##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545028_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 772688 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.881520096080177 31.0 31.0 33.0 28.0 34.0 2 31.134015281717847 31.0 31.0 34.0 28.0 34.0 3 31.212880231089393 31.0 31.0 34.0 28.0 34.0 4 35.06089780092353 35.0 35.0 37.0 32.0 37.0 5 34.90000362371358 35.0 35.0 37.0 32.0 37.0 6 34.975952777835296 36.0 35.0 37.0 32.0 37.0 7 35.493362133228416 37.0 35.0 37.0 35.0 37.0 8 35.43923161741867 37.0 35.0 37.0 35.0 37.0 9 37.118916043733044 39.0 37.0 39.0 34.0 39.0 10 36.518536589153705 38.0 35.0 39.0 32.0 39.0 11 36.18316836808647 38.0 35.0 39.0 31.0 39.0 12 35.13196270681051 37.0 34.0 39.0 30.0 39.0 13 34.516819207752675 37.0 33.0 39.0 26.0 39.0 14 35.42970513324912 37.0 33.0 40.0 27.0 41.0 15 35.88077076387882 37.0 34.0 40.0 30.0 41.0 16 36.075541486343774 37.0 34.0 40.0 31.0 41.0 17 35.95725441575384 37.0 34.0 40.0 30.0 41.0 18 35.922882198248196 37.0 34.0 40.0 30.0 41.0 19 35.81527472925683 36.0 34.0 40.0 30.0 41.0 20 35.598750077651005 36.0 34.0 40.0 30.0 41.0 21 35.45118728387137 36.0 34.0 40.0 29.0 41.0 22 35.313561230406066 35.0 34.0 40.0 29.0 41.0 23 35.26120504006792 35.0 34.0 40.0 29.0 41.0 24 35.20323597622844 35.0 34.0 40.0 29.0 41.0 25 35.094877880852295 35.0 34.0 40.0 29.0 41.0 26 34.912872983662226 35.0 34.0 40.0 28.0 41.0 27 34.78604300830348 35.0 33.0 40.0 27.0 41.0 28 34.806307332325595 35.0 33.0 40.0 27.0 41.0 29 34.84888726109374 36.0 34.0 40.0 27.0 41.0 30 34.7739178038225 36.0 34.0 40.0 27.0 41.0 31 34.62040435466838 35.0 33.0 40.0 27.0 41.0 32 34.35737839852567 35.0 33.0 40.0 25.0 41.0 33 34.08318752200112 35.0 33.0 40.0 24.0 41.0 34 33.903332263475036 35.0 33.0 40.0 23.0 41.0 35 33.7255062845547 35.0 33.0 40.0 23.0 41.0 36 33.54265757977347 35.0 33.0 40.0 22.0 41.0 37 33.470807104549316 35.0 32.0 40.0 22.0 41.0 38 33.483653169196366 35.0 32.0 40.0 23.0 41.0 39 33.415352639098835 35.0 32.0 39.0 22.0 41.0 40 33.27822096370075 35.0 32.0 39.0 22.0 41.0 41 33.258172768310104 35.0 32.0 39.0 22.0 41.0 42 33.221559025117514 35.0 32.0 39.0 22.0 41.0 43 33.07932309030294 35.0 32.0 39.0 21.0 41.0 44 33.055171039281056 35.0 32.0 39.0 21.0 41.0 45 33.01187025034684 35.0 32.0 39.0 22.0 41.0 46 32.94772534321744 35.0 32.0 39.0 21.0 41.0 47 32.850620172695834 35.0 32.0 39.0 21.0 40.0 48 32.89093528047543 35.0 32.0 39.0 21.0 40.0 49 32.92260136044561 35.0 32.0 39.0 21.0 40.0 50 32.80408004265629 35.0 32.0 39.0 20.0 40.0 51 32.63987534425279 35.0 31.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 5.0 14 11.0 15 32.0 16 115.0 17 317.0 18 680.0 19 1353.0 20 2356.0 21 3902.0 22 5784.0 23 8179.0 24 10903.0 25 13946.0 26 17275.0 27 19447.0 28 21144.0 29 23465.0 30 27005.0 31 32815.0 32 39863.0 33 51137.0 34 84982.0 35 109651.0 36 51661.0 37 60399.0 38 80171.0 39 106043.0 40 45.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.22146066717744 22.794840867206428 26.319937672126397 15.66376079348974 2 31.672680305634355 26.06847783322635 29.616093429689606 12.642748431449693 3 28.680398815563336 25.856361170355953 32.30786552916572 13.155374484914997 4 26.743135651129563 27.377673782949906 31.854901331455903 14.024289234464622 5 23.442450251589257 30.934219245025158 31.194350112852792 14.42898039053279 6 20.725441575383595 40.48373987948564 28.64830306669704 10.142515478433728 7 83.50149089930218 5.479702027208912 9.200867620566127 1.817939452922784 8 85.2522622326217 5.050939059491023 7.914319880728056 1.7824788271592156 9 80.60795560433189 5.916488932143374 9.639207545607025 3.836347917917711 10 53.21073965170936 21.44293686455594 15.293365498105317 10.052957985629387 11 49.67503054272876 19.478107593232973 19.47979003168161 11.367071832356658 12 43.40147640444785 20.196120555774126 23.407766135878905 12.994636903899115 13 22.3181931128735 40.81996873252852 22.827454289441533 14.03438386515644 14 14.654815397676682 44.12544261073033 27.408863603420784 13.810878388172199 15 13.920366305675772 22.37889031536662 49.806907833433414 13.893835545524198 16 15.49939949889218 17.223251817033525 48.04643012444868 19.230918559625618 17 15.34021493798273 18.157911084422174 30.26771478268072 36.234159194914376 18 22.27923819187046 21.974069740956246 34.690845464145944 21.055846603027355 19 30.021302259126582 23.52476031723024 26.29030087176195 20.163636551881226 20 32.76471227714162 22.503520178907916 25.253271695690888 19.478495848259584 21 22.898116704284266 28.159231151512643 28.1341239931253 20.808528151077795 22 22.062721305365166 24.946291387985838 26.854435425423972 26.136551881225024 23 20.13154080301493 29.343150145983888 25.72720166483756 24.798107386163625 24 19.905705795871036 24.15658066386433 39.018594827407696 16.919118712856935 25 17.203709647360903 25.488683660157786 36.70834800074545 20.599258691735862 26 15.724457995982855 33.78077568177583 29.00562710951898 21.489139212722343 27 18.74016420599259 33.10508251713499 29.312477998881825 18.8422752779906 28 15.358074669206717 29.405529786925644 38.82537324249891 16.411022301368728 29 16.456965812850726 25.25508355248173 38.43012962541155 19.857821009256 30 18.51316443376887 30.417710641293773 32.54379516700143 18.525329757935932 31 29.180859544861576 27.01672602654629 25.398479075642435 18.403935352949702 32 32.424859710517055 26.218214855154994 26.031852442382952 15.325072991945001 33 29.291512227444972 26.504099973080987 24.96725715942269 19.237130640051355 34 20.18240221150063 27.640651854306007 28.813958544716627 23.362987389476736 35 20.85201271405794 25.111040937610007 31.470787691797987 22.566158656534075 36 30.032561654898227 26.764748514277432 25.679705133249126 17.522984697575218 37 20.488735427494667 33.34204750170832 28.76555608473278 17.40366098606423 38 20.759219762698528 34.45685710144327 22.977450148054583 21.806472987803616 39 21.25230364649121 33.02950220528855 26.34879796243762 19.36939618578262 40 24.053693081813098 26.25807570455346 25.610466320170627 24.07776489346282 41 17.1251527136438 25.449081647443727 27.085706002940384 30.34005963597209 42 22.42573975524403 26.4541444929907 23.481016917565693 27.639098834199572 43 22.13403081191891 27.03199739092622 25.75890915867724 25.075062638477625 44 19.823783985256664 30.381473505476986 28.12920609612159 21.66553641314476 45 17.531008634791792 37.67329116020955 23.166400927670676 21.629299277327977 46 21.526799950303356 34.0702845132835 24.86669910753111 19.53621642888203 47 21.434654090654963 28.680139978878927 27.4324177417017 22.452788188764416 48 23.6845919698507 24.943055929430766 30.227853933282255 21.144498167436275 49 20.432309030294245 25.526603234423206 32.3761984138488 21.664889321433748 50 19.313875716977616 33.72150208104694 26.896496386639885 20.068125815335556 51 18.88990122792123 33.95574928043402 24.48452674300623 22.66982274863852 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 861.0 1 1144.5 2 1428.0 3 4320.0 4 7212.0 5 5510.0 6 3808.0 7 3980.5 8 4153.0 9 4403.0 10 4653.0 11 4738.5 12 4824.0 13 4577.0 14 4330.0 15 4243.0 16 4156.0 17 3845.5 18 3535.0 19 3302.5 20 3070.0 21 3193.5 22 3317.0 23 3177.0 24 3037.0 25 3408.0 26 4848.5 27 5918.0 28 7698.0 29 9478.0 30 10220.0 31 10962.0 32 13155.5 33 15349.0 34 17438.0 35 19527.0 36 19689.5 37 19852.0 38 24547.5 39 29243.0 40 40121.0 41 50999.0 42 64385.0 43 77771.0 44 78345.0 45 78919.0 46 74242.0 47 69565.0 48 65422.5 49 61280.0 50 57455.0 51 53630.0 52 50212.0 53 46794.0 54 42924.5 55 39055.0 56 36646.0 57 34237.0 58 31808.5 59 29380.0 60 27936.5 61 26493.0 62 21548.5 63 16604.0 64 13613.0 65 10622.0 66 8328.0 67 6034.0 68 4783.5 69 3533.0 70 2812.0 71 2091.0 72 1740.5 73 1390.0 74 1126.0 75 643.5 76 425.0 77 376.0 78 327.0 79 224.5 80 122.0 81 76.5 82 31.0 83 20.5 84 10.0 85 11.5 86 13.0 87 9.5 88 6.0 89 4.5 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 772688.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.467259062675296 #Duplication Level Percentage of deduplicated Percentage of total 1 78.85613056893051 16.9282498360338 2 5.7701036028691925 2.477366177225381 3 2.19776882130211 1.415402179402888 4 1.372176849977298 1.1782750367307355 5 0.9415656260929904 1.0106416609924145 6 0.7473736003473652 0.9626437617156745 7 0.6138906447070743 0.9224984654255666 8 0.5430276384097551 0.9325851993547984 9 0.47579024691835997 0.9192521241081612 >10 6.089072797573071 31.268462401712743 >50 2.006007150102242 30.097964969678063 >100 0.38347476629546917 10.697914707045047 >500 0.0024117909829903723 0.35349068439128883 >1k 0.0012058954914951861 0.8352527961834446 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3764 0.4871306400513532 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2689 0.3480059221833392 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 800 0.10353467376224298 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 787 0.10185223531360653 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.010871140745035512 0.0 2 0.0 0.0 0.0 0.04257863458472242 0.0 3 0.0 0.0 0.0 0.06367382436377943 0.0 4 0.0 0.0 0.0 0.09991096018056447 0.0 5 0.0 0.0 0.0 0.17846789389766632 0.0 6 0.0 0.0 0.0 0.2641428364359224 0.0 7 0.0 0.0 0.0 0.32199283540057566 0.0 8 0.0 0.0 0.0 0.4942486488725074 0.0 9 0.0 0.0 0.0 0.5708643074565672 0.0 10 0.0 0.0 0.0 0.7237073695980784 0.0 11 0.0 0.0 0.0 0.8003230281821382 0.0 12 0.0 0.0 0.0 0.9057989770774232 0.0 13 0.0 0.0 0.0 0.9803439421862382 0.0 14 0.0 0.0 0.0 1.0170987513718344 0.0 15 0.0 0.0 0.0 1.046347296709668 0.0 16 0.0 0.0 0.0 1.0908672064274325 0.0 17 0.0 0.0 0.0 1.1410815232021203 0.0 18 0.0 0.0 0.0 1.242933758515727 0.0 19 0.0 0.0 0.0 1.2773590375416728 0.0 20 0.0 0.0 0.0 1.3152786118070943 0.0 21 0.0 0.0 0.0 1.3502215642018511 0.0 22 0.0 0.0 0.0 1.3860704449920278 0.0 23 0.0 0.0 0.0 1.4280019878657362 0.0 24 0.0 0.0 0.0 1.461780175180668 0.0 25 0.0 0.0 0.0 1.4890874453854597 0.0 26 0.0 0.0 0.0 1.5193713374609157 0.0 27 0.0 0.0 0.0 1.5515965046694138 0.0 28 0.0 0.0 0.0 1.5809744683494502 0.0 29 0.0 0.0 0.0 1.612681962189137 0.0 30 0.0 0.0 0.0 1.6584960553289296 0.0 31 0.0 0.0 0.0 1.7059925869173587 0.0 32 0.0 0.0 0.0 1.7457240179736193 0.0 33 0.0 0.0 0.0 1.787396724162922 0.0 34 0.0 0.0 0.0 1.8334696539871203 0.0 35 0.0 0.0 0.0 1.8908019795829623 0.0 36 0.0 0.0 0.0 1.9394632762512165 0.0 37 0.0 0.0 0.0 1.98670097115524 0.0 38 0.0 0.0 0.0 2.0378212163253475 0.0 39 0.0 0.0 0.0 2.097353653738637 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATTAG 30 2.1645737E-6 45.000004 1 TCACGAT 25 3.889614E-5 45.0 28 CTATGCG 25 3.889614E-5 45.0 1 TCCGCAA 25 3.889614E-5 45.0 32 CACGGGC 35 1.2112287E-7 45.0 4 TCCGATT 20 7.03185E-4 45.0 35 CTATCGG 20 7.03185E-4 45.0 2 GCGAAGT 40 6.8102963E-9 45.0 43 TTTGTCG 25 3.889614E-5 45.0 1 CGTTGGC 25 3.889614E-5 45.0 26 CGCATCG 35 1.2112287E-7 45.0 21 GAGTACG 25 3.889614E-5 45.0 1 ATTCGAT 50 2.1827873E-11 45.0 14 TATGCGT 40 6.8102963E-9 45.0 20 CATTCGG 25 3.889614E-5 45.0 45 GTTACGT 40 6.8102963E-9 45.0 25 ACGATTG 25 3.889614E-5 45.0 1 GTATGCG 25 3.889614E-5 45.0 1 GTATAGA 25 3.889614E-5 45.0 9 GAGCACG 20 7.03185E-4 45.0 1 >>END_MODULE