##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545032_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3010487 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.888390815173757 31.0 31.0 33.0 28.0 34.0 2 31.175621087219444 31.0 31.0 34.0 28.0 34.0 3 31.25474350163279 31.0 31.0 34.0 28.0 34.0 4 35.08739483013878 35.0 35.0 37.0 32.0 37.0 5 34.95503119594936 35.0 35.0 37.0 32.0 37.0 6 35.00545559572255 37.0 35.0 37.0 32.0 37.0 7 35.559312164443824 37.0 35.0 37.0 35.0 37.0 8 35.493299256897636 37.0 35.0 37.0 35.0 37.0 9 37.18110259237127 39.0 37.0 39.0 34.0 39.0 10 36.50903325608116 39.0 35.0 39.0 32.0 39.0 11 36.23218004263098 38.0 35.0 39.0 31.0 39.0 12 35.475317780810876 37.0 35.0 39.0 30.0 39.0 13 34.988123848400605 37.0 34.0 39.0 28.0 39.0 14 35.942465122752566 38.0 34.0 40.0 29.0 41.0 15 36.2913953788872 38.0 35.0 40.0 30.0 41.0 16 36.39997349266082 38.0 35.0 40.0 31.0 41.0 17 36.29306587273089 38.0 34.0 40.0 31.0 41.0 18 36.229931901383395 38.0 35.0 40.0 30.0 41.0 19 36.15912242770023 37.0 35.0 40.0 30.0 41.0 20 35.9975684997145 37.0 34.0 40.0 30.0 41.0 21 35.80875154086365 37.0 34.0 40.0 30.0 41.0 22 35.71974634004398 37.0 34.0 40.0 30.0 41.0 23 35.6944205372752 36.0 34.0 40.0 30.0 41.0 24 35.583044869484574 36.0 34.0 40.0 29.0 41.0 25 35.449965404268475 36.0 34.0 40.0 29.0 41.0 26 35.29995113747377 36.0 34.0 40.0 29.0 41.0 27 35.20247421762658 36.0 34.0 40.0 29.0 41.0 28 35.224251092929485 36.0 34.0 40.0 29.0 41.0 29 35.23638700316593 36.0 34.0 40.0 29.0 41.0 30 35.090131264476476 36.0 34.0 40.0 27.0 41.0 31 34.89876887028577 36.0 34.0 40.0 27.0 41.0 32 34.64956467176241 36.0 33.0 40.0 25.0 41.0 33 34.40753173822043 36.0 33.0 40.0 24.0 41.0 34 34.20889610219211 36.0 33.0 40.0 23.0 41.0 35 34.0101701153335 36.0 33.0 40.0 23.0 41.0 36 33.837855469895736 36.0 33.0 40.0 22.0 41.0 37 33.80122252645502 36.0 33.0 40.0 23.0 41.0 38 33.76334493389275 35.0 33.0 40.0 23.0 41.0 39 33.71421700209966 35.0 33.0 40.0 23.0 41.0 40 33.56307733599248 35.0 32.0 40.0 22.0 41.0 41 33.49576829263837 35.0 32.0 40.0 21.0 41.0 42 33.45845439624885 35.0 32.0 40.0 22.0 41.0 43 33.34947236111633 35.0 32.0 40.0 21.0 41.0 44 33.284938948415984 35.0 32.0 40.0 21.0 41.0 45 33.23956157259606 35.0 32.0 39.0 21.0 41.0 46 33.19314914829395 35.0 32.0 39.0 21.0 41.0 47 33.10482456825092 35.0 32.0 39.0 21.0 41.0 48 33.055220965910166 35.0 32.0 39.0 20.0 41.0 49 33.09209639503509 35.0 32.0 39.0 20.0 41.0 50 32.99292008236541 35.0 32.0 39.0 20.0 41.0 51 32.802748193232524 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 6.0 12 5.0 13 9.0 14 34.0 15 113.0 16 449.0 17 1228.0 18 2597.0 19 4994.0 20 8525.0 21 13245.0 22 19505.0 23 27255.0 24 37797.0 25 52211.0 26 66526.0 27 76239.0 28 80949.0 29 88290.0 30 101499.0 31 121350.0 32 149183.0 33 186941.0 34 290192.0 35 377761.0 36 222869.0 37 267981.0 38 354113.0 39 458501.0 40 117.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.44130036103793 23.020926514547313 27.03748596157366 16.500287162841097 2 33.728695722652176 24.718392738450625 28.432708727856987 13.120202811040208 3 29.254502676809434 24.59784745790299 32.53008566388096 13.617564201406616 4 26.166962355260132 26.454357716874377 32.282052704429546 15.096627223435943 5 22.75658390154151 30.849659872306372 31.73091263971577 14.662843586436347 6 19.91867096586034 39.629368935989426 30.190397766208587 10.261562331941644 7 83.84772961982563 4.788826525409344 9.469265271698566 1.8941785830664606 8 85.36662008505601 3.5925748890461904 9.191768640754802 1.8490363851430018 9 81.10049968659555 4.962685439266139 11.036719308204953 2.9000955659333525 10 46.41342081862503 23.514268621654903 17.931915998972926 12.140394560747149 11 41.65555273947371 22.29390128573882 23.178309688764642 12.872236286022826 12 36.69675371459834 22.211788325277602 26.70205850415564 14.389399455968418 13 22.67410555169313 35.38221556844457 27.31372033827085 14.629958541591442 14 17.587088069139647 37.882608362035775 30.766185005947545 13.764118562877037 15 16.11742551952558 23.453912938338547 45.42211941124476 15.006542130891114 16 18.523149244623877 19.236156807852016 44.08030992992163 18.160384017602468 17 18.62851425699563 18.63103876548877 32.06255333439407 30.67789364312153 18 22.116919953482608 22.34392641456349 36.18441135935814 19.35474227259576 19 29.016733837415675 23.584224080688607 27.819585336193114 19.579456745702608 20 29.544156809180706 23.6993881720798 27.457650539597083 19.29880447914241 21 22.83799930044541 27.33823464442796 31.029198930272745 18.794567124853888 22 22.383388468377376 24.0784630526556 28.683996974575876 24.85415150439115 23 19.7952357874324 29.31658565541057 27.750726045320906 23.137452511836123 24 19.571484613618992 24.608011926309597 38.692576981730866 17.127926478340548 25 19.670006879285644 25.001835251240085 35.73793874545879 19.590219124015483 26 17.649204264957795 30.73310065780055 30.08220929039056 21.535485786851098 27 18.425922450420813 31.53539610036516 31.137188102788688 18.901493346425347 28 16.26637152062108 28.226230506891408 37.96176499018265 17.545632982304856 29 17.887139190436628 25.34935377565158 37.43497314554091 19.328533888370885 30 19.384205944088116 28.88369888327038 33.64183270015781 18.090262472483687 31 27.7690287318962 26.125872657812504 27.834001608377644 18.271097001913645 32 28.451410021036466 25.64585065472796 28.919340957127538 16.983398367108045 33 26.8694400606945 26.399150702195357 26.957532120218424 19.77387711689172 34 20.216164361447166 27.628287383403418 29.6822739975293 22.473274257620112 35 20.41696243830317 25.649172376429462 32.42196362249696 21.511901562770408 36 28.485225147957788 26.375898650284824 27.05734985734866 18.08152634440873 37 20.33750685520316 31.275803549392506 29.69762035179026 18.689069243614075 38 21.367307017103876 32.4589011678177 25.225852162789607 20.947939652288817 39 20.567237128079277 30.47556757428283 27.51694327196895 21.440252025668936 40 23.900850593276104 25.61446038464873 27.516976489185968 22.9677125328892 41 18.81728770129218 25.152342461535294 28.891338843183846 27.139030993988676 42 21.816835614968607 26.29481542355107 26.106805975245866 25.781542986234452 43 21.435701266937873 26.915645209562438 27.18882360229425 24.45982992120544 44 19.856787290561297 29.00560606971563 29.82411151418359 21.31349512553949 45 18.314478687335306 34.6592096228949 26.049008017639668 20.977303672130123 46 21.37225638243912 31.452286623393487 27.241207153526986 19.9342498406404 47 21.257092291047925 29.229191157443964 27.341921755516633 22.171794795991477 48 21.57172577061452 27.422108117390977 30.70775592121806 20.29841019077644 49 21.74415634413967 26.137000425512554 31.383958807993523 20.73488442235426 50 20.499440788151553 31.633320456125535 28.087382539768484 19.779856215954428 51 18.963244152856333 33.08574327010879 26.348527663464417 21.602484913570464 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2504.0 1 3527.0 2 4550.0 3 20308.0 4 36066.0 5 27043.0 6 18020.0 7 18901.0 8 19782.0 9 20686.5 10 21591.0 11 21691.5 12 21792.0 13 21121.0 14 20450.0 15 19008.5 16 17567.0 17 16527.5 18 15488.0 19 15200.5 20 14913.0 21 14807.5 22 14702.0 23 16107.0 24 17512.0 25 19134.5 26 22943.0 27 25129.0 28 30223.5 29 35318.0 30 42296.5 31 49275.0 32 57967.5 33 66660.0 34 70998.5 35 75337.0 36 83886.0 37 92435.0 38 110510.0 39 128585.0 40 164554.0 41 200523.0 42 234142.5 43 267762.0 44 271219.0 45 274676.0 46 265210.5 47 255745.0 48 246344.5 49 236944.0 50 225079.0 51 213214.0 52 200718.5 53 188223.0 54 171300.0 55 154377.0 56 145066.0 57 135755.0 58 122209.5 59 108664.0 60 99173.5 61 89683.0 62 76265.0 63 62847.0 64 52713.5 65 42580.0 66 33309.0 67 24038.0 68 18903.0 69 13768.0 70 11884.0 71 10000.0 72 8129.5 73 6259.0 74 4992.5 75 2647.0 76 1568.0 77 1241.5 78 915.0 79 643.0 80 371.0 81 302.5 82 234.0 83 165.0 84 96.0 85 75.0 86 54.0 87 36.0 88 18.0 89 11.5 90 5.0 91 5.0 92 5.0 93 3.5 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3010487.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.939976250469364 #Duplication Level Percentage of deduplicated Percentage of total 1 81.16032886608856 14.560143723379118 2 6.289334664776862 2.2566102903470124 3 2.324143455765219 1.2508523519733548 4 1.3137169534148714 0.9427220377640704 5 0.8769377848339166 0.7866121516529838 6 0.6340148959799033 0.6824527305793963 7 0.46802394318644247 0.587743689779106 8 0.3834918572400677 0.5503867848908162 9 0.30030778483676157 0.48487630750223093 >10 3.57837464024126 15.105569313638101 >50 1.2014272034900193 15.571186826379973 >100 1.457585068933519 44.607414260316006 >500 0.009701057925140845 1.1177175504433556 >1k 0.0022387056750325027 0.5650504672456335 >5k 1.8655880625270853E-4 0.27163120252120837 >10k+ 1.8655880625270853E-4 0.6590303115876187 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19691 0.6540802202434357 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 8116 0.2695909332941813 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.643443403010875E-5 0.0 0.0 0.010994898831982998 0.0 2 6.643443403010875E-5 0.0 0.0 0.0444114191491277 0.0 3 6.643443403010875E-5 0.0 0.0 0.06593617577488294 0.0 4 6.643443403010875E-5 0.0 0.0 0.09227742886782106 0.0 5 6.643443403010875E-5 0.0 0.0 0.1606052442677879 0.0 6 6.643443403010875E-5 0.0 0.0 0.24554166817528195 0.0 7 6.643443403010875E-5 0.0 0.0 0.3006158139862421 0.0 8 6.643443403010875E-5 0.0 0.0 0.4527174506981761 0.0 9 6.643443403010875E-5 0.0 0.0 0.516760245103201 0.0 10 6.643443403010875E-5 0.0 0.0 0.6234539461555556 0.0 11 6.643443403010875E-5 0.0 0.0 0.7136386903514282 0.0 12 6.643443403010875E-5 0.0 0.0 0.7961502574168232 0.0 13 6.643443403010875E-5 0.0 0.0 0.8363763072220541 0.0 14 6.643443403010875E-5 0.0 0.0 0.8526527435594308 0.0 15 6.643443403010875E-5 0.0 0.0 0.8763034020741495 0.0 16 6.643443403010875E-5 0.0 0.0 0.9292848632131612 0.0 17 6.643443403010875E-5 0.0 0.0 0.9857209149217385 0.0 18 6.643443403010875E-5 0.0 0.0 1.0895247180937835 0.0 19 6.643443403010875E-5 0.0 0.0 1.1236387999682445 0.0 20 6.643443403010875E-5 0.0 0.0 1.165060669586017 0.0 21 9.965165104516312E-5 0.0 0.0 1.2155840566659148 0.0 22 9.965165104516312E-5 0.0 0.0 1.2651441444523759 0.0 23 9.965165104516312E-5 0.0 0.0 1.3285225945170998 0.0 24 9.965165104516312E-5 0.0 0.0 1.3753588705083264 0.0 25 9.965165104516312E-5 0.0 0.0 1.4168803917771444 0.0 26 9.965165104516312E-5 0.0 0.0 1.461325028143287 0.0 27 9.965165104516312E-5 0.0 0.0 1.50885886569183 0.0 28 9.965165104516312E-5 0.0 0.0 1.558252867393216 0.0 29 9.965165104516312E-5 0.0 0.0 1.611566500702378 0.0 30 9.965165104516312E-5 0.0 0.0 1.683647861625046 0.0 31 9.965165104516312E-5 0.0 0.0 1.7455315369240922 0.0 32 1.328688680602175E-4 0.0 0.0 1.8062193924105967 0.0 33 1.328688680602175E-4 0.0 0.0 1.8720226993174194 0.0 34 1.6608608507527188E-4 0.0 0.0 1.942011375568139 0.0 35 1.9930330209032624E-4 0.0 0.0 2.0286750947604157 0.0 36 1.9930330209032624E-4 0.0 0.0 2.0942126639311183 0.0 37 1.9930330209032624E-4 0.0 0.0 2.1635702130585517 0.0 38 1.9930330209032624E-4 0.0 0.0 2.2369138282277916 0.0 39 2.9895495313548936E-4 0.0 0.0 2.340186155927596 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGATA 20 7.035108E-4 45.000004 11 CGTAGTA 45 3.8562575E-10 45.0 25 GTACGAC 25 3.8923168E-5 45.0 9 CGTTTTT 17735 0.0 42.932056 1 CGGTCTA 555 0.0 42.162163 31 TGTTACG 120 0.0 41.249996 1 TACGGGT 325 0.0 40.846153 4 GCGTAGT 50 1.0822987E-9 40.5 24 CGACGGT 585 0.0 40.384613 28 TAGGGTA 1685 0.0 40.326412 5 CTAGACG 90 0.0 40.0 1 AGGGTAC 1660 0.0 39.578312 6 GCGTAAG 205 0.0 39.512196 1 TCACGAC 605 0.0 39.421486 25 AATCGGC 40 3.4607183E-7 39.375004 30 GACGGTC 605 0.0 39.049583 29 CGAGGGA 1085 0.0 38.986176 4 AGTACGG 310 0.0 38.467743 2 ACTCGAC 65 9.094947E-12 38.07692 44 CCGCTCG 290 0.0 38.017242 19 >>END_MODULE