35.0 33.0 40.0 24.0 41.0 35 33.877161638719606 35.0 33.0 40.0 23.0 41.0 36 33.653190675061296 35.0 33.0 40.0 23.0 41.0 37 33.579804938365065 35.0 33.0 40.0 23.0 41.0 38 33.5810313284631 35.0 33.0 40.0 23.0 41.0 39 33.54727700182108 35.0 33.0 39.0 23.0 41.0 40 33.33800253184787 35.0 32.0 39.0 22.0 41.0 41 33.342463126285374 35.0 32.0 39.0 22.0 41.0 42 33.31519823695909 35.0 32.0 39.0 22.0 41.0 43 33.14769925684798 35.0 32.0 39.0 22.0 41.0 44 33.06602907839896 35.0 32.0 39.0 22.0 41.0 45 33.04426107473157 35.0 32.0 39.0 22.0 41.0 46 33.00361440209277 35.0 32.0 39.0 22.0 41.0 47 32.920503341450384 35.0 32.0 39.0 22.0 40.0 48 32.92000538333102 35.0 32.0 39.0 22.0 40.0 49 32.949770998145276 35.0 32.0 39.0 22.0 40.0 50 32.84098313082756 35.0 32.0 38.0 21.0 40.0 51 32.64945010114774 35.0 31.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 5.0 14 16.0 15 44.0 16 154.0 17 377.0 18 943.0 19 1917.0 20 3237.0 21 5130.0 22 7449.0 23 10864.0 24 15026.0 25 20383.0 26 25870.0 27 29937.0 28 31890.0 29 34800.0 30 40745.0 31 49430.0 32 61264.0 33 78742.0 34 131484.0 35 176534.0 36 80352.0 37 93418.0 38 124698.0 39 164083.0 40 62.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.551534880199856 23.748985368274518 27.898776553911116 16.80070319761451 2 33.16274903163128 25.046031685949927 29.271862422246613 12.51935686017218 3 29.324854586976546 24.937019232791215 32.172889040295075 13.565237139937167 4 27.010022248297734 27.24932813505432 30.805270617526947 14.935378999121001 5 22.428050519197043 31.38591333678203 31.449503934457944 14.736532209562982 6 21.117377644876793 39.60718506462101 28.497083328076172 10.778353962426031 7 83.53928780212894 5.434388550327837 9.102371609658032 1.9239520378851922 8 85.51118513191264 4.134734681689524 8.516177330288386 1.83790285610945 9 81.30125204503493 5.19945662002515 10.465700190519449 3.033591144420472 10 52.83672104672142 20.571558348158522 15.56615398850154 11.02556661661851 11 48.91387090940443 19.397571613022617 19.80081675225322 11.88774072531974 12 42.89900786891589 20.28876524050452 24.119678177742447 12.692548712837143 13 20.97606520559698 41.628541748152635 24.143650823691704 13.25174222255868 14 13.933995314819722 43.69902132724344 29.63616252612808 12.730820831808757 15 13.47599160536819 21.37081477556136 51.991538076552644 13.1616555425178 16 14.972389399884763 15.856601519949868 50.59767591506114 18.573333165104238 17 15.134898705056546 16.035933734559723 30.868272413372534 37.9608951470112 18 21.41295616370373 21.08406828418941 37.02015805123417 20.482817500872688 19 30.30150859440386 22.070647808185186 27.29340415778207 20.334439439628888 20 31.713371268994116 21.154556274734933 26.211270508178035 20.92080194809291 21 21.753956538013465 26.4935589285489 30.788615937183256 20.96386859625438 22 22.0225342871923 23.401844632019888 26.76314605229401 27.812475028493804 23 18.405188185270703 29.086137502050292 25.60640279933213 26.902271513346875 24 18.99373767196168 22.768630320770825 41.25355909677799 16.984072910489502 25 17.087533803533653 23.188782483986692 38.82794789944947 20.895735813030182 26 15.643455257369485 33.438224173679714 29.341929840056192 21.57639072889461 27 17.626203363740743 33.56893818001354 30.01333215572967 18.791526300516043 28 14.45567373649436 28.918665438594278 40.08470334902069 16.540957475890668 29 15.010661518856377 23.829567104482884 40.360178491069135 20.799592885591597 30 17.620147116343034 29.56121646458147 34.47249664593243 18.346139773143065 31 29.427642563643168 26.410201412283246 25.763949346219682 18.3982066778539 32 30.201580512341707 26.070462756181367 27.70262142986319 16.025335301613737 33 28.483036198695384 26.490446690302853 24.902532268443167 20.123984842558595 34 20.01110312022913 28.277712589003706 28.772894928313374 22.93828936245379 35 20.040206753556994 24.95863667141914 31.918947222327365 23.082209352696502 36 30.77364354778337 24.21026954506647 27.131147196251852 17.8849397108983 37 21.030150859440386 31.72523142014796 29.93443271046511 17.310185009946547 38 21.55805375760711 32.80088824961833 23.023245055116057 22.617812937658506 39 21.122592746802596 31.248638395767358 26.837335082915914 20.791433774514132 40 23.38628344078967 25.593953846347954 26.924141295616373 24.095621417246004 41 18.022635224648926 24.15466982937364 28.545869765446586 29.276825180530846 42 23.233363193997587 25.33757270651173 24.470015266790316 26.959048832700372 43 23.561325813492815 25.947655517283437 26.277300427722473 24.213718241501276 44 19.25323105004395 30.712828730164738 28.431642210362075 21.60229800942924 45 17.233893115644886 38.222407274226036 23.577139348364604 20.96656026176447 46 23.044357806460837 32.16346821100976 25.796838134171114 18.995335848358295 47 22.614784813959652 28.707453810599276 26.208326499026374 22.469434876414702 48 24.555307417641345 25.19483031992968 29.791690323883063 20.458171938545913 49 21.64393471028847 24.31835673820609 32.229414016007 21.808294535498444 50 20.400637588267703 33.3929705472913 26.820428058930652 19.385963805510347 51 18.933427541626184 35.01898885902823 24.097051364548243 21.950532234797347 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1144.0 1 1551.0 2 1958.0 3 6893.5 4 11829.0 5 9068.5 6 6308.0 7 6886.0 8 7464.0 9 7869.5 10 8275.0 11 8426.5 12 8578.0 13 8207.0 14 7836.0 15 7485.0 16 7134.0 17 6637.5 18 6141.0 19 5942.5 20 5744.0 21 5304.5 22 4865.0 23 5149.0 24 5433.0 25 5377.0 26 7000.5 27 8680.0 28 9882.0 29 11084.0 30 12590.5 31 14097.0 32 16755.0 33 19413.0 34 22754.5 35 26096.0 36 26697.0 37 27298.0 38 35209.0 39 43120.0 40 61913.5 41 80707.0 42 101196.0 43 121685.0 44 122075.5 45 122466.0 46 118374.0 47 114282.0 48 103938.5 49 93595.0 50 89621.5 51 85648.0 52 79575.0 53 73502.0 54 67487.0 55 61472.0 56 56147.0 57 50822.0 58 49504.0 59 48186.0 60 41502.0 61 34818.0 62 29884.5 63 24951.0 64 20469.0 65 15987.0 66 12545.0 67 9103.0 68 7205.5 69 5308.0 70 4369.0 71 3430.0 72 2901.0 73 2372.0 74 1943.5 75 989.5 76 464.0 77 367.5 78 271.0 79 237.0 80 203.0 81 173.5 82 144.0 83 112.0 84 80.0 85 46.5 86 13.0 87 11.0 88 9.0 89 6.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1188855.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.727207866359826 #Duplication Level Percentage of deduplicated Percentage of total 1 81.06048276042436 15.180365104019442 2 5.836180497570198 2.185907306471848 3 2.0424761428989298 1.1474962587044735 4 1.1026848329721224 0.8260083231260479 5 0.7462285200260405 0.6987388305166858 6 0.5315306767064858 0.5972451282017557 7 0.4822494487826663 0.6321829969553306 8 0.40129760454142527 0.6012146925215628 9 0.3577844213295123 0.6030272906624736 >10 4.384236979762472 19.525317374301803 >50 1.8673029922768456 25.760178482192387 >100 1.184385557578246 31.018178896497915 >500 0.0022568322362390356 0.3014280348186474 >1k 4.513664472478072E-4 0.39390203091836706 >5k 4.513664472478072E-4 0.5288092500912669 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6256 0.5262206072229162 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4660 0.3919737899070955 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.411454719036384E-5 0.0 0.0 0.009084371096559294 0.0 2 8.411454719036384E-5 0.0 0.0 0.033057017045812986 0.0 3 8.411454719036384E-5 0.0 0.0 0.052066904710835214 0.0 4 8.411454719036384E-5 0.0 0.0 0.0835257453600313 0.0 5 8.411454719036384E-5 0.0 0.0 0.13643379554277013 0.0 6 8.411454719036384E-5 0.0 0.0 0.21112751344781322 0.0 7 8.411454719036384E-5 0.0 0.0 0.25797931623284587 0.0 8 8.411454719036384E-5 0.0 0.0 0.4066938356654092 0.0 9 8.411454719036384E-5 0.0 0.0 0.4772659407581244 0.0 10 8.411454719036384E-5 0.0 0.0 0.5935122449752073 0.0 11 8.411454719036384E-5 0.0 0.0 0.6722434611453878 0.0 12 8.411454719036384E-5 0.0 0.0 0.7605637356952698 0.0 13 8.411454719036384E-5 0.0 0.0 0.7953871582320804 0.0 14 8.411454719036384E-5 0.0 0.0 0.8080884548578254 0.0 15 8.411454719036384E-5 0.0 0.0 0.8286124043722741 0.0 16 8.411454719036384E-5 0.0 0.0 0.8757165507988779 0.0 17 8.411454719036384E-5 0.0 0.0 0.9282881427928553 0.0 18 8.411454719036384E-5 0.0 0.0 1.0300667448931955 0.0 19 8.411454719036384E-5 0.0 0.0 1.060432096428917 0.0 20 8.411454719036384E-5 0.0 0.0 1.105769837364523 0.0 21 8.411454719036384E-5 0.0 0.0 1.1443784145249 0.0 22 8.411454719036384E-5 0.0 0.0 1.1818093880246119 0.0 23 8.411454719036384E-5 0.0 0.0 1.2294182217343579 0.0 24 8.411454719036384E-5 0.0 0.0 1.2652510188374528 0.0 25 8.411454719036384E-5 0.0 0.0 1.2949434539956513 0.0 26 8.411454719036384E-5 0.0 0.0 1.325140576436992 0.0 27 8.411454719036384E-5 0.0 0.0 1.358449937124376 0.0 28 8.411454719036384E-5 0.0 0.0 1.3909181523398564 0.0 29 2.5234364157109153E-4 0.0 0.0 1.4278444385564262 0.0 30 2.5234364157109153E-4 0.0 0.0 1.4790701977953578 0.0 31 2.5234364157109153E-4 0.0 0.0 1.527015489693865 0.0 32 2.5234364157109153E-4 0.0 0.0 1.5689886487418567 0.0 33 2.5234364157109153E-4 0.0 0.0 1.6163451388100314 0.0 34 2.5234364157109153E-4 0.0 0.0 1.6623557961231605 0.0 35 2.5234364157109153E-4 0.0 0.0 1.7205630627788924 0.0 36 2.5234364157109153E-4 0.0 0.0 1.767162521922354 0.0 37 2.5234364157109153E-4 0.0 0.0 1.820575259388235 0.0 38 2.5234364157109153E-4 0.0 0.0 1.866838260342935 0.0 39 2.5234364157109153E-4 0.0 0.0 1.919998654167245 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGC 20 7.033384E-4 45.0 22 ATCTACG 25 3.8908875E-5 45.0 1 CATGCGA 20 7.033384E-4 45.0 24 CGACGAA 20 7.033384E-4 45.0 19 TCCGATC 20 7.033384E-4 45.0 13 CTATACG 20 7.033384E-4 45.0 1 GAATCGT 20 7.033384E-4 45.0 28 CGCGAAC 20 7.033384E-4 45.0 20 CACAACG 40 6.8157533E-9 45.0 12 ATACCGG 55 1.8189894E-12 45.0 2 TACCGGT 20 7.033384E-4 45.0 40 TATTACG 30 2.165565E-6 44.999996 1 CGAATGT 30 2.165565E-6 44.999996 32 CGTTTTT 6065 0.0 42.737015 1 ATTGCGG 250 0.0 42.300003 2 GGCACCG 550 0.0 42.136364 8 CGGGTAC 145 0.0 41.896553 6 TGTTGCG 60 3.6379788E-12 41.249996 1 GGTACCT 1220 0.0 40.573772 8 GTAGGGT 355 0.0 40.56338 4 >>END_MODULE